RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
TSR1-201ENST00000301364 FAM13BQ9NYF5 915 aa23.33■■□□□ 1.33
TSR1-201ENST00000301364 KIF14Q15058 1648 aa23.32■■□□□ 1.32
TSR1-201ENST00000301364 RARSP54136 660 aaKnown RBP23.32■■□□□ 1.32
TSR1-201ENST00000301364 GOLGA6L1Q8N7Z2 621 aa23.32■■□□□ 1.32
TSR1-201ENST00000301364 SLC4A2P04920 1241 aa23.32■■□□□ 1.32
TSR1-201ENST00000301364 TRIM29Q14134 588 aa23.32■■□□□ 1.32
TSR1-201ENST00000301364 VSIG10Q8N0Z9 540 aa23.32■■□□□ 1.32
TSR1-201ENST00000301364 SULT6B1Q6IMI4 303 aa23.31■■□□□ 1.32
TSR1-201ENST00000301364 PRPF40AO75400 957 aaKnown RBP23.31■■□□□ 1.32
TSR1-201ENST00000301364 TRDNQ13061 729 aa23.31■■□□□ 1.32
TSR1-201ENST00000301364 DUSP27Q5VZP5 1158 aa23.3■■□□□ 1.32
TSR1-201ENST00000301364 PTPRKQ15262 1439 aa23.3■■□□□ 1.32
TSR1-201ENST00000301364 CCDC73Q6ZRK6 1079 aa23.3■■□□□ 1.32
TSR1-201ENST00000301364 RIC3Q7Z5B4 369 aa23.3■■□□□ 1.32
TSR1-201ENST00000301364 RAPGEF4Q8WZA2 1011 aa23.3■■□□□ 1.32
TSR1-201ENST00000301364 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
TSR1-201ENST00000301364 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
TSR1-201ENST00000301364 CREBRFQ8IUR6 639 aa23.29■■□□□ 1.32
TSR1-201ENST00000301364 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
TSR1-201ENST00000301364 TPD52L1Q16890 204 aaPredicted RBP23.29■■□□□ 1.32
TSR1-201ENST00000301364 PDCP20941 246 aa23.28■■□□□ 1.32
TSR1-201ENST00000301364 RPAP2Q8IXW5 612 aaPredicted RBP23.28■■□□□ 1.32
TSR1-201ENST00000301364 HIP1O00291 1037 aa23.28■■□□□ 1.32
TSR1-201ENST00000301364 TPM1P09493 284 aa23.28■■□□□ 1.32
TSR1-201ENST00000301364 GTF2E1P29083 439 aaPredicted RBP23.28■■□□□ 1.32
TSR1-201ENST00000301364 NFE2L2Q16236 605 aa23.28■■□□□ 1.32
TSR1-201ENST00000301364 RTEL1-TNFRSF6BF6WH68 1400 aa23.28■■□□□ 1.32
TSR1-201ENST00000301364 RNF214Q8ND24 703 aa23.28■■□□□ 1.32
TSR1-201ENST00000301364 TMEM57Q8N5G2 664 aa23.27■■□□□ 1.32
TSR1-201ENST00000301364 LRRCC1Q9C099 1032 aa23.27■■□□□ 1.31
TSR1-201ENST00000301364 TXNDC2Q86VQ3 553 aa23.26■■□□□ 1.31
TSR1-201ENST00000301364 ZNF592Q92610 1267 aa23.26■■□□□ 1.31
TSR1-201ENST00000301364 GRPEL1Q9HAV7 217 aa23.26■■□□□ 1.31
TSR1-201ENST00000301364 HOOK1Q9UJC3 728 aaKnown RBP23.26■■□□□ 1.31
TSR1-201ENST00000301364 ERC1Q8IUD2 1116 aa23.26■■□□□ 1.31
TSR1-201ENST00000301364 TSR1Q2NL82 804 aaKnown RBP23.26■■□□□ 1.31
TSR1-201ENST00000301364 MAP7D2Q96T17 732 aa23.26■■□□□ 1.31
TSR1-201ENST00000301364 MTERF4Q7Z6M4 381 aaKnown RBP23.25■■□□□ 1.31
TSR1-201ENST00000301364 TSPY26PQ9H489 355 aa23.25■■□□□ 1.31
TSR1-201ENST00000301364 UGGT2Q9NYU1 1516 aa23.25■■□□□ 1.31
TSR1-201ENST00000301364 ALDH1L2Q3SY69 923 aa23.25■■□□□ 1.31
TSR1-201ENST00000301364 SRCIN1Q9C0H9 1055 aa23.25■■□□□ 1.31
TSR1-201ENST00000301364 FSD1Q9BTV5 496 aa23.24■■□□□ 1.31
TSR1-201ENST00000301364 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
TSR1-201ENST00000301364 TPM2P07951 284 aa23.24■■□□□ 1.31
TSR1-201ENST00000301364 R3HCC1Q9Y3T6 440 aaKnown RBP23.24■■□□□ 1.31
TSR1-201ENST00000301364 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
TSR1-201ENST00000301364 APPP05067 770 aa23.23■■□□□ 1.31
TSR1-201ENST00000301364 GPRASP1Q5JY77 1395 aa23.23■■□□□ 1.31
TSR1-201ENST00000301364 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
TSR1-201ENST00000301364 HDGFL1Q5TGJ6 251 aa23.23■■□□□ 1.31
TSR1-201ENST00000301364 PLEKHO1Q53GL0 409 aaPredicted RBP23.22■■□□□ 1.31
TSR1-201ENST00000301364 ABTB2Q8N961 1025 aa23.22■■□□□ 1.31
TSR1-201ENST00000301364 NUTM2GQ5VZR2 741 aa23.22■■□□□ 1.31
TSR1-201ENST00000301364 TNNT3P45378 269 aaPredicted RBP23.21■■□□□ 1.31
TSR1-201ENST00000301364 EVA1CP58658 441 aa23.21■■□□□ 1.31
TSR1-201ENST00000301364 SSH1Q8WYL5 1049 aa23.21■■□□□ 1.31
TSR1-201ENST00000301364 TMX4Q9H1E5 349 aaPredicted RBP23.21■■□□□ 1.31
TSR1-201ENST00000301364 IFT57Q9NWB7 429 aa23.21■■□□□ 1.31
TSR1-201ENST00000301364 WDR33Q9C0J8 1336 aaKnown RBP23.21■■□□□ 1.31
TSR1-201ENST00000301364 RALYLQ86SE5 291 aaKnown RBP23.2■■□□□ 1.3
TSR1-201ENST00000301364 NEUROD6Q96NK8 337 aa23.2■■□□□ 1.3
TSR1-201ENST00000301364 RALGAPBQ86X10 1494 aa23.2■■□□□ 1.3
TSR1-201ENST00000301364 NOC3LQ8WTT2 800 aaKnown RBP23.2■■□□□ 1.3
TSR1-201ENST00000301364 NAT10Q9H0A0 1025 aaKnown RBP23.19■■□□□ 1.3
TSR1-201ENST00000301364 GPATCH8Q9UKJ3 1502 aaKnown RBP23.19■■□□□ 1.3
TSR1-201ENST00000301364 PES1O00541 588 aaKnown RBP23.18■■□□□ 1.3
TSR1-201ENST00000301364 GPS2Q13227 327 aa23.18■■□□□ 1.3
TSR1-201ENST00000301364 HOMER1Q86YM7 354 aa23.18■■□□□ 1.3
TSR1-201ENST00000301364 DISP3Q9P2K9 1392 aa23.18■■□□□ 1.3
TSR1-201ENST00000301364 SKAP1Q86WV1 359 aa23.18■■□□□ 1.3
TSR1-201ENST00000301364 ANKRD20A12PQ8NF67 263 aa23.17■■□□□ 1.3
TSR1-201ENST00000301364 NLRP2Q9NX02 1062 aa23.17■■□□□ 1.3
TSR1-201ENST00000301364 CLSTN1O94985 981 aa23.17■■□□□ 1.3
TSR1-201ENST00000301364 CCDC27Q2M243 656 aa23.17■■□□□ 1.3
TSR1-201ENST00000301364 CCAR2Q8N163 923 aaKnown RBP23.16■■□□□ 1.3
TSR1-201ENST00000301364 CCDC61Q9Y6R9 512 aa23.16■■□□□ 1.3
TSR1-201ENST00000301364 SAFBQ15424 915 aaKnown RBP eCLIP23.16■■□□□ 1.3
TSR1-201ENST00000301364 AEBP1Q8IUX7 1158 aa23.16■■□□□ 1.3
TSR1-201ENST00000301364 NFXL1Q6ZNB6 911 aa23.16■■□□□ 1.3
TSR1-201ENST00000301364 HMGN5P82970 282 aaKnown RBP23.15■■□□□ 1.3
TSR1-201ENST00000301364 CYP46A1Q9Y6A2 500 aa23.15■■□□□ 1.3
TSR1-201ENST00000301364 SDF4Q9BRK5 362 aa23.15■■□□□ 1.3
TSR1-201ENST00000301364 ADGRF5Q8IZF2 1346 aa23.15■■□□□ 1.3
TSR1-201ENST00000301364 NSD2O96028 1365 aa23.15■■□□□ 1.3
TSR1-201ENST00000301364 FIBPO43427 364 aa23.15■■□□□ 1.3
TSR1-201ENST00000301364 MARCH6O60337 910 aa23.15■■□□□ 1.3
TSR1-201ENST00000301364 RAPGEF3O95398 923 aa23.15■■□□□ 1.3
TSR1-201ENST00000301364 ERICH2A1L162 156 aa23.13■■□□□ 1.29
TSR1-201ENST00000301364 A0A0U1RQG5 324 aaPredicted RBP23.13■■□□□ 1.29
TSR1-201ENST00000301364 ANKRD1Q15327 319 aa23.13■■□□□ 1.29
TSR1-201ENST00000301364 WASHC4Q2M389 1173 aa23.13■■□□□ 1.29
TSR1-201ENST00000301364 RRS1Q15050 365 aaKnown RBP23.13■■□□□ 1.29
TSR1-201ENST00000301364 FAM135AQ9P2D6 1515 aa23.13■■□□□ 1.29
TSR1-201ENST00000301364 ESPNB1AK53 854 aa23.12■■□□□ 1.29
TSR1-201ENST00000301364 TRIM5Q9C035 493 aa23.12■■□□□ 1.29
TSR1-201ENST00000301364 TCOF1Q13428 1488 aaKnown RBP23.12■■□□□ 1.29
TSR1-201ENST00000301364 IPO7O95373 1038 aaKnown RBP23.12■■□□□ 1.29
TSR1-201ENST00000301364 TBC1D2Q9BYX2 928 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms