RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ATAD2Q6PL18 1390 aa16.53■□□□□ 0.24
HIF3A-204ENST00000300862 MAPK8IP3Q9UPT6 1336 aa16.53■□□□□ 0.24
HIF3A-204ENST00000300862 PREX1Q8TCU6 1659 aa16.53■□□□□ 0.24
HIF3A-204ENST00000300862 CD163L1Q9NR16 1453 aa16.52■□□□□ 0.24
HIF3A-204ENST00000300862 SMC4Q9NTJ3 1288 aa16.52■□□□□ 0.23
HIF3A-204ENST00000300862 HDGFL2Q7Z4V5 671 aaPredicted RBP16.51■□□□□ 0.23
HIF3A-204ENST00000300862 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
HIF3A-204ENST00000300862 RIPK4P57078 832 aa16.51■□□□□ 0.23
HIF3A-204ENST00000300862 PMFBP1Q8TBY8 1022 aa16.51■□□□□ 0.23
HIF3A-204ENST00000300862 PDZRN3Q9UPQ7 1066 aa16.51■□□□□ 0.23
HIF3A-204ENST00000300862 USP19O94966 1318 aa16.5■□□□□ 0.23
HIF3A-204ENST00000300862 ZKSCAN2Q63HK3 967 aa16.5■□□□□ 0.23
HIF3A-204ENST00000300862 DIAPH1O60610 1272 aaKnown RBP16.5■□□□□ 0.23
HIF3A-204ENST00000300862 MVPQ14764 893 aaKnown RBP16.5■□□□□ 0.23
HIF3A-204ENST00000300862 SSH1Q8WYL5 1049 aa16.5■□□□□ 0.23
HIF3A-204ENST00000300862 NFKBIBQ15653 356 aa16.49■□□□□ 0.23
HIF3A-204ENST00000300862 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
HIF3A-204ENST00000300862 COL3A1P02461 1466 aaPredicted RBP16.49■□□□□ 0.23
HIF3A-204ENST00000300862 NLRP1Q9C000 1473 aa16.48■□□□□ 0.23
HIF3A-204ENST00000300862 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
HIF3A-204ENST00000300862 ADGRB2O60241 1585 aa16.48■□□□□ 0.23
HIF3A-204ENST00000300862 TRIM27P14373 513 aa16.47■□□□□ 0.23
HIF3A-204ENST00000300862 RWDD1Q9H446 243 aaPredicted RBP16.46■□□□□ 0.23
HIF3A-204ENST00000300862 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
HIF3A-204ENST00000300862 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
HIF3A-204ENST00000300862 NOB1Q9ULX3 412 aaKnown RBP16.46■□□□□ 0.23
HIF3A-204ENST00000300862 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
HIF3A-204ENST00000300862 HMOX1P09601 288 aa16.45■□□□□ 0.22
HIF3A-204ENST00000300862 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
HIF3A-204ENST00000300862 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
HIF3A-204ENST00000300862 POLKQ9UBT6 870 aa16.44■□□□□ 0.22
HIF3A-204ENST00000300862 ZRANB1Q9UGI0 708 aa16.44■□□□□ 0.22
HIF3A-204ENST00000300862 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
HIF3A-204ENST00000300862 GSE1Q14687 1217 aa16.44■□□□□ 0.22
HIF3A-204ENST00000300862 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
HIF3A-204ENST00000300862 NCKAP5LQ9HCH0 1330 aa16.44■□□□□ 0.22
HIF3A-204ENST00000300862 AAMPQ13685 434 aa16.43■□□□□ 0.22
HIF3A-204ENST00000300862 ATF7IPQ6VMQ6 1270 aa16.42■□□□□ 0.22
HIF3A-204ENST00000300862 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
HIF3A-204ENST00000300862 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
HIF3A-204ENST00000300862 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
HIF3A-204ENST00000300862 TXNDC2Q86VQ3 553 aa16.41■□□□□ 0.22
HIF3A-204ENST00000300862 PNPLA6Q8IY17 1366 aa16.41■□□□□ 0.22
HIF3A-204ENST00000300862 TMEM57Q8N5G2 664 aa16.41■□□□□ 0.22
HIF3A-204ENST00000300862 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.41■□□□□ 0.22
HIF3A-204ENST00000300862 VIRMAQ69YN4 1812 aaKnown RBP16.41■□□□□ 0.22
HIF3A-204ENST00000300862 CT47B1P0C2W7 299 aaPredicted RBP16.41■□□□□ 0.22
HIF3A-204ENST00000300862 NME9Q86XW9 330 aa16.41■□□□□ 0.22
HIF3A-204ENST00000300862 A2ML1A8K2U0 1454 aa16.41■□□□□ 0.22
HIF3A-204ENST00000300862 RIMS2Q9UQ26 1411 aa16.41■□□□□ 0.22
HIF3A-204ENST00000300862 RSPH6AQ9H0K4 717 aa16.4■□□□□ 0.22
HIF3A-204ENST00000300862 MED14O60244 1454 aa16.4■□□□□ 0.22
HIF3A-204ENST00000300862 CLTCQ00610 1675 aaKnown RBP16.4■□□□□ 0.22
HIF3A-204ENST00000300862 FCHSD2O94868 740 aa16.39■□□□□ 0.22
HIF3A-204ENST00000300862 IL16Q14005 1332 aa16.39■□□□□ 0.21
HIF3A-204ENST00000300862 ELL2O00472 640 aaPredicted RBP16.38■□□□□ 0.21
HIF3A-204ENST00000300862 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
HIF3A-204ENST00000300862 ANKRD26Q9UPS8 1709 aa16.38■□□□□ 0.21
HIF3A-204ENST00000300862 METP08581 1390 aa16.38■□□□□ 0.21
HIF3A-204ENST00000300862 SLKQ9H2G2 1235 aaPredicted RBP16.37■□□□□ 0.21
HIF3A-204ENST00000300862 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
HIF3A-204ENST00000300862 WASLO00401 505 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-204ENST00000300862 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
HIF3A-204ENST00000300862 LRRC7Q96NW7 1537 aa16.36■□□□□ 0.21
HIF3A-204ENST00000300862 TSPYL6Q8N831 410 aa16.35■□□□□ 0.21
HIF3A-204ENST00000300862 UPF2Q9HAU5 1272 aaKnown RBP16.35■□□□□ 0.21
HIF3A-204ENST00000300862 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
HIF3A-204ENST00000300862 ZBTB40Q9NUA8 1239 aa16.35■□□□□ 0.21
HIF3A-204ENST00000300862 PPIP5K1Q6PFW1 1433 aa16.34■□□□□ 0.21
HIF3A-204ENST00000300862 KIF20BQ96Q89 1820 aa16.34■□□□□ 0.21
HIF3A-204ENST00000300862 HDAC1Q13547 482 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-204ENST00000300862 NUDT16Q96DE0 195 aaKnown RBP16.34■□□□□ 0.21
HIF3A-204ENST00000300862 DIP2BQ9P265 1576 aa16.34■□□□□ 0.21
HIF3A-204ENST00000300862 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.21
HIF3A-204ENST00000300862 NFE2L2Q16236 605 aa16.33■□□□□ 0.21
HIF3A-204ENST00000300862 FAM135BQ49AJ0 1406 aa16.33■□□□□ 0.21
HIF3A-204ENST00000300862 KIF16BQ96L93 1317 aa16.33■□□□□ 0.21
HIF3A-204ENST00000300862 IL13P35225 146 aa16.33■□□□□ 0.2
HIF3A-204ENST00000300862 BECN1Q14457 450 aa16.33■□□□□ 0.2
HIF3A-204ENST00000300862 NUTM2FA1L443 756 aa16.33■□□□□ 0.2
HIF3A-204ENST00000300862 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
HIF3A-204ENST00000300862 SPRYD3Q8NCJ5 442 aa16.33■□□□□ 0.2
HIF3A-204ENST00000300862 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
HIF3A-204ENST00000300862 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
HIF3A-204ENST00000300862 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
HIF3A-204ENST00000300862 ATP7BP35670 1465 aa16.32■□□□□ 0.2
HIF3A-204ENST00000300862 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
HIF3A-204ENST00000300862 C1orf115Q9H7X2 142 aa16.32■□□□□ 0.2
HIF3A-204ENST00000300862 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
HIF3A-204ENST00000300862 UBE2Q2Q8WVN8 375 aa16.31■□□□□ 0.2
HIF3A-204ENST00000300862 VAMP4O75379 141 aa16.31■□□□□ 0.2
HIF3A-204ENST00000300862 SMC5Q8IY18 1101 aa16.31■□□□□ 0.2
HIF3A-204ENST00000300862 TBC1D2Q9BYX2 928 aa16.31■□□□□ 0.2
HIF3A-204ENST00000300862 LNPKQ9C0E8 428 aa16.31■□□□□ 0.2
HIF3A-204ENST00000300862 DLC1Q96QB1 1528 aa16.3■□□□□ 0.2
HIF3A-204ENST00000300862 SPATA31D1Q6ZQQ2 1576 aa16.3■□□□□ 0.2
HIF3A-204ENST00000300862 ALDH1L2Q3SY69 923 aa16.3■□□□□ 0.2
HIF3A-204ENST00000300862 COG3Q96JB2 828 aa16.3■□□□□ 0.2
HIF3A-204ENST00000300862 MBIPQ9NS73 344 aa16.3■□□□□ 0.2
HIF3A-204ENST00000300862 CPSF1Q10570 1443 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms