RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 PUS7Q96PZ0 661 aaKnown RBP16.95■□□□□ 0.3
VANGL1-201ENST00000310260 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
VANGL1-201ENST00000310260 USP32Q8NFA0 1604 aa16.94■□□□□ 0.3
VANGL1-201ENST00000310260 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
VANGL1-201ENST00000310260 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.94■□□□□ 0.3
VANGL1-201ENST00000310260 KRT28Q7Z3Y7 464 aa16.93■□□□□ 0.3
VANGL1-201ENST00000310260 IQSEC2Q5JU85 1478 aa16.92■□□□□ 0.3
VANGL1-201ENST00000310260 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
VANGL1-201ENST00000310260 KTN1Q86UP2 1357 aaKnown RBP16.91■□□□□ 0.3
VANGL1-201ENST00000310260 NPHP3Q7Z494 1330 aa16.9■□□□□ 0.3
VANGL1-201ENST00000310260 CARD14Q9BXL6 1004 aa16.9■□□□□ 0.3
VANGL1-201ENST00000310260 A0A1W2PP64 1363 aa16.89■□□□□ 0.3
VANGL1-201ENST00000310260 ZNF692Q9BU19 519 aaPredicted RBP16.89■□□□□ 0.29
VANGL1-201ENST00000310260 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.29
VANGL1-201ENST00000310260 ZBED9Q6R2W3 1325 aa16.89■□□□□ 0.29
VANGL1-201ENST00000310260 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
VANGL1-201ENST00000310260 CCDC184Q52MB2 194 aa16.88■□□□□ 0.29
VANGL1-201ENST00000310260 HSPA1LP34931 641 aa16.87■□□□□ 0.29
VANGL1-201ENST00000310260 NINLQ9Y2I6 1382 aa16.86■□□□□ 0.29
VANGL1-201ENST00000310260 KNSTRNQ9Y448 316 aa16.86■□□□□ 0.29
VANGL1-201ENST00000310260 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
VANGL1-201ENST00000310260 ANKRD36BQ8N2N9 1353 aa16.86■□□□□ 0.29
VANGL1-201ENST00000310260 ABTB2Q8N961 1025 aa16.86■□□□□ 0.29
VANGL1-201ENST00000310260 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
VANGL1-201ENST00000310260 CD163L1Q9NR16 1453 aa16.85■□□□□ 0.29
VANGL1-201ENST00000310260 ITSN1Q15811 1721 aa16.85■□□□□ 0.29
VANGL1-201ENST00000310260 SOX12O15370 315 aa16.85■□□□□ 0.29
VANGL1-201ENST00000310260 NME9Q86XW9 330 aa16.85■□□□□ 0.29
VANGL1-201ENST00000310260 IPO9Q96P70 1041 aaKnown RBP16.85■□□□□ 0.29
VANGL1-201ENST00000310260 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
VANGL1-201ENST00000310260 CPSF1Q10570 1443 aaKnown RBP16.84■□□□□ 0.29
VANGL1-201ENST00000310260 NSD3Q9BZ95 1437 aa16.84■□□□□ 0.29
VANGL1-201ENST00000310260 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
VANGL1-201ENST00000310260 FBXO41Q8TF61 875 aa16.84■□□□□ 0.29
VANGL1-201ENST00000310260 TOPAZ1Q8N9V7 1692 aa16.83■□□□□ 0.29
VANGL1-201ENST00000310260 USP6P35125 1406 aa16.83■□□□□ 0.29
VANGL1-201ENST00000310260 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
VANGL1-201ENST00000310260 GGNBP2Q9H3C7 697 aa16.83■□□□□ 0.28
VANGL1-201ENST00000310260 ANP32AP39687 249 aaKnown RBP16.82■□□□□ 0.28
VANGL1-201ENST00000310260 NLRP6P59044 892 aa16.82■□□□□ 0.28
VANGL1-201ENST00000310260 MYOM1P52179 1685 aa16.82■□□□□ 0.28
VANGL1-201ENST00000310260 IL27Q8NEV9 243 aa16.82■□□□□ 0.28
VANGL1-201ENST00000310260 CABLES1Q8TDN4 633 aa16.82■□□□□ 0.28
VANGL1-201ENST00000310260 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
VANGL1-201ENST00000310260 SOS2Q07890 1332 aaPredicted RBP16.82■□□□□ 0.28
VANGL1-201ENST00000310260 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
VANGL1-201ENST00000310260 KIF1AQ12756 1690 aa16.8■□□□□ 0.28
VANGL1-201ENST00000310260 FYB1O15117 783 aa16.8■□□□□ 0.28
VANGL1-201ENST00000310260 CGNL1Q0VF96 1302 aa16.79■□□□□ 0.28
VANGL1-201ENST00000310260 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
VANGL1-201ENST00000310260 NUTM2BA6NNL0 878 aaPredicted RBP16.79■□□□□ 0.28
VANGL1-201ENST00000310260 NUTM2EB1AL46 878 aaPredicted RBP16.79■□□□□ 0.28
VANGL1-201ENST00000310260 PER1O15534 1290 aaPredicted RBP16.79■□□□□ 0.28
VANGL1-201ENST00000310260 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
VANGL1-201ENST00000310260 NUTM2AQ8IVF1 878 aaPredicted RBP16.79■□□□□ 0.28
VANGL1-201ENST00000310260 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
VANGL1-201ENST00000310260 PXDNQ92626 1479 aa16.79■□□□□ 0.28
VANGL1-201ENST00000310260 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
VANGL1-201ENST00000310260 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
VANGL1-201ENST00000310260 ZBTB7CA1YPR0 619 aa16.78■□□□□ 0.28
VANGL1-201ENST00000310260 FBLN1P23142 703 aa16.77■□□□□ 0.28
VANGL1-201ENST00000310260 FAM9BQ8IZU0 186 aa16.77■□□□□ 0.28
VANGL1-201ENST00000310260 PHLPP1O60346 1717 aa16.77■□□□□ 0.27
VANGL1-201ENST00000310260 COG3Q96JB2 828 aa16.76■□□□□ 0.27
VANGL1-201ENST00000310260 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
VANGL1-201ENST00000310260 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
VANGL1-201ENST00000310260 MRS2Q9HD23 443 aa16.76■□□□□ 0.27
VANGL1-201ENST00000310260 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
VANGL1-201ENST00000310260 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
VANGL1-201ENST00000310260 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
VANGL1-201ENST00000310260 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
VANGL1-201ENST00000310260 TNS3Q68CZ2 1445 aa16.75■□□□□ 0.27
VANGL1-201ENST00000310260 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
VANGL1-201ENST00000310260 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
VANGL1-201ENST00000310260 AKAP12Q02952 1782 aa16.74■□□□□ 0.27
VANGL1-201ENST00000310260 NHSL1Q5SYE7 1610 aa16.74■□□□□ 0.27
VANGL1-201ENST00000310260 AHDC1Q5TGY3 1603 aaPredicted RBP16.74■□□□□ 0.27
VANGL1-201ENST00000310260 ZC3H6P61129 1189 aaKnown RBP16.73■□□□□ 0.27
VANGL1-201ENST00000310260 CCDC136Q96JN2 1154 aa16.73■□□□□ 0.27
VANGL1-201ENST00000310260 ADAMTS2O95450 1211 aa16.72■□□□□ 0.27
VANGL1-201ENST00000310260 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
VANGL1-201ENST00000310260 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
VANGL1-201ENST00000310260 MON2Q7Z3U7 1717 aa16.71■□□□□ 0.27
VANGL1-201ENST00000310260 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
VANGL1-201ENST00000310260 BRD4O60885 1362 aaPredicted RBP16.7■□□□□ 0.26
VANGL1-201ENST00000310260 PNPLA6Q8IY17 1366 aa16.7■□□□□ 0.26
VANGL1-201ENST00000310260 GCP02774 474 aa16.7■□□□□ 0.26
VANGL1-201ENST00000310260 COL16A1Q07092 1604 aaPredicted RBP16.7■□□□□ 0.26
VANGL1-201ENST00000310260 RTN4Q9NQC3 1192 aaKnown RBP16.7■□□□□ 0.26
VANGL1-201ENST00000310260 JCADQ9P266 1359 aa16.69■□□□□ 0.26
VANGL1-201ENST00000310260 RRS1Q15050 365 aaKnown RBP16.69■□□□□ 0.26
VANGL1-201ENST00000310260 TRPM3Q9HCF6 1732 aaPredicted RBP16.69■□□□□ 0.26
VANGL1-201ENST00000310260 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
VANGL1-201ENST00000310260 PIK3C2AO00443 1686 aa16.67■□□□□ 0.26
VANGL1-201ENST00000310260 NRKQ7Z2Y5 1582 aa16.67■□□□□ 0.26
VANGL1-201ENST00000310260 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
VANGL1-201ENST00000310260 MEX3CQ5U5Q3 659 aaKnown RBP16.66■□□□□ 0.26
VANGL1-201ENST00000310260 KCNH5Q8NCM2 988 aa16.65■□□□□ 0.26
VANGL1-201ENST00000310260 USP31Q70CQ4 1352 aa16.65■□□□□ 0.26
VANGL1-201ENST00000310260 PRDM11Q9NQV5 511 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms