RNA–Protein interactions for RNA: ENST00000310483.10

SLC39A1-201, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-201ENST00000310483 GGT6Q6P531 493 aa19.84■□□□□ 0.77
SLC39A1-201ENST00000310483 ZBTB40Q9NUA8 1239 aa19.83■□□□□ 0.77
SLC39A1-201ENST00000310483 KIDINS220Q9ULH0 1771 aa19.83■□□□□ 0.77
SLC39A1-201ENST00000310483 NPATQ14207 1427 aa19.83■□□□□ 0.76
SLC39A1-201ENST00000310483 EVC2Q86UK5 1308 aa19.83■□□□□ 0.76
SLC39A1-201ENST00000310483 CT47B1P0C2W7 299 aaPredicted RBP19.81■□□□□ 0.76
SLC39A1-201ENST00000310483 DDIT3P35638 169 aa19.8■□□□□ 0.76
SLC39A1-201ENST00000310483 RIPK4P57078 832 aa19.8■□□□□ 0.76
SLC39A1-201ENST00000310483 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
SLC39A1-201ENST00000310483 GLI2P10070 1586 aa19.8■□□□□ 0.76
SLC39A1-201ENST00000310483 A0A1W2PP64 1363 aa19.8■□□□□ 0.76
SLC39A1-201ENST00000310483 NCBP3Q53F19 620 aaKnown RBP19.8■□□□□ 0.76
SLC39A1-201ENST00000310483 NAP1L5Q96NT1 182 aaPredicted RBP19.8■□□□□ 0.76
SLC39A1-201ENST00000310483 NUCB1Q02818 461 aa19.79■□□□□ 0.76
SLC39A1-201ENST00000310483 TNPO1Q92973 898 aaKnown RBP19.79■□□□□ 0.76
SLC39A1-201ENST00000310483 GRPEL1Q9HAV7 217 aa19.79■□□□□ 0.76
SLC39A1-201ENST00000310483 MRE11P49959 708 aa19.78■□□□□ 0.76
SLC39A1-201ENST00000310483 STK26Q9P289 416 aa19.78■□□□□ 0.76
SLC39A1-201ENST00000310483 NSD2O96028 1365 aa19.78■□□□□ 0.76
SLC39A1-201ENST00000310483 NCOA3Q9Y6Q9 1424 aa19.78■□□□□ 0.76
SLC39A1-201ENST00000310483 LMTK2Q8IWU2 1503 aa19.78■□□□□ 0.76
SLC39A1-201ENST00000310483 CD2BP2O95400 341 aaKnown RBP19.77■□□□□ 0.76
SLC39A1-201ENST00000310483 RBM25P49756 843 aaKnown RBP19.77■□□□□ 0.76
SLC39A1-201ENST00000310483 PNNQ9H307 717 aaKnown RBP19.77■□□□□ 0.76
SLC39A1-201ENST00000310483 COL3A1P02461 1466 aaPredicted RBP19.77■□□□□ 0.76
SLC39A1-201ENST00000310483 DDX11L8A8MPP1 907 aa19.77■□□□□ 0.76
SLC39A1-201ENST00000310483 C1orf115Q9H7X2 142 aa19.77■□□□□ 0.76
SLC39A1-201ENST00000310483 ARHGEF28Q8N1W1 1705 aaKnown RBP19.77■□□□□ 0.76
SLC39A1-201ENST00000310483 CLCN1P35523 988 aa19.76■□□□□ 0.75
SLC39A1-201ENST00000310483 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
SLC39A1-201ENST00000310483 CHD1LQ86WJ1 897 aa19.76■□□□□ 0.75
SLC39A1-201ENST00000310483 GAS2L3Q86XJ1 694 aa19.76■□□□□ 0.75
SLC39A1-201ENST00000310483 HSP90AB1P08238 724 aaKnown RBP19.75■□□□□ 0.75
SLC39A1-201ENST00000310483 KIF2CQ99661 725 aa19.75■□□□□ 0.75
SLC39A1-201ENST00000310483 ERBB4Q15303 1308 aa19.75■□□□□ 0.75
SLC39A1-201ENST00000310483 ABCC11Q96J66 1382 aa19.74■□□□□ 0.75
SLC39A1-201ENST00000310483 CAMSAP1Q5T5Y3 1602 aa19.74■□□□□ 0.75
SLC39A1-201ENST00000310483 RBM42Q9BTD8 480 aaKnown RBP19.74■□□□□ 0.75
SLC39A1-201ENST00000310483 FYB1O15117 783 aa19.73■□□□□ 0.75
SLC39A1-201ENST00000310483 FBLN1P23142 703 aa19.73■□□□□ 0.75
SLC39A1-201ENST00000310483 SNX21Q969T3 373 aa19.73■□□□□ 0.75
SLC39A1-201ENST00000310483 ANKRD45Q5TZF3 282 aa19.73■□□□□ 0.75
SLC39A1-201ENST00000310483 KIF16BQ96L93 1317 aa19.72■□□□□ 0.75
SLC39A1-201ENST00000310483 IPO8O15397 1037 aaKnown RBP19.71■□□□□ 0.75
SLC39A1-201ENST00000310483 IL16Q14005 1332 aa19.71■□□□□ 0.75
SLC39A1-201ENST00000310483 RPGRIP1LQ68CZ1 1315 aa19.71■□□□□ 0.75
SLC39A1-201ENST00000310483 THUMPD2Q9BTF0 503 aaKnown RBP19.71■□□□□ 0.75
SLC39A1-201ENST00000310483 MINK1Q8N4C8 1332 aaPredicted RBP19.7■□□□□ 0.74
SLC39A1-201ENST00000310483 PUS7Q96PZ0 661 aaKnown RBP19.7■□□□□ 0.74
SLC39A1-201ENST00000310483 PPIP5K1Q6PFW1 1433 aa19.7■□□□□ 0.74
SLC39A1-201ENST00000310483 DIAPH1O60610 1272 aaKnown RBP19.7■□□□□ 0.74
SLC39A1-201ENST00000310483 RAB3GAP1Q15042 981 aa19.7■□□□□ 0.74
SLC39A1-201ENST00000310483 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
SLC39A1-201ENST00000310483 BMP2KLQ5H9B9 411 aa19.68■□□□□ 0.74
SLC39A1-201ENST00000310483 SIGLEC1Q9BZZ2 1709 aa19.68■□□□□ 0.74
SLC39A1-201ENST00000310483 HSP90AA1P07900 732 aaKnown RBP19.68■□□□□ 0.74
SLC39A1-201ENST00000310483 TBC1D9Q6ZT07 1266 aa19.68■□□□□ 0.74
SLC39A1-201ENST00000310483 ASXL2Q76L83 1435 aa19.68■□□□□ 0.74
SLC39A1-201ENST00000310483 ESPNB1AK53 854 aa19.67■□□□□ 0.74
SLC39A1-201ENST00000310483 ELL2O00472 640 aaPredicted RBP19.67■□□□□ 0.74
SLC39A1-201ENST00000310483 ZBTB7BO15156 539 aaPredicted RBP19.67■□□□□ 0.74
SLC39A1-201ENST00000310483 VGFO15240 615 aaPredicted RBP19.67■□□□□ 0.74
SLC39A1-201ENST00000310483 CFAP74Q9C0B2 1584 aa19.67■□□□□ 0.74
SLC39A1-201ENST00000310483 TSPYL6Q8N831 410 aa19.67■□□□□ 0.74
SLC39A1-201ENST00000310483 NEXMIFQ5QGS0 1516 aa19.67■□□□□ 0.74
SLC39A1-201ENST00000310483 ALDH1L2Q3SY69 923 aa19.66■□□□□ 0.74
SLC39A1-201ENST00000310483 SSFA2P28290 1259 aa19.66■□□□□ 0.74
SLC39A1-201ENST00000310483 SIRT2Q8IXJ6 389 aa19.66■□□□□ 0.74
SLC39A1-201ENST00000310483 GBP4Q96PP9 640 aa19.66■□□□□ 0.74
SLC39A1-201ENST00000310483 PRKAR2BP31323 418 aa19.65■□□□□ 0.74
SLC39A1-201ENST00000310483 GAS2L2Q8NHY3 880 aa19.65■□□□□ 0.74
SLC39A1-201ENST00000310483 CD163L1Q9NR16 1453 aa19.65■□□□□ 0.74
SLC39A1-201ENST00000310483 CIZ1Q9ULV3 898 aaPredicted RBP19.65■□□□□ 0.74
SLC39A1-201ENST00000310483 ABCC3O15438 1527 aa19.64■□□□□ 0.74
SLC39A1-201ENST00000310483 HECW2Q9P2P5 1572 aa19.64■□□□□ 0.73
SLC39A1-201ENST00000310483 HMOX1P09601 288 aa19.64■□□□□ 0.73
SLC39A1-201ENST00000310483 PHACTR3Q96KR7 559 aa19.64■□□□□ 0.73
SLC39A1-201ENST00000310483 PRAM1Q96QH2 718 aa19.64■□□□□ 0.73
SLC39A1-201ENST00000310483 LRRC7Q96NW7 1537 aa19.64■□□□□ 0.73
SLC39A1-201ENST00000310483 K7ELQ4 463 aaPredicted RBP19.63■□□□□ 0.73
SLC39A1-201ENST00000310483 MED14O60244 1454 aa19.63■□□□□ 0.73
SLC39A1-201ENST00000310483 MRPL50Q8N5N7 158 aaKnown RBP19.63■□□□□ 0.73
SLC39A1-201ENST00000310483 AK9Q5TCS8 1911 aa19.63■□□□□ 0.73
SLC39A1-201ENST00000310483 TERF2IPQ9NYB0 399 aa19.62■□□□□ 0.73
SLC39A1-201ENST00000310483 VAMP4O75379 141 aa19.62■□□□□ 0.73
SLC39A1-201ENST00000310483 IDI1Q13907 227 aa19.62■□□□□ 0.73
SLC39A1-201ENST00000310483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.61■□□□□ 0.73
SLC39A1-201ENST00000310483 TRIM44Q96DX7 344 aaPredicted RBP19.61■□□□□ 0.73
SLC39A1-201ENST00000310483 GCC1Q96CN9 775 aa19.61■□□□□ 0.73
SLC39A1-201ENST00000310483 ATAD2Q6PL18 1390 aa19.6■□□□□ 0.73
SLC39A1-201ENST00000310483 PNPLA6Q8IY17 1366 aa19.6■□□□□ 0.73
SLC39A1-201ENST00000310483 ANKRD26Q9UPS8 1709 aa19.6■□□□□ 0.73
SLC39A1-201ENST00000310483 CABP1Q9NZU7 370 aa19.6■□□□□ 0.73
SLC39A1-201ENST00000310483 ISY1Q9ULR0 285 aaKnown RBP19.6■□□□□ 0.73
SLC39A1-201ENST00000310483 FCHSD2O94868 740 aa19.6■□□□□ 0.73
SLC39A1-201ENST00000310483 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
SLC39A1-201ENST00000310483 PIK3C2BO00750 1634 aa19.58■□□□□ 0.73
SLC39A1-201ENST00000310483 SKOR2Q2VWA4 1001 aaPredicted RBP19.58■□□□□ 0.72
SLC39A1-201ENST00000310483 POGZQ7Z3K3 1410 aa19.58■□□□□ 0.72
SLC39A1-201ENST00000310483 PTPRMP28827 1452 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms