RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 DUSP27Q5VZP5 1158 aa28■■■□□ 2.07
ATG4D-201ENST00000309469 MON2Q7Z3U7 1717 aa28■■■□□ 2.07
ATG4D-201ENST00000309469 KCNA6P17658 529 aa28■■■□□ 2.07
ATG4D-201ENST00000309469 RRP1P56182 461 aaKnown RBP28■■■□□ 2.07
ATG4D-201ENST00000309469 NUTM2FA1L443 756 aa27.99■■■□□ 2.07
ATG4D-201ENST00000309469 PNPLA6Q8IY17 1366 aa27.99■■■□□ 2.07
ATG4D-201ENST00000309469 AKAP12Q02952 1782 aa27.98■■■□□ 2.07
ATG4D-201ENST00000309469 TOPAZ1Q8N9V7 1692 aa27.98■■■□□ 2.07
ATG4D-201ENST00000309469 SETD1BQ9UPS6 1966 aaKnown RBP27.98■■■□□ 2.07
ATG4D-201ENST00000309469 TRMT2AQ8IZ69 625 aaKnown RBP27.97■■■□□ 2.07
ATG4D-201ENST00000309469 ITSN1Q15811 1721 aa27.97■■■□□ 2.07
ATG4D-201ENST00000309469 ACEP12821 1306 aa27.97■■■□□ 2.07
ATG4D-201ENST00000309469 TCP11L2Q8N4U5 519 aa27.96■■■□□ 2.07
ATG4D-201ENST00000309469 POLKQ9UBT6 870 aa27.96■■■□□ 2.07
ATG4D-201ENST00000309469 IQSEC2Q5JU85 1478 aa27.95■■■□□ 2.07
ATG4D-201ENST00000309469 ZRANB1Q9UGI0 708 aa27.95■■■□□ 2.06
ATG4D-201ENST00000309469 DIAPH1O60610 1272 aaKnown RBP27.94■■■□□ 2.06
ATG4D-201ENST00000309469 COG3Q96JB2 828 aa27.94■■■□□ 2.06
ATG4D-201ENST00000309469 U2SURPO15042 1029 aaKnown RBP27.94■■■□□ 2.06
ATG4D-201ENST00000309469 WWC1Q8IX03 1113 aa27.94■■■□□ 2.06
ATG4D-201ENST00000309469 FBLN1P23142 703 aa27.93■■■□□ 2.06
ATG4D-201ENST00000309469 E9PSI1 815 aa27.92■■■□□ 2.06
ATG4D-201ENST00000309469 NKTRP30414 1462 aaKnown RBP27.92■■■□□ 2.06
ATG4D-201ENST00000309469 SPINK5Q9NQ38 1064 aaPredicted RBP27.92■■■□□ 2.06
ATG4D-201ENST00000309469 TTC21BQ7Z4L5 1316 aa27.92■■■□□ 2.06
ATG4D-201ENST00000309469 AATKQ6ZMQ8 1374 aa27.91■■■□□ 2.06
ATG4D-201ENST00000309469 NCBP3Q53F19 620 aaKnown RBP27.91■■■□□ 2.06
ATG4D-201ENST00000309469 RRP7AQ9Y3A4 280 aaKnown RBP27.9■■■□□ 2.06
ATG4D-201ENST00000309469 PHF23Q9BUL5 403 aaPredicted RBP27.9■■■□□ 2.06
ATG4D-201ENST00000309469 USP6P35125 1406 aa27.89■■■□□ 2.06
ATG4D-201ENST00000309469 NEUROD2Q15784 382 aa27.89■■■□□ 2.06
ATG4D-201ENST00000309469 DMRT2Q9Y5R5 561 aa27.89■■■□□ 2.06
ATG4D-201ENST00000309469 PPM1GO15355 546 aaPredicted RBP27.88■■■□□ 2.05
ATG4D-201ENST00000309469 CCDC27Q2M243 656 aa27.88■■■□□ 2.05
ATG4D-201ENST00000309469 PLEKHF1Q96S99 279 aa27.88■■■□□ 2.05
ATG4D-201ENST00000309469 NRKQ7Z2Y5 1582 aa27.87■■■□□ 2.05
ATG4D-201ENST00000309469 NPHP4O75161 1426 aaPredicted RBP27.86■■■□□ 2.05
ATG4D-201ENST00000309469 B4GALNT3Q6L9W6 998 aa27.86■■■□□ 2.05
ATG4D-201ENST00000309469 PMFBP1Q8TBY8 1022 aa27.86■■■□□ 2.05
ATG4D-201ENST00000309469 EMILIN1Q9Y6C2 1016 aa27.86■■■□□ 2.05
ATG4D-201ENST00000309469 ANKARQ7Z5J8 1434 aa27.85■■■□□ 2.05
ATG4D-201ENST00000309469 CHD2O14647 1828 aaKnown RBP27.85■■■□□ 2.05
ATG4D-201ENST00000309469 WDR63Q8IWG1 891 aa27.84■■■□□ 2.05
ATG4D-201ENST00000309469 SSH2Q76I76 1423 aa27.84■■■□□ 2.05
ATG4D-201ENST00000309469 PNNQ9H307 717 aaKnown RBP27.84■■■□□ 2.05
ATG4D-201ENST00000309469 CDK12Q9NYV4 1490 aaPredicted RBP27.82■■■□□ 2.04
ATG4D-201ENST00000309469 NGDNQ8NEJ9 315 aaKnown RBP27.82■■■□□ 2.04
ATG4D-201ENST00000309469 MAP2P11137 1827 aaKnown RBP27.81■■■□□ 2.04
ATG4D-201ENST00000309469 TTC21AQ8NDW8 1320 aa27.8■■■□□ 2.04
ATG4D-201ENST00000309469 MAPK8IP3Q9UPT6 1336 aa27.8■■■□□ 2.04
ATG4D-201ENST00000309469 OVOS2A0A0J9YW53 1432 aa27.8■■■□□ 2.04
ATG4D-201ENST00000309469 OVOS2Q6IE36 1432 aa27.8■■■□□ 2.04
ATG4D-201ENST00000309469 FCHSD2O94868 740 aa27.8■■■□□ 2.04
ATG4D-201ENST00000309469 PLIN1O60240 522 aa27.79■■■□□ 2.04
ATG4D-201ENST00000309469 RRS1Q15050 365 aaKnown RBP27.79■■■□□ 2.04
ATG4D-201ENST00000309469 TSHZ2Q9NRE2 1034 aa27.79■■■□□ 2.04
ATG4D-201ENST00000309469 IL13P35225 146 aa27.78■■■□□ 2.04
ATG4D-201ENST00000309469 TMPOP42166 694 aaKnown RBP27.78■■■□□ 2.04
ATG4D-201ENST00000309469 FMN2Q9NZ56 1722 aa27.78■■■□□ 2.04
ATG4D-201ENST00000309469 EXOC6Q8TAG9 804 aa27.77■■■□□ 2.04
ATG4D-201ENST00000309469 RGPD8O14715 1765 aaPredicted RBP27.76■■■□□ 2.03
ATG4D-201ENST00000309469 CCDC136Q96JN2 1154 aa27.75■■■□□ 2.03
ATG4D-201ENST00000309469 RSPH6AQ9H0K4 717 aa27.75■■■□□ 2.03
ATG4D-201ENST00000309469 USP31Q70CQ4 1352 aa27.74■■■□□ 2.03
ATG4D-201ENST00000309469 NALCNQ8IZF0 1738 aa27.73■■■□□ 2.03
ATG4D-201ENST00000309469 RBM33Q96EV2 1170 aaKnown RBP27.73■■■□□ 2.03
ATG4D-201ENST00000309469 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.71■■■□□ 2.03
ATG4D-201ENST00000309469 TRIM35Q9UPQ4 493 aa27.71■■■□□ 2.03
ATG4D-201ENST00000309469 ADGRL3Q9HAR2 1447 aa27.71■■■□□ 2.03
ATG4D-201ENST00000309469 PRKAR2BP31323 418 aa27.71■■■□□ 2.03
ATG4D-201ENST00000309469 LRRC7Q96NW7 1537 aa27.7■■■□□ 2.03
ATG4D-201ENST00000309469 MYH16Q9H6N6 1097 aa27.69■■■□□ 2.02
ATG4D-201ENST00000309469 NEFMP07197 916 aa27.69■■■□□ 2.02
ATG4D-201ENST00000309469 HMOX1P09601 288 aa27.69■■■□□ 2.02
ATG4D-201ENST00000309469 RIPK4P57078 832 aa27.69■■■□□ 2.02
ATG4D-201ENST00000309469 CRBNQ96SW2 442 aa27.67■■■□□ 2.02
ATG4D-201ENST00000309469 PHF8Q9UPP1 1060 aa27.67■■■□□ 2.02
ATG4D-201ENST00000309469 C20orf194Q5TEA3 1177 aa27.66■■■□□ 2.02
ATG4D-201ENST00000309469 NWD1Q149M9 1564 aa27.65■■■□□ 2.02
ATG4D-201ENST00000309469 BCAR3O75815 825 aa27.65■■■□□ 2.02
ATG4D-201ENST00000309469 IL16Q14005 1332 aa27.64■■■□□ 2.01
ATG4D-201ENST00000309469 C14orf37Q86TY3 774 aa27.63■■■□□ 2.01
ATG4D-201ENST00000309469 PHACTR3Q96KR7 559 aa27.63■■■□□ 2.01
ATG4D-201ENST00000309469 EIF4A2Q14240 407 aaKnown RBP27.63■■■□□ 2.01
ATG4D-201ENST00000309469 PIK3C2AO00443 1686 aa27.62■■■□□ 2.01
ATG4D-201ENST00000309469 SOX12O15370 315 aa27.61■■■□□ 2.01
ATG4D-201ENST00000309469 NLRP6P59044 892 aa27.61■■■□□ 2.01
ATG4D-201ENST00000309469 NFE2L2Q16236 605 aa27.61■■■□□ 2.01
ATG4D-201ENST00000309469 MAP3K19Q56UN5 1328 aa27.6■■■□□ 2.01
ATG4D-201ENST00000309469 HSP90AB2PQ58FF8 381 aa27.59■■■□□ 2.01
ATG4D-201ENST00000309469 PROSER2Q86WR7 435 aaPredicted RBP27.59■■■□□ 2.01
ATG4D-201ENST00000309469 ESCO1Q5FWF5 840 aa27.59■■■□□ 2.01
ATG4D-201ENST00000309469 PEAK1Q9H792 1746 aa27.59■■■□□ 2.01
ATG4D-201ENST00000309469 FANCIQ9NVI1 1328 aa27.58■■■□□ 2.01
ATG4D-201ENST00000309469 RARSP54136 660 aaKnown RBP27.57■■■□□ 2
ATG4D-201ENST00000309469 ABTB2Q8N961 1025 aa27.57■■■□□ 2
ATG4D-201ENST00000309469 PAK3O75914 559 aaPredicted RBP27.57■■■□□ 2
ATG4D-201ENST00000309469 SBNO1A3KN83 1393 aa27.56■■■□□ 2
ATG4D-201ENST00000309469 TSR2Q969E8 191 aaKnown RBP27.55■■■□□ 2
ATG4D-201ENST00000309469 CT47B1P0C2W7 299 aaPredicted RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms