RNA–Protein interactions for RNA: ENST00000299961.5

HTR3A-201, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 1,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-201ENST00000299961 SIRT1Q96EB6 747 aa17.77■□□□□ 0.43
HTR3A-201ENST00000299961 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
HTR3A-201ENST00000299961 PNPLA6Q8IY17 1366 aa17.76■□□□□ 0.43
HTR3A-201ENST00000299961 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
HTR3A-201ENST00000299961 CPS1P31327 1500 aa17.75■□□□□ 0.43
HTR3A-201ENST00000299961 TECPR2O15040 1411 aa17.75■□□□□ 0.43
HTR3A-201ENST00000299961 CT47B1P0C2W7 299 aaPredicted RBP17.75■□□□□ 0.43
HTR3A-201ENST00000299961 RARSP54136 660 aaKnown RBP17.75■□□□□ 0.43
HTR3A-201ENST00000299961 WAPLQ7Z5K2 1190 aa17.75■□□□□ 0.43
HTR3A-201ENST00000299961 UBR1Q8IWV7 1749 aa17.74■□□□□ 0.43
HTR3A-201ENST00000299961 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
HTR3A-201ENST00000299961 PLEKHF1Q96S99 279 aa17.73■□□□□ 0.43
HTR3A-201ENST00000299961 EDC4Q6P2E9 1401 aaKnown RBP17.73■□□□□ 0.43
HTR3A-201ENST00000299961 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
HTR3A-201ENST00000299961 ZBTB47Q9UFB7 747 aaPredicted RBP17.72■□□□□ 0.43
HTR3A-201ENST00000299961 METP08581 1390 aa17.72■□□□□ 0.43
HTR3A-201ENST00000299961 IL16Q14005 1332 aa17.72■□□□□ 0.43
HTR3A-201ENST00000299961 PPIP5K1Q6PFW1 1433 aa17.72■□□□□ 0.43
HTR3A-201ENST00000299961 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
HTR3A-201ENST00000299961 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
HTR3A-201ENST00000299961 CLUAP1Q96AJ1 413 aa17.7■□□□□ 0.42
HTR3A-201ENST00000299961 TMEM2Q9UHN6 1383 aa17.7■□□□□ 0.42
HTR3A-201ENST00000299961 MON2Q7Z3U7 1717 aa17.7■□□□□ 0.42
HTR3A-201ENST00000299961 PAK3O75914 559 aaPredicted RBP17.7■□□□□ 0.42
HTR3A-201ENST00000299961 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
HTR3A-201ENST00000299961 FRAT1Q92837 279 aaPredicted RBP17.69■□□□□ 0.42
HTR3A-201ENST00000299961 NEFMP07197 916 aa17.68■□□□□ 0.42
HTR3A-201ENST00000299961 AKAP12Q02952 1782 aa17.68■□□□□ 0.42
HTR3A-201ENST00000299961 FCHSD2O94868 740 aa17.68■□□□□ 0.42
HTR3A-201ENST00000299961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.68■□□□□ 0.42
HTR3A-201ENST00000299961 PANK1Q8TE04 598 aa17.68■□□□□ 0.42
HTR3A-201ENST00000299961 DEKP35659 375 aaKnown RBP17.67■□□□□ 0.42
HTR3A-201ENST00000299961 NPM2Q86SE8 214 aaKnown RBP17.67■□□□□ 0.42
HTR3A-201ENST00000299961 COG6Q9Y2V7 657 aa17.67■□□□□ 0.42
HTR3A-201ENST00000299961 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
HTR3A-201ENST00000299961 TXNDC2Q86VQ3 553 aa17.66■□□□□ 0.42
HTR3A-201ENST00000299961 MAP2P11137 1827 aaKnown RBP17.66■□□□□ 0.42
HTR3A-201ENST00000299961 LRRC7Q96NW7 1537 aa17.66■□□□□ 0.42
HTR3A-201ENST00000299961 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
HTR3A-201ENST00000299961 NUDT16Q96DE0 195 aaKnown RBP17.66■□□□□ 0.42
HTR3A-201ENST00000299961 DDRGK1Q96HY6 314 aa17.66■□□□□ 0.42
HTR3A-201ENST00000299961 TRIM35Q9UPQ4 493 aa17.66■□□□□ 0.42
HTR3A-201ENST00000299961 CDK12Q9NYV4 1490 aaPredicted RBP17.66■□□□□ 0.42
HTR3A-201ENST00000299961 AATKQ6ZMQ8 1374 aa17.65■□□□□ 0.42
HTR3A-201ENST00000299961 POLKQ9UBT6 870 aa17.65■□□□□ 0.42
HTR3A-201ENST00000299961 CCDC61Q9Y6R9 512 aa17.65■□□□□ 0.42
HTR3A-201ENST00000299961 PLEKHG1Q9ULL1 1385 aa17.65■□□□□ 0.42
HTR3A-201ENST00000299961 RIPK4P57078 832 aa17.64■□□□□ 0.41
HTR3A-201ENST00000299961 SKAP1Q86WV1 359 aa17.64■□□□□ 0.41
HTR3A-201ENST00000299961 C3P01024 1663 aa17.63■□□□□ 0.41
HTR3A-201ENST00000299961 ZKSCAN2Q63HK3 967 aa17.63■□□□□ 0.41
HTR3A-201ENST00000299961 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
HTR3A-201ENST00000299961 ADAMTS13Q76LX8 1427 aa17.62■□□□□ 0.41
HTR3A-201ENST00000299961 COG3Q96JB2 828 aa17.62■□□□□ 0.41
HTR3A-201ENST00000299961 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
HTR3A-201ENST00000299961 VIRMAQ69YN4 1812 aaKnown RBP17.61■□□□□ 0.41
HTR3A-201ENST00000299961 IGHDP01880 384 aa17.6■□□□□ 0.41
HTR3A-201ENST00000299961 CALD1Q05682 793 aaKnown RBP17.6■□□□□ 0.41
HTR3A-201ENST00000299961 EXOSC9Q06265 439 aaKnown RBP17.6■□□□□ 0.41
HTR3A-201ENST00000299961 TSR2Q969E8 191 aaKnown RBP17.6■□□□□ 0.41
HTR3A-201ENST00000299961 BCL2L13Q9BXK5 485 aa17.6■□□□□ 0.41
HTR3A-201ENST00000299961 PPM1GO15355 546 aaPredicted RBP17.6■□□□□ 0.41
HTR3A-201ENST00000299961 RGS3P49796 1198 aa17.6■□□□□ 0.41
HTR3A-201ENST00000299961 FTSJ3Q8IY81 847 aaKnown RBP17.6■□□□□ 0.41
HTR3A-201ENST00000299961 SMC4Q9NTJ3 1288 aa17.6■□□□□ 0.41
HTR3A-201ENST00000299961 TOPAZ1Q8N9V7 1692 aa17.6■□□□□ 0.41
HTR3A-201ENST00000299961 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
HTR3A-201ENST00000299961 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
HTR3A-201ENST00000299961 NME9Q86XW9 330 aa17.59■□□□□ 0.41
HTR3A-201ENST00000299961 DZIP1LQ8IYY4 767 aaKnown RBP17.59■□□□□ 0.41
HTR3A-201ENST00000299961 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
HTR3A-201ENST00000299961 RLBP1P12271 317 aa17.58■□□□□ 0.4
HTR3A-201ENST00000299961 C8orf34Q49A92 452 aa17.58■□□□□ 0.4
HTR3A-201ENST00000299961 NFE2L2Q16236 605 aa17.57■□□□□ 0.4
HTR3A-201ENST00000299961 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
HTR3A-201ENST00000299961 EID1Q9Y6B2 187 aa17.57■□□□□ 0.4
HTR3A-201ENST00000299961 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
HTR3A-201ENST00000299961 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
HTR3A-201ENST00000299961 IL13P35225 146 aa17.57■□□□□ 0.4
HTR3A-201ENST00000299961 ZNF428Q96B54 188 aa17.57■□□□□ 0.4
HTR3A-201ENST00000299961 SLIT1O75093 1534 aa17.56■□□□□ 0.4
HTR3A-201ENST00000299961 KIF16BQ96L93 1317 aa17.56■□□□□ 0.4
HTR3A-201ENST00000299961 LMOD3Q0VAK6 560 aa17.55■□□□□ 0.4
HTR3A-201ENST00000299961 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
HTR3A-201ENST00000299961 EMILIN1Q9Y6C2 1016 aa17.55■□□□□ 0.4
HTR3A-201ENST00000299961 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
HTR3A-201ENST00000299961 DIP2AQ14689 1571 aa17.55■□□□□ 0.4
HTR3A-201ENST00000299961 IPO8O15397 1037 aaKnown RBP17.55■□□□□ 0.4
HTR3A-201ENST00000299961 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
HTR3A-201ENST00000299961 ARHGAP23Q9P227 1491 aa17.54■□□□□ 0.4
HTR3A-201ENST00000299961 PRR36Q9H6K5 1346 aa17.54■□□□□ 0.4
HTR3A-201ENST00000299961 SSH1Q8WYL5 1049 aa17.54■□□□□ 0.4
HTR3A-201ENST00000299961 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
HTR3A-201ENST00000299961 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
HTR3A-201ENST00000299961 DDX19BQ9UMR2 479 aa17.53■□□□□ 0.4
HTR3A-201ENST00000299961 LTKP29376 864 aa17.53■□□□□ 0.4
HTR3A-201ENST00000299961 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
HTR3A-201ENST00000299961 PLEKHG3A1L390 1219 aa17.52■□□□□ 0.4
HTR3A-201ENST00000299961 HMOX1P09601 288 aa17.51■□□□□ 0.39
HTR3A-201ENST00000299961 FBLN1P23142 703 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms