RNA–Protein interactions for RNA: ENST00000314475.6

TMEM136-201, Transcript of transmembrane protein 136, humanhuman

TSL 2 BASIC

Gene TMEM136, Length 1,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM136-201ENST00000314475 TRPM3Q9HCF6 1732 aaPredicted RBP17.23■□□□□ 0.35
TMEM136-201ENST00000314475 SSH2Q76I76 1423 aa17.22■□□□□ 0.35
TMEM136-201ENST00000314475 DDX17Q92841 729 aaKnown RBP17.21■□□□□ 0.35
TMEM136-201ENST00000314475 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
TMEM136-201ENST00000314475 PHLPP1O60346 1717 aa17.21■□□□□ 0.35
TMEM136-201ENST00000314475 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
TMEM136-201ENST00000314475 SBNO1A3KN83 1393 aa17.21■□□□□ 0.35
TMEM136-201ENST00000314475 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.34
TMEM136-201ENST00000314475 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.34
TMEM136-201ENST00000314475 TTC21AQ8NDW8 1320 aa17.2■□□□□ 0.34
TMEM136-201ENST00000314475 KNSTRNQ9Y448 316 aa17.2■□□□□ 0.34
TMEM136-201ENST00000314475 TTC21BQ7Z4L5 1316 aa17.19■□□□□ 0.34
TMEM136-201ENST00000314475 CGNL1Q0VF96 1302 aa17.19■□□□□ 0.34
TMEM136-201ENST00000314475 KIF20BQ96Q89 1820 aa17.18■□□□□ 0.34
TMEM136-201ENST00000314475 PER1O15534 1290 aaPredicted RBP17.18■□□□□ 0.34
TMEM136-201ENST00000314475 PAK3O75914 559 aaPredicted RBP17.18■□□□□ 0.34
TMEM136-201ENST00000314475 COL16A1Q07092 1604 aaPredicted RBP17.18■□□□□ 0.34
TMEM136-201ENST00000314475 ALS2Q96Q42 1657 aa17.18■□□□□ 0.34
TMEM136-201ENST00000314475 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
TMEM136-201ENST00000314475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.17■□□□□ 0.34
TMEM136-201ENST00000314475 SPATA31A3Q5VYP0 1347 aa17.16■□□□□ 0.34
TMEM136-201ENST00000314475 ARHGEF10O15013 1369 aa17.16■□□□□ 0.34
TMEM136-201ENST00000314475 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
TMEM136-201ENST00000314475 FBXO41Q8TF61 875 aa17.15■□□□□ 0.34
TMEM136-201ENST00000314475 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
TMEM136-201ENST00000314475 NSD2O96028 1365 aa17.15■□□□□ 0.34
TMEM136-201ENST00000314475 NPC1L1Q9UHC9 1359 aa17.14■□□□□ 0.33
TMEM136-201ENST00000314475 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
TMEM136-201ENST00000314475 ANKRD26Q9UPS8 1709 aa17.14■□□□□ 0.33
TMEM136-201ENST00000314475 NME9Q86XW9 330 aa17.13■□□□□ 0.33
TMEM136-201ENST00000314475 ABTB2Q8N961 1025 aa17.13■□□□□ 0.33
TMEM136-201ENST00000314475 FYB1O15117 783 aa17.13■□□□□ 0.33
TMEM136-201ENST00000314475 KCNA4P22459 653 aa17.13■□□□□ 0.33
TMEM136-201ENST00000314475 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
TMEM136-201ENST00000314475 LMOD2Q6P5Q4 547 aa17.13■□□□□ 0.33
TMEM136-201ENST00000314475 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
TMEM136-201ENST00000314475 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
TMEM136-201ENST00000314475 OVOS2A0A0J9YW53 1432 aa17.11■□□□□ 0.33
TMEM136-201ENST00000314475 OVOS2Q6IE36 1432 aa17.11■□□□□ 0.33
TMEM136-201ENST00000314475 NLRP6P59044 892 aa17.11■□□□□ 0.33
TMEM136-201ENST00000314475 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
TMEM136-201ENST00000314475 GGNBP2Q9H3C7 697 aa17.11■□□□□ 0.33
TMEM136-201ENST00000314475 HSPA1LP34931 641 aa17.1■□□□□ 0.33
TMEM136-201ENST00000314475 COG3Q96JB2 828 aa17.1■□□□□ 0.33
TMEM136-201ENST00000314475 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
TMEM136-201ENST00000314475 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
TMEM136-201ENST00000314475 PNPLA6Q8IY17 1366 aa17.09■□□□□ 0.33
TMEM136-201ENST00000314475 NUTM2GQ5VZR2 741 aa17.09■□□□□ 0.33
TMEM136-201ENST00000314475 SHPRHQ149N8 1683 aa17.09■□□□□ 0.33
TMEM136-201ENST00000314475 CC2D1BQ5T0F9 858 aaKnown RBP17.08■□□□□ 0.32
TMEM136-201ENST00000314475 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
TMEM136-201ENST00000314475 JCADQ9P266 1359 aa17.07■□□□□ 0.32
TMEM136-201ENST00000314475 USP19O94966 1318 aa17.07■□□□□ 0.32
TMEM136-201ENST00000314475 CRYBG1Q9Y4K1 1723 aa17.07■□□□□ 0.32
TMEM136-201ENST00000314475 SLIT3O75094 1523 aa17.06■□□□□ 0.32
TMEM136-201ENST00000314475 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
TMEM136-201ENST00000314475 PHRF1Q9P1Y6 1649 aaKnown RBP17.06■□□□□ 0.32
TMEM136-201ENST00000314475 ABCA3Q99758 1704 aa17.06■□□□□ 0.32
TMEM136-201ENST00000314475 DIEXFQ68CQ4 756 aaKnown RBP17.04■□□□□ 0.32
TMEM136-201ENST00000314475 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
TMEM136-201ENST00000314475 KCNH5Q8NCM2 988 aa17.04■□□□□ 0.32
TMEM136-201ENST00000314475 PARD3Q8TEW0 1356 aa17.03■□□□□ 0.32
TMEM136-201ENST00000314475 RALBP1Q15311 655 aa17.03■□□□□ 0.32
TMEM136-201ENST00000314475 ANP32CO43423 234 aa17.02■□□□□ 0.31
TMEM136-201ENST00000314475 GCP02774 474 aa17.02■□□□□ 0.31
TMEM136-201ENST00000314475 HAP1P54257 671 aaPredicted RBP17.02■□□□□ 0.31
TMEM136-201ENST00000314475 NFAT5O94916 1531 aa17.01■□□□□ 0.31
TMEM136-201ENST00000314475 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
TMEM136-201ENST00000314475 NCBP3Q53F19 620 aaKnown RBP17.01■□□□□ 0.31
TMEM136-201ENST00000314475 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
TMEM136-201ENST00000314475 AATKQ6ZMQ8 1374 aa17.01■□□□□ 0.31
TMEM136-201ENST00000314475 SPATA31A6Q5VVP1 1343 aa17■□□□□ 0.31
TMEM136-201ENST00000314475 PRKRIP1Q9H875 184 aaPredicted RBP17■□□□□ 0.31
TMEM136-201ENST00000314475 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
TMEM136-201ENST00000314475 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
TMEM136-201ENST00000314475 SOX12O15370 315 aa16.98■□□□□ 0.31
TMEM136-201ENST00000314475 CNKSR2Q8WXI2 1034 aa16.98■□□□□ 0.31
TMEM136-201ENST00000314475 LTN1O94822 1766 aa16.97■□□□□ 0.31
TMEM136-201ENST00000314475 CPDO75976 1380 aa16.97■□□□□ 0.31
TMEM136-201ENST00000314475 MYBBP1AQ9BQG0 1328 aaKnown RBP16.95■□□□□ 0.3
TMEM136-201ENST00000314475 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
TMEM136-201ENST00000314475 NUTM2BA6NNL0 878 aaPredicted RBP16.95■□□□□ 0.3
TMEM136-201ENST00000314475 NUTM2EB1AL46 878 aaPredicted RBP16.95■□□□□ 0.3
TMEM136-201ENST00000314475 PPP2R1AP30153 589 aa16.95■□□□□ 0.3
TMEM136-201ENST00000314475 ZC3H6P61129 1189 aaKnown RBP16.95■□□□□ 0.3
TMEM136-201ENST00000314475 ARHGEF25Q86VW2 580 aa16.95■□□□□ 0.3
TMEM136-201ENST00000314475 NUTM2AQ8IVF1 878 aaPredicted RBP16.95■□□□□ 0.3
TMEM136-201ENST00000314475 MAP3K19Q56UN5 1328 aa16.94■□□□□ 0.3
TMEM136-201ENST00000314475 ABCC6O95255 1503 aa16.94■□□□□ 0.3
TMEM136-201ENST00000314475 KIF24Q5T7B8 1368 aa16.94■□□□□ 0.3
TMEM136-201ENST00000314475 KIAA0232Q92628 1395 aa16.94■□□□□ 0.3
TMEM136-201ENST00000314475 FBLN1P23142 703 aa16.94■□□□□ 0.3
TMEM136-201ENST00000314475 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
TMEM136-201ENST00000314475 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
TMEM136-201ENST00000314475 RTL1A6NKG5 1358 aa16.93■□□□□ 0.3
TMEM136-201ENST00000314475 PRDM11Q9NQV5 511 aa16.93■□□□□ 0.3
TMEM136-201ENST00000314475 AMPHP49418 695 aa16.92■□□□□ 0.3
TMEM136-201ENST00000314475 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
TMEM136-201ENST00000314475 LRP6O75581 1613 aa16.92■□□□□ 0.3
TMEM136-201ENST00000314475 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms