RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
CHRNE-201ENST00000293780 SLKQ9H2G2 1235 aaPredicted RBP21.49■■□□□ 1.03
CHRNE-201ENST00000293780 ABCC11Q96J66 1382 aa21.49■■□□□ 1.03
CHRNE-201ENST00000293780 SMC4Q9NTJ3 1288 aa21.48■■□□□ 1.03
CHRNE-201ENST00000293780 FYB1O15117 783 aa21.48■■□□□ 1.03
CHRNE-201ENST00000293780 SSH1Q8WYL5 1049 aa21.47■■□□□ 1.03
CHRNE-201ENST00000293780 RICTORQ6R327 1708 aa21.47■■□□□ 1.03
CHRNE-201ENST00000293780 BECN1Q14457 450 aa21.47■■□□□ 1.03
CHRNE-201ENST00000293780 TRIM27P14373 513 aa21.46■■□□□ 1.03
CHRNE-201ENST00000293780 TBC1D32Q96NH3 1257 aa21.46■■□□□ 1.03
CHRNE-201ENST00000293780 PRAM1Q96QH2 718 aa21.46■■□□□ 1.03
CHRNE-201ENST00000293780 COL3A1P02461 1466 aaPredicted RBP21.44■■□□□ 1.02
CHRNE-201ENST00000293780 UPF2Q9HAU5 1272 aaKnown RBP21.44■■□□□ 1.02
CHRNE-201ENST00000293780 YEATS2Q9ULM3 1422 aa21.43■■□□□ 1.02
CHRNE-201ENST00000293780 DIP2CQ9Y2E4 1556 aa21.43■■□□□ 1.02
CHRNE-201ENST00000293780 CT47B1P0C2W7 299 aaPredicted RBP21.43■■□□□ 1.02
CHRNE-201ENST00000293780 RIPK4P57078 832 aa21.43■■□□□ 1.02
CHRNE-201ENST00000293780 NOB1Q9ULX3 412 aaKnown RBP21.43■■□□□ 1.02
CHRNE-201ENST00000293780 ITPRIPQ8IWB1 547 aa21.43■■□□□ 1.02
CHRNE-201ENST00000293780 POGKQ9P215 609 aa21.43■■□□□ 1.02
CHRNE-201ENST00000293780 MYO5BQ9ULV0 1848 aa21.42■■□□□ 1.02
CHRNE-201ENST00000293780 SLC52A1Q9NWF4 448 aa21.42■■□□□ 1.02
CHRNE-201ENST00000293780 CD163L1Q9NR16 1453 aa21.41■■□□□ 1.02
CHRNE-201ENST00000293780 ARHGAP31Q2M1Z3 1444 aa21.41■■□□□ 1.02
CHRNE-201ENST00000293780 TBC1D2Q9BYX2 928 aa21.41■■□□□ 1.02
CHRNE-201ENST00000293780 TERF2IPQ9NYB0 399 aa21.41■■□□□ 1.02
CHRNE-201ENST00000293780 PTPRMP28827 1452 aa21.41■■□□□ 1.02
CHRNE-201ENST00000293780 FBLN1P23142 703 aa21.4■■□□□ 1.02
CHRNE-201ENST00000293780 ZFYVE9O95405 1425 aa21.4■■□□□ 1.02
CHRNE-201ENST00000293780 ZMYM3Q14202 1370 aa21.4■■□□□ 1.02
CHRNE-201ENST00000293780 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
CHRNE-201ENST00000293780 ANTXR1Q9H6X2 564 aa21.4■■□□□ 1.02
CHRNE-201ENST00000293780 TRHP20396 242 aaPredicted RBP21.39■■□□□ 1.02
CHRNE-201ENST00000293780 TMEM57Q8N5G2 664 aa21.39■■□□□ 1.01
CHRNE-201ENST00000293780 DIAPH1O60610 1272 aaKnown RBP21.38■■□□□ 1.01
CHRNE-201ENST00000293780 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
CHRNE-201ENST00000293780 ATAD2Q6PL18 1390 aa21.38■■□□□ 1.01
CHRNE-201ENST00000293780 CDK19Q9BWU1 502 aa21.38■■□□□ 1.01
CHRNE-201ENST00000293780 CABP1Q9NZU7 370 aa21.38■■□□□ 1.01
CHRNE-201ENST00000293780 DDX19BQ9UMR2 479 aa21.38■■□□□ 1.01
CHRNE-201ENST00000293780 SPRYD3Q8NCJ5 442 aa21.37■■□□□ 1.01
CHRNE-201ENST00000293780 HDAC1Q13547 482 aaPredicted RBP21.37■■□□□ 1.01
CHRNE-201ENST00000293780 YTHDC2Q9H6S0 1430 aaKnown RBP21.37■■□□□ 1.01
CHRNE-201ENST00000293780 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
CHRNE-201ENST00000293780 IL16Q14005 1332 aa21.35■■□□□ 1.01
CHRNE-201ENST00000293780 MFAP1P55081 439 aaKnown RBP21.35■■□□□ 1.01
CHRNE-201ENST00000293780 HDGFL2Q7Z4V5 671 aaPredicted RBP21.34■■□□□ 1.01
CHRNE-201ENST00000293780 TMEM131LA2VDJ0 1609 aa21.34■■□□□ 1.01
CHRNE-201ENST00000293780 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.34■■□□□ 1.01
CHRNE-201ENST00000293780 C22orf23Q9BZE7 217 aa21.33■■□□□ 1
CHRNE-201ENST00000293780 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1
CHRNE-201ENST00000293780 PNPLA6Q8IY17 1366 aa21.32■■□□□ 1
CHRNE-201ENST00000293780 SMC5Q8IY18 1101 aa21.32■■□□□ 1
CHRNE-201ENST00000293780 MED14O60244 1454 aa21.32■■□□□ 1
CHRNE-201ENST00000293780 ANKRD26Q9UPS8 1709 aa21.32■■□□□ 1
CHRNE-201ENST00000293780 PREX1Q8TCU6 1659 aa21.31■■□□□ 1
CHRNE-201ENST00000293780 PRKAR2BP31323 418 aa21.3■■□□□ 1
CHRNE-201ENST00000293780 WAPLQ7Z5K2 1190 aa21.3■■□□□ 1
CHRNE-201ENST00000293780 FCHSD2O94868 740 aa21.29■■□□□ 1
CHRNE-201ENST00000293780 RSPH6AQ9H0K4 717 aa21.29■■□□□ 1
CHRNE-201ENST00000293780 POLKQ9UBT6 870 aa21.29■■□□□ 1
CHRNE-201ENST00000293780 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
CHRNE-201ENST00000293780 IPO8O15397 1037 aaKnown RBP21.28■■□□□ 1
CHRNE-201ENST00000293780 ARHGEF40Q8TER5 1519 aa21.28■■□□□ 1
CHRNE-201ENST00000293780 PHACTR3Q96KR7 559 aa21.28■■□□□ 1
CHRNE-201ENST00000293780 KIF16BQ96L93 1317 aa21.28■■□□□ 1
CHRNE-201ENST00000293780 HMOX1P09601 288 aa21.28■■□□□ 1
CHRNE-201ENST00000293780 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
CHRNE-201ENST00000293780 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
CHRNE-201ENST00000293780 STAG3Q9UJ98 1225 aa21.28■■□□□ 1
CHRNE-201ENST00000293780 ALKQ9UM73 1620 aa21.27■■□□□ 1
CHRNE-201ENST00000293780 ALDH1L2Q3SY69 923 aa21.26■□□□□ 0.99
CHRNE-201ENST00000293780 LNPKQ9C0E8 428 aa21.26■□□□□ 0.99
CHRNE-201ENST00000293780 LRRC7Q96NW7 1537 aa21.26■□□□□ 0.99
CHRNE-201ENST00000293780 NUCB1Q02818 461 aa21.24■□□□□ 0.99
CHRNE-201ENST00000293780 KIF20BQ96Q89 1820 aa21.23■□□□□ 0.99
CHRNE-201ENST00000293780 FAM135BQ49AJ0 1406 aa21.23■□□□□ 0.99
CHRNE-201ENST00000293780 TSPYL6Q8N831 410 aa21.22■□□□□ 0.99
CHRNE-201ENST00000293780 EMILIN1Q9Y6C2 1016 aa21.22■□□□□ 0.99
CHRNE-201ENST00000293780 C1orf115Q9H7X2 142 aa21.22■□□□□ 0.99
CHRNE-201ENST00000293780 ELL2O00472 640 aaPredicted RBP21.21■□□□□ 0.99
CHRNE-201ENST00000293780 VAMP4O75379 141 aa21.21■□□□□ 0.99
CHRNE-201ENST00000293780 NFE2L2Q16236 605 aa21.21■□□□□ 0.99
CHRNE-201ENST00000293780 CHD1LQ86WJ1 897 aa21.21■□□□□ 0.99
CHRNE-201ENST00000293780 ZRANB1Q9UGI0 708 aa21.21■□□□□ 0.99
CHRNE-201ENST00000293780 MRPL50Q8N5N7 158 aaKnown RBP21.2■□□□□ 0.98
CHRNE-201ENST00000293780 ZBTB7BO15156 539 aaPredicted RBP21.19■□□□□ 0.98
CHRNE-201ENST00000293780 CDC42BPGQ6DT37 1551 aa21.19■□□□□ 0.98
CHRNE-201ENST00000293780 MAP2P11137 1827 aaKnown RBP21.18■□□□□ 0.98
CHRNE-201ENST00000293780 MCM4P33991 863 aa21.18■□□□□ 0.98
CHRNE-201ENST00000293780 NME9Q86XW9 330 aa21.18■□□□□ 0.98
CHRNE-201ENST00000293780 BRPF1P55201 1214 aaPredicted RBP21.17■□□□□ 0.98
CHRNE-201ENST00000293780 ANKRD45Q5TZF3 282 aa21.17■□□□□ 0.98
CHRNE-201ENST00000293780 IL13P35225 146 aa21.17■□□□□ 0.98
CHRNE-201ENST00000293780 MLECQ14165 292 aa21.17■□□□□ 0.98
CHRNE-201ENST00000293780 CHMP5Q9NZZ3 219 aa21.17■□□□□ 0.98
CHRNE-201ENST00000293780 PPIP5K1Q6PFW1 1433 aa21.17■□□□□ 0.98
CHRNE-201ENST00000293780 ARXQ96QS3 562 aa21.16■□□□□ 0.98
CHRNE-201ENST00000293780 MBIPQ9NS73 344 aa21.16■□□□□ 0.98
CHRNE-201ENST00000293780 HSCBQ8IWL3 235 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms