RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 KIF20BQ96Q89 1820 aa25.65■■□□□ 1.7
SCUBE1-201ENST00000290460 HDGFL2Q7Z4V5 671 aaPredicted RBP25.65■■□□□ 1.7
SCUBE1-201ENST00000290460 WAPLQ7Z5K2 1190 aa25.65■■□□□ 1.7
SCUBE1-201ENST00000290460 NEFMP07197 916 aa25.64■■□□□ 1.7
SCUBE1-201ENST00000290460 MLECQ14165 292 aa25.64■■□□□ 1.7
SCUBE1-201ENST00000290460 TRIM35Q9UPQ4 493 aa25.64■■□□□ 1.7
SCUBE1-201ENST00000290460 NCBP3Q53F19 620 aaKnown RBP25.63■■□□□ 1.69
SCUBE1-201ENST00000290460 MED14O60244 1454 aa25.63■■□□□ 1.69
SCUBE1-201ENST00000290460 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
SCUBE1-201ENST00000290460 FBLN1P23142 703 aa25.62■■□□□ 1.69
SCUBE1-201ENST00000290460 A2ML1A8K2U0 1454 aa25.62■■□□□ 1.69
SCUBE1-201ENST00000290460 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.61■■□□□ 1.69
SCUBE1-201ENST00000290460 EXOSC9Q06265 439 aaKnown RBP25.61■■□□□ 1.69
SCUBE1-201ENST00000290460 DIAPH1O60610 1272 aaKnown RBP25.59■■□□□ 1.69
SCUBE1-201ENST00000290460 PMFBP1Q8TBY8 1022 aa25.58■■□□□ 1.69
SCUBE1-201ENST00000290460 SETD1AO15047 1707 aaKnown RBP25.58■■□□□ 1.69
SCUBE1-201ENST00000290460 RIMS2Q9UQ26 1411 aa25.58■■□□□ 1.69
SCUBE1-201ENST00000290460 REREQ9P2R6 1566 aa25.57■■□□□ 1.68
SCUBE1-201ENST00000290460 AGLP35573 1532 aa25.57■■□□□ 1.68
SCUBE1-201ENST00000290460 PPM1GO15355 546 aaPredicted RBP25.57■■□□□ 1.68
SCUBE1-201ENST00000290460 RIPK4P57078 832 aa25.57■■□□□ 1.68
SCUBE1-201ENST00000290460 ZKSCAN2Q63HK3 967 aa25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 SMC4Q9NTJ3 1288 aa25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 DAXXQ9UER7 740 aaPredicted RBP25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 SPATA31D1Q6ZQQ2 1576 aa25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 PNPLA6Q8IY17 1366 aa25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 MVPQ14764 893 aaKnown RBP25.56■■□□□ 1.68
SCUBE1-201ENST00000290460 SEC24BO95487 1268 aa25.55■■□□□ 1.68
SCUBE1-201ENST00000290460 FTSJ3Q8IY81 847 aaKnown RBP25.55■■□□□ 1.68
SCUBE1-201ENST00000290460 AAMPQ13685 434 aa25.54■■□□□ 1.68
SCUBE1-201ENST00000290460 DZIP1LQ8IYY4 767 aaKnown RBP25.54■■□□□ 1.68
SCUBE1-201ENST00000290460 MAP2P11137 1827 aaKnown RBP25.54■■□□□ 1.68
SCUBE1-201ENST00000290460 SSH1Q8WYL5 1049 aa25.53■■□□□ 1.68
SCUBE1-201ENST00000290460 DLC1Q96QB1 1528 aa25.53■■□□□ 1.68
SCUBE1-201ENST00000290460 USP19O94966 1318 aa25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 LRRC7Q96NW7 1537 aa25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 PDZRN3Q9UPQ7 1066 aa25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 CT47B1P0C2W7 299 aaPredicted RBP25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 PPP6R1Q9UPN7 881 aa25.52■■□□□ 1.68
SCUBE1-201ENST00000290460 TRIM27P14373 513 aa25.51■■□□□ 1.67
SCUBE1-201ENST00000290460 POLKQ9UBT6 870 aa25.51■■□□□ 1.67
SCUBE1-201ENST00000290460 USP35Q9P2H5 1018 aa25.5■■□□□ 1.67
SCUBE1-201ENST00000290460 NRXN3Q9Y4C0 1643 aa25.5■■□□□ 1.67
SCUBE1-201ENST00000290460 RWDD1Q9H446 243 aaPredicted RBP25.49■■□□□ 1.67
SCUBE1-201ENST00000290460 ATP7BP35670 1465 aa25.49■■□□□ 1.67
SCUBE1-201ENST00000290460 PRKAR2BP31323 418 aa25.48■■□□□ 1.67
SCUBE1-201ENST00000290460 IL16Q14005 1332 aa25.48■■□□□ 1.67
SCUBE1-201ENST00000290460 METP08581 1390 aa25.47■■□□□ 1.67
SCUBE1-201ENST00000290460 NOB1Q9ULX3 412 aaKnown RBP25.47■■□□□ 1.67
SCUBE1-201ENST00000290460 CDC42BPGQ6DT37 1551 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 FCHSD2O94868 740 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 RSPH6AQ9H0K4 717 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 HMOX1P09601 288 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 TXNDC2Q86VQ3 553 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 ITPRIPQ8IWB1 547 aa25.46■■□□□ 1.67
SCUBE1-201ENST00000290460 ATF7IPQ6VMQ6 1270 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 PNNQ9H307 717 aaKnown RBP25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 ZRANB1Q9UGI0 708 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 EMILIN1Q9Y6C2 1016 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 NCKAP5LQ9HCH0 1330 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 PPIP5K1Q6PFW1 1433 aa25.45■■□□□ 1.66
SCUBE1-201ENST00000290460 NME9Q86XW9 330 aa25.44■■□□□ 1.66
SCUBE1-201ENST00000290460 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
SCUBE1-201ENST00000290460 NFKBIBQ15653 356 aa25.44■■□□□ 1.66
SCUBE1-201ENST00000290460 FAM135BQ49AJ0 1406 aa25.44■■□□□ 1.66
SCUBE1-201ENST00000290460 PHACTR3Q96KR7 559 aa25.43■■□□□ 1.66
SCUBE1-201ENST00000290460 CPSF1Q10570 1443 aaKnown RBP25.41■■□□□ 1.66
SCUBE1-201ENST00000290460 TMEM57Q8N5G2 664 aa25.4■■□□□ 1.66
SCUBE1-201ENST00000290460 THUMPD2Q9BTF0 503 aaKnown RBP25.4■■□□□ 1.66
SCUBE1-201ENST00000290460 DDX19BQ9UMR2 479 aa25.4■■□□□ 1.66
SCUBE1-201ENST00000290460 EDC4Q6P2E9 1401 aaKnown RBP25.39■■□□□ 1.66
SCUBE1-201ENST00000290460 ZMYM3Q14202 1370 aa25.39■■□□□ 1.66
SCUBE1-201ENST00000290460 NUDT16Q96DE0 195 aaKnown RBP25.38■■□□□ 1.65
SCUBE1-201ENST00000290460 ESF1Q9H501 851 aaKnown RBP25.38■■□□□ 1.65
SCUBE1-201ENST00000290460 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.36■■□□□ 1.65
SCUBE1-201ENST00000290460 CPS1P31327 1500 aa25.36■■□□□ 1.65
SCUBE1-201ENST00000290460 KIF16BQ96L93 1317 aa25.36■■□□□ 1.65
SCUBE1-201ENST00000290460 IL13P35225 146 aa25.35■■□□□ 1.65
SCUBE1-201ENST00000290460 RRS1Q15050 365 aaKnown RBP25.35■■□□□ 1.65
SCUBE1-201ENST00000290460 NFE2L2Q16236 605 aa25.35■■□□□ 1.65
SCUBE1-201ENST00000290460 HDAC1Q13547 482 aaPredicted RBP25.34■■□□□ 1.65
SCUBE1-201ENST00000290460 KIF13AQ9H1H9 1805 aa25.34■■□□□ 1.65
SCUBE1-201ENST00000290460 MON2Q7Z3U7 1717 aa25.33■■□□□ 1.65
SCUBE1-201ENST00000290460 DLG5Q8TDM6 1919 aa25.33■■□□□ 1.64
SCUBE1-201ENST00000290460 ZBTB40Q9NUA8 1239 aa25.33■■□□□ 1.64
SCUBE1-201ENST00000290460 CDK12Q9NYV4 1490 aaPredicted RBP25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 IPO8O15397 1037 aaKnown RBP25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 ALDH1L2Q3SY69 923 aa25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 KNDC1Q76NI1 1749 aa25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 CCDC61Q9Y6R9 512 aa25.32■■□□□ 1.64
SCUBE1-201ENST00000290460 COG3Q96JB2 828 aa25.31■■□□□ 1.64
SCUBE1-201ENST00000290460 TSPYL6Q8N831 410 aa25.3■■□□□ 1.64
SCUBE1-201ENST00000290460 AKAP12Q02952 1782 aa25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 ITSN1Q15811 1721 aa25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 PRR36Q9H6K5 1346 aa25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 FRAT2O75474 233 aaPredicted RBP25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 TBC1D32Q96NH3 1257 aa25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 UPF2Q9HAU5 1272 aaKnown RBP25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 ELL2O00472 640 aaPredicted RBP25.29■■□□□ 1.64
SCUBE1-201ENST00000290460 AATKQ6ZMQ8 1374 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms