RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 CCDC7Q96M83 1385 aa23.45■■□□□ 1.34
LSM11-201ENST00000286307 EXOC6Q8TAG9 804 aa23.45■■□□□ 1.34
LSM11-201ENST00000286307 CENPQQ7L2Z9 268 aaPredicted RBP23.44■■□□□ 1.34
LSM11-201ENST00000286307 MPHOSPH8Q99549 860 aa23.44■■□□□ 1.34
LSM11-201ENST00000286307 KIAA1107Q9UPP5 1409 aa23.44■■□□□ 1.34
LSM11-201ENST00000286307 DAPK1P53355 1430 aa23.44■■□□□ 1.34
LSM11-201ENST00000286307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.44■■□□□ 1.34
LSM11-201ENST00000286307 FAM161AQ3B820 660 aa23.43■■□□□ 1.34
LSM11-201ENST00000286307 TCP11L2Q8N4U5 519 aa23.43■■□□□ 1.34
LSM11-201ENST00000286307 ZPR1O75312 459 aa23.43■■□□□ 1.34
LSM11-201ENST00000286307 TMOD3Q9NYL9 352 aa23.43■■□□□ 1.34
LSM11-201ENST00000286307 KIF14Q15058 1648 aa23.42■■□□□ 1.34
LSM11-201ENST00000286307 PNISRQ8TF01 805 aaKnown RBP23.42■■□□□ 1.34
LSM11-201ENST00000286307 DENND4BO75064 1496 aaPredicted RBP23.41■■□□□ 1.34
LSM11-201ENST00000286307 SURF6O75683 361 aaKnown RBP23.41■■□□□ 1.34
LSM11-201ENST00000286307 ADAMTS8Q9UP79 889 aa23.41■■□□□ 1.34
LSM11-201ENST00000286307 PTCD1O75127 700 aaKnown RBP23.41■■□□□ 1.34
LSM11-201ENST00000286307 REC8O95072 547 aa23.4■■□□□ 1.34
LSM11-201ENST00000286307 STK11IPQ8N1F8 1099 aa23.4■■□□□ 1.34
LSM11-201ENST00000286307 FSD1Q9BTV5 496 aa23.4■■□□□ 1.34
LSM11-201ENST00000286307 ABCA10Q8WWZ4 1543 aa23.4■■□□□ 1.34
LSM11-201ENST00000286307 TPM2P07951 284 aa23.4■■□□□ 1.34
LSM11-201ENST00000286307 TWISTNBQ3B726 338 aaPredicted RBP23.4■■□□□ 1.34
LSM11-201ENST00000286307 TOM1O60784 492 aa23.39■■□□□ 1.34
LSM11-201ENST00000286307 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
LSM11-201ENST00000286307 PPP2R1AP30153 589 aa23.39■■□□□ 1.34
LSM11-201ENST00000286307 SIL1Q9H173 461 aa23.39■■□□□ 1.34
LSM11-201ENST00000286307 STARD3NLO95772 234 aa23.39■■□□□ 1.33
LSM11-201ENST00000286307 CCDC61Q9Y6R9 512 aa23.39■■□□□ 1.33
LSM11-201ENST00000286307 RRP12Q5JTH9 1297 aaKnown RBP23.39■■□□□ 1.33
LSM11-201ENST00000286307 PHF8Q9UPP1 1060 aa23.39■■□□□ 1.33
LSM11-201ENST00000286307 BICRAQ9NZM4 1560 aa23.39■■□□□ 1.33
LSM11-201ENST00000286307 MPRIPQ6WCQ1 1025 aa23.39■■□□□ 1.33
LSM11-201ENST00000286307 CCDC141Q6ZP82 1450 aa23.39■■□□□ 1.33
LSM11-201ENST00000286307 HMGB2P26583 209 aaKnown RBP23.38■■□□□ 1.33
LSM11-201ENST00000286307 PAXIP1Q6ZW49 1069 aaPredicted RBP23.38■■□□□ 1.33
LSM11-201ENST00000286307 ANKRD30BQ9BXX2 1392 aa23.38■■□□□ 1.33
LSM11-201ENST00000286307 SLC4A2P04920 1241 aa23.38■■□□□ 1.33
LSM11-201ENST00000286307 CCDC158Q5M9N0 1113 aa23.38■■□□□ 1.33
LSM11-201ENST00000286307 LNPKQ9C0E8 428 aa23.38■■□□□ 1.33
LSM11-201ENST00000286307 SLC3A2P08195 630 aaKnown RBP23.37■■□□□ 1.33
LSM11-201ENST00000286307 ZSCAN29Q8IWY8 852 aaPredicted RBP23.37■■□□□ 1.33
LSM11-201ENST00000286307 USHBP1Q8N6Y0 703 aa23.37■■□□□ 1.33
LSM11-201ENST00000286307 CCDC47Q96A33 483 aaKnown RBP23.37■■□□□ 1.33
LSM11-201ENST00000286307 CLASRPQ8N2M8 674 aaKnown RBP23.37■■□□□ 1.33
LSM11-201ENST00000286307 GNAI3P08754 354 aa23.36■■□□□ 1.33
LSM11-201ENST00000286307 CCDC57Q2TAC2 916 aa23.36■■□□□ 1.33
LSM11-201ENST00000286307 KRT28Q7Z3Y7 464 aa23.36■■□□□ 1.33
LSM11-201ENST00000286307 PANK1Q8TE04 598 aa23.36■■□□□ 1.33
LSM11-201ENST00000286307 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
LSM11-201ENST00000286307 CCDC85AQ96PX6 553 aaPredicted RBP23.36■■□□□ 1.33
LSM11-201ENST00000286307 ATAD2Q6PL18 1390 aa23.36■■□□□ 1.33
LSM11-201ENST00000286307 PCMTD1Q96MG8 357 aaPredicted RBP23.35■■□□□ 1.33
LSM11-201ENST00000286307 TMEM132AQ24JP5 1023 aa23.34■■□□□ 1.33
LSM11-201ENST00000286307 EXOSC9Q06265 439 aaKnown RBP23.34■■□□□ 1.33
LSM11-201ENST00000286307 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
LSM11-201ENST00000286307 FANCAO15360 1455 aa23.34■■□□□ 1.33
LSM11-201ENST00000286307 SAFBQ15424 915 aaKnown RBP eCLIP23.34■■□□□ 1.33
LSM11-201ENST00000286307 BCL11BQ9C0K0 894 aaPredicted RBP23.33■■□□□ 1.33
LSM11-201ENST00000286307 TSR1Q2NL82 804 aaKnown RBP23.33■■□□□ 1.33
LSM11-201ENST00000286307 CUL7Q14999 1698 aa23.33■■□□□ 1.33
LSM11-201ENST00000286307 RTN4Q9NQC3 1192 aaKnown RBP23.33■■□□□ 1.32
LSM11-201ENST00000286307 EXOC5O00471 708 aa23.33■■□□□ 1.32
LSM11-201ENST00000286307 ZBED9Q6R2W3 1325 aa23.32■■□□□ 1.32
LSM11-201ENST00000286307 CNTROBQ8N137 903 aa23.32■■□□□ 1.32
LSM11-201ENST00000286307 NINLQ9Y2I6 1382 aa23.32■■□□□ 1.32
LSM11-201ENST00000286307 TSR2Q969E8 191 aaKnown RBP23.32■■□□□ 1.32
LSM11-201ENST00000286307 SPINK5Q9NQ38 1064 aaPredicted RBP23.32■■□□□ 1.32
LSM11-201ENST00000286307 ZNF652Q9Y2D9 606 aa23.32■■□□□ 1.32
LSM11-201ENST00000286307 TPM3P06753 285 aa23.31■■□□□ 1.32
LSM11-201ENST00000286307 R3HCC1Q9Y3T6 440 aaKnown RBP23.31■■□□□ 1.32
LSM11-201ENST00000286307 URB2Q14146 1524 aaKnown RBP23.31■■□□□ 1.32
LSM11-201ENST00000286307 PRXQ9BXM0 1461 aa23.31■■□□□ 1.32
LSM11-201ENST00000286307 ATP6V1DQ9Y5K8 247 aa23.3■■□□□ 1.32
LSM11-201ENST00000286307 A0A0U1RQG5 324 aaPredicted RBP23.3■■□□□ 1.32
LSM11-201ENST00000286307 SART3Q15020 963 aaKnown RBP23.3■■□□□ 1.32
LSM11-201ENST00000286307 INTS3Q68E01 1043 aaKnown RBP23.3■■□□□ 1.32
LSM11-201ENST00000286307 MSH6P52701 1360 aa23.3■■□□□ 1.32
LSM11-201ENST00000286307 C8orf37Q96NL8 207 aa23.3■■□□□ 1.32
LSM11-201ENST00000286307 C1orf115Q9H7X2 142 aa23.3■■□□□ 1.32
LSM11-201ENST00000286307 BRMS1Q9HCU9 246 aa23.3■■□□□ 1.32
LSM11-201ENST00000286307 PHF14O94880 888 aa23.3■■□□□ 1.32
LSM11-201ENST00000286307 GNAT3A8MTJ3 354 aa23.29■■□□□ 1.32
LSM11-201ENST00000286307 IDI1Q13907 227 aa23.29■■□□□ 1.32
LSM11-201ENST00000286307 CAMSAP2Q08AD1 1489 aa23.28■■□□□ 1.32
LSM11-201ENST00000286307 IGHMBP2P38935 993 aaKnown RBP23.28■■□□□ 1.32
LSM11-201ENST00000286307 HSPA2P54652 639 aa23.28■■□□□ 1.32
LSM11-201ENST00000286307 GNAI2P04899 355 aa23.27■■□□□ 1.32
LSM11-201ENST00000286307 CADPS2Q86UW7 1296 aa23.27■■□□□ 1.32
LSM11-201ENST00000286307 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.27■■□□□ 1.32
LSM11-201ENST00000286307 VPS37CA5D8V6 355 aaPredicted RBP23.26■■□□□ 1.31
LSM11-201ENST00000286307 ERC1Q8IUD2 1116 aa23.26■■□□□ 1.31
LSM11-201ENST00000286307 AK7Q96M32 723 aa23.25■■□□□ 1.31
LSM11-201ENST00000286307 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
LSM11-201ENST00000286307 RBM19Q9Y4C8 960 aaKnown RBP23.25■■□□□ 1.31
LSM11-201ENST00000286307 XBP1P17861 261 aa23.25■■□□□ 1.31
LSM11-201ENST00000286307 TIAM1Q13009 1591 aa23.25■■□□□ 1.31
LSM11-201ENST00000286307 TTLL12Q14166 644 aaPredicted RBP23.24■■□□□ 1.31
LSM11-201ENST00000286307 SRCIN1Q9C0H9 1055 aa23.24■■□□□ 1.31
LSM11-201ENST00000286307 TNRQ92752 1358 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms