RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
BCCIP-202ENST00000299130 CDK19Q9BWU1 502 aa17.44■□□□□ 0.38
BCCIP-202ENST00000299130 TERF2IPQ9NYB0 399 aa17.44■□□□□ 0.38
BCCIP-202ENST00000299130 CABP1Q9NZU7 370 aa17.44■□□□□ 0.38
BCCIP-202ENST00000299130 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
BCCIP-202ENST00000299130 DZIP1LQ8IYY4 767 aaKnown RBP17.43■□□□□ 0.38
BCCIP-202ENST00000299130 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
BCCIP-202ENST00000299130 PRKCSHP14314 528 aaPredicted RBP17.43■□□□□ 0.38
BCCIP-202ENST00000299130 SSH1Q8WYL5 1049 aa17.43■□□□□ 0.38
BCCIP-202ENST00000299130 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
BCCIP-202ENST00000299130 ANKRD26Q9UPS8 1709 aa17.43■□□□□ 0.38
BCCIP-202ENST00000299130 AAMPQ13685 434 aa17.42■□□□□ 0.38
BCCIP-202ENST00000299130 RIPK4P57078 832 aa17.42■□□□□ 0.38
BCCIP-202ENST00000299130 RWDD1Q9H446 243 aaPredicted RBP17.42■□□□□ 0.38
BCCIP-202ENST00000299130 FRAT2O75474 233 aaPredicted RBP17.41■□□□□ 0.38
BCCIP-202ENST00000299130 TRIM27P14373 513 aa17.41■□□□□ 0.38
BCCIP-202ENST00000299130 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
BCCIP-202ENST00000299130 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
BCCIP-202ENST00000299130 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
BCCIP-202ENST00000299130 DIAPH1O60610 1272 aaKnown RBP17.4■□□□□ 0.38
BCCIP-202ENST00000299130 MED14O60244 1454 aa17.4■□□□□ 0.38
BCCIP-202ENST00000299130 HDGFL2Q7Z4V5 671 aaPredicted RBP17.39■□□□□ 0.38
BCCIP-202ENST00000299130 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.39■□□□□ 0.38
BCCIP-202ENST00000299130 STAG3Q9UJ98 1225 aa17.39■□□□□ 0.37
BCCIP-202ENST00000299130 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.37
BCCIP-202ENST00000299130 PNPLA6Q8IY17 1366 aa17.38■□□□□ 0.37
BCCIP-202ENST00000299130 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
BCCIP-202ENST00000299130 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
BCCIP-202ENST00000299130 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
BCCIP-202ENST00000299130 GSE1Q14687 1217 aa17.37■□□□□ 0.37
BCCIP-202ENST00000299130 ITPRIPQ8IWB1 547 aa17.37■□□□□ 0.37
BCCIP-202ENST00000299130 ATF7IPQ6VMQ6 1270 aa17.36■□□□□ 0.37
BCCIP-202ENST00000299130 KIF20BQ96Q89 1820 aa17.36■□□□□ 0.37
BCCIP-202ENST00000299130 TMEM57Q8N5G2 664 aa17.35■□□□□ 0.37
BCCIP-202ENST00000299130 POLKQ9UBT6 870 aa17.35■□□□□ 0.37
BCCIP-202ENST00000299130 IL16Q14005 1332 aa17.35■□□□□ 0.37
BCCIP-202ENST00000299130 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
BCCIP-202ENST00000299130 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
BCCIP-202ENST00000299130 FAM69CQ0P6D2 419 aa17.33■□□□□ 0.37
BCCIP-202ENST00000299130 TBC1D32Q96NH3 1257 aa17.33■□□□□ 0.37
BCCIP-202ENST00000299130 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.37
BCCIP-202ENST00000299130 PHACTR3Q96KR7 559 aa17.33■□□□□ 0.36
BCCIP-202ENST00000299130 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
BCCIP-202ENST00000299130 A2ML1A8K2U0 1454 aa17.32■□□□□ 0.36
BCCIP-202ENST00000299130 ZMYM3Q14202 1370 aa17.32■□□□□ 0.36
BCCIP-202ENST00000299130 HMOX1P09601 288 aa17.32■□□□□ 0.36
BCCIP-202ENST00000299130 SLKQ9H2G2 1235 aaPredicted RBP17.32■□□□□ 0.36
BCCIP-202ENST00000299130 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
BCCIP-202ENST00000299130 DDX19BQ9UMR2 479 aa17.32■□□□□ 0.36
BCCIP-202ENST00000299130 FCHSD2O94868 740 aa17.31■□□□□ 0.36
BCCIP-202ENST00000299130 HDAC1Q13547 482 aaPredicted RBP17.31■□□□□ 0.36
BCCIP-202ENST00000299130 MLECQ14165 292 aa17.31■□□□□ 0.36
BCCIP-202ENST00000299130 ZBTB40Q9NUA8 1239 aa17.3■□□□□ 0.36
BCCIP-202ENST00000299130 EMILIN1Q9Y6C2 1016 aa17.3■□□□□ 0.36
BCCIP-202ENST00000299130 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
BCCIP-202ENST00000299130 TSPOAP1O95153 1857 aa17.3■□□□□ 0.36
BCCIP-202ENST00000299130 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
BCCIP-202ENST00000299130 CDC42BPGQ6DT37 1551 aa17.3■□□□□ 0.36
BCCIP-202ENST00000299130 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
BCCIP-202ENST00000299130 NCKAP5LQ9HCH0 1330 aa17.29■□□□□ 0.36
BCCIP-202ENST00000299130 BECN1Q14457 450 aa17.29■□□□□ 0.36
BCCIP-202ENST00000299130 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
BCCIP-202ENST00000299130 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
BCCIP-202ENST00000299130 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
BCCIP-202ENST00000299130 NME9Q86XW9 330 aa17.29■□□□□ 0.36
BCCIP-202ENST00000299130 TBC1D2Q9BYX2 928 aa17.29■□□□□ 0.36
BCCIP-202ENST00000299130 UPF2Q9HAU5 1272 aaKnown RBP17.29■□□□□ 0.36
BCCIP-202ENST00000299130 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
BCCIP-202ENST00000299130 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
BCCIP-202ENST00000299130 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
BCCIP-202ENST00000299130 SMC5Q8IY18 1101 aa17.27■□□□□ 0.36
BCCIP-202ENST00000299130 ANTXR1Q9H6X2 564 aa17.27■□□□□ 0.36
BCCIP-202ENST00000299130 RTN4Q9NQC3 1192 aaKnown RBP17.27■□□□□ 0.36
BCCIP-202ENST00000299130 BRPF3Q9ULD4 1205 aa17.27■□□□□ 0.36
BCCIP-202ENST00000299130 ATP7BP35670 1465 aa17.27■□□□□ 0.36
BCCIP-202ENST00000299130 TSPYL6Q8N831 410 aa17.26■□□□□ 0.35
BCCIP-202ENST00000299130 KIF16BQ96L93 1317 aa17.26■□□□□ 0.35
BCCIP-202ENST00000299130 METP08581 1390 aa17.26■□□□□ 0.35
BCCIP-202ENST00000299130 IL13P35225 146 aa17.25■□□□□ 0.35
BCCIP-202ENST00000299130 MFAP1P55081 439 aaKnown RBP17.25■□□□□ 0.35
BCCIP-202ENST00000299130 NFE2L2Q16236 605 aa17.25■□□□□ 0.35
BCCIP-202ENST00000299130 ALDH1L2Q3SY69 923 aa17.25■□□□□ 0.35
BCCIP-202ENST00000299130 TXNDC2Q86VQ3 553 aa17.25■□□□□ 0.35
BCCIP-202ENST00000299130 SPATA31D1Q6ZQQ2 1576 aa17.25■□□□□ 0.35
BCCIP-202ENST00000299130 IPO8O15397 1037 aaKnown RBP17.25■□□□□ 0.35
BCCIP-202ENST00000299130 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
BCCIP-202ENST00000299130 DIP2BQ9P265 1576 aa17.25■□□□□ 0.35
BCCIP-202ENST00000299130 CPSF1Q10570 1443 aaKnown RBP17.24■□□□□ 0.35
BCCIP-202ENST00000299130 WASLO00401 505 aaPredicted RBP17.24■□□□□ 0.35
BCCIP-202ENST00000299130 SPRYD3Q8NCJ5 442 aa17.24■□□□□ 0.35
BCCIP-202ENST00000299130 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
BCCIP-202ENST00000299130 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
BCCIP-202ENST00000299130 VAMP4O75379 141 aa17.24■□□□□ 0.35
BCCIP-202ENST00000299130 AGLP35573 1532 aa17.23■□□□□ 0.35
BCCIP-202ENST00000299130 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
BCCIP-202ENST00000299130 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
BCCIP-202ENST00000299130 CPS1P31327 1500 aa17.22■□□□□ 0.35
BCCIP-202ENST00000299130 MRPL50Q8N5N7 158 aaKnown RBP17.22■□□□□ 0.35
BCCIP-202ENST00000299130 LNPKQ9C0E8 428 aa17.22■□□□□ 0.35
BCCIP-202ENST00000299130 C1orf115Q9H7X2 142 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms