RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 NKTRP30414 1462 aaKnown RBP17.77■□□□□ 0.44
ACER3-201ENST00000278544 PIK3R4Q99570 1358 aa17.77■□□□□ 0.44
ACER3-201ENST00000278544 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.43
ACER3-201ENST00000278544 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
ACER3-201ENST00000278544 ZNF692Q9BU19 519 aaPredicted RBP17.75■□□□□ 0.43
ACER3-201ENST00000278544 IRX6P78412 446 aaPredicted RBP17.75■□□□□ 0.43
ACER3-201ENST00000278544 LTV1Q96GA3 475 aaPredicted RBP17.75■□□□□ 0.43
ACER3-201ENST00000278544 PLEKHG3A1L390 1219 aa17.74■□□□□ 0.43
ACER3-201ENST00000278544 CHD2O14647 1828 aaKnown RBP17.74■□□□□ 0.43
ACER3-201ENST00000278544 HMOX1P09601 288 aa17.73■□□□□ 0.43
ACER3-201ENST00000278544 NINLQ9Y2I6 1382 aa17.73■□□□□ 0.43
ACER3-201ENST00000278544 APAF1O14727 1248 aa17.73■□□□□ 0.43
ACER3-201ENST00000278544 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
ACER3-201ENST00000278544 KNDC1Q76NI1 1749 aa17.73■□□□□ 0.43
ACER3-201ENST00000278544 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
ACER3-201ENST00000278544 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
ACER3-201ENST00000278544 POLKQ9UBT6 870 aa17.72■□□□□ 0.43
ACER3-201ENST00000278544 CPSF1Q10570 1443 aaKnown RBP17.72■□□□□ 0.43
ACER3-201ENST00000278544 CDCA7LQ96GN5 454 aa17.71■□□□□ 0.43
ACER3-201ENST00000278544 CABLES1Q8TDN4 633 aa17.71■□□□□ 0.43
ACER3-201ENST00000278544 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
ACER3-201ENST00000278544 EDC4Q6P2E9 1401 aaKnown RBP17.69■□□□□ 0.42
ACER3-201ENST00000278544 USP6P35125 1406 aa17.69■□□□□ 0.42
ACER3-201ENST00000278544 NALCNQ8IZF0 1738 aa17.69■□□□□ 0.42
ACER3-201ENST00000278544 NPC1L1Q9UHC9 1359 aa17.69■□□□□ 0.42
ACER3-201ENST00000278544 HSP90AB2PQ58FF8 381 aa17.68■□□□□ 0.42
ACER3-201ENST00000278544 KRT28Q7Z3Y7 464 aa17.68■□□□□ 0.42
ACER3-201ENST00000278544 USP32Q8NFA0 1604 aa17.67■□□□□ 0.42
ACER3-201ENST00000278544 STRCQ7RTU9 1775 aa17.67■□□□□ 0.42
ACER3-201ENST00000278544 MSH6P52701 1360 aa17.66■□□□□ 0.42
ACER3-201ENST00000278544 SUPT16HQ9Y5B9 1047 aaKnown RBP17.66■□□□□ 0.42
ACER3-201ENST00000278544 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
ACER3-201ENST00000278544 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
ACER3-201ENST00000278544 AMPHP49418 695 aa17.66■□□□□ 0.42
ACER3-201ENST00000278544 ZC3H6P61129 1189 aaKnown RBP17.65■□□□□ 0.42
ACER3-201ENST00000278544 CADPS2Q86UW7 1296 aa17.65■□□□□ 0.42
ACER3-201ENST00000278544 CDC42BPGQ6DT37 1551 aa17.65■□□□□ 0.42
ACER3-201ENST00000278544 PIP4K2BP78356 416 aa17.64■□□□□ 0.41
ACER3-201ENST00000278544 SLAIN2Q9P270 581 aa17.63■□□□□ 0.41
ACER3-201ENST00000278544 ZBED9Q6R2W3 1325 aa17.63■□□□□ 0.41
ACER3-201ENST00000278544 NSD2O96028 1365 aa17.62■□□□□ 0.41
ACER3-201ENST00000278544 NUDCQ9Y266 331 aa17.62■□□□□ 0.41
ACER3-201ENST00000278544 MAP3K19Q56UN5 1328 aa17.62■□□□□ 0.41
ACER3-201ENST00000278544 AEBP1Q8IUX7 1158 aa17.61■□□□□ 0.41
ACER3-201ENST00000278544 TCP11L2Q8N4U5 519 aa17.61■□□□□ 0.41
ACER3-201ENST00000278544 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
ACER3-201ENST00000278544 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
ACER3-201ENST00000278544 C1orf167Q5SNV9 1468 aa17.61■□□□□ 0.41
ACER3-201ENST00000278544 ADGRB2O60241 1585 aa17.6■□□□□ 0.41
ACER3-201ENST00000278544 BRINP3Q76B58 766 aa17.59■□□□□ 0.41
ACER3-201ENST00000278544 POLR3AO14802 1390 aaPredicted RBP17.59■□□□□ 0.41
ACER3-201ENST00000278544 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
ACER3-201ENST00000278544 ITSN1Q15811 1721 aa17.59■□□□□ 0.41
ACER3-201ENST00000278544 HAP1P54257 671 aaPredicted RBP17.58■□□□□ 0.4
ACER3-201ENST00000278544 FKBP8Q14318 412 aa17.58■□□□□ 0.4
ACER3-201ENST00000278544 CHRNA2Q15822 529 aa17.58■□□□□ 0.4
ACER3-201ENST00000278544 SULT6B1Q6IMI4 303 aa17.57■□□□□ 0.4
ACER3-201ENST00000278544 SPINK5Q9NQ38 1064 aaPredicted RBP17.57■□□□□ 0.4
ACER3-201ENST00000278544 ANKARQ7Z5J8 1434 aa17.57■□□□□ 0.4
ACER3-201ENST00000278544 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
ACER3-201ENST00000278544 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
ACER3-201ENST00000278544 FMN2Q9NZ56 1722 aa17.56■□□□□ 0.4
ACER3-201ENST00000278544 LRRC7Q96NW7 1537 aa17.56■□□□□ 0.4
ACER3-201ENST00000278544 THUMPD2Q9BTF0 503 aaKnown RBP17.56■□□□□ 0.4
ACER3-201ENST00000278544 TTC21AQ8NDW8 1320 aa17.56■□□□□ 0.4
ACER3-201ENST00000278544 MAPK8IP3Q9UPT6 1336 aa17.56■□□□□ 0.4
ACER3-201ENST00000278544 MAP2P11137 1827 aaKnown RBP17.55■□□□□ 0.4
ACER3-201ENST00000278544 LAS1LQ9Y4W2 734 aaKnown RBP17.55■□□□□ 0.4
ACER3-201ENST00000278544 MST1RQ04912 1400 aa17.55■□□□□ 0.4
ACER3-201ENST00000278544 GCP02774 474 aa17.55■□□□□ 0.4
ACER3-201ENST00000278544 RUNDC1Q96C34 613 aa17.54■□□□□ 0.4
ACER3-201ENST00000278544 LRRC59Q96AG4 307 aaKnown RBP17.54■□□□□ 0.4
ACER3-201ENST00000278544 KIF20BQ96Q89 1820 aa17.53■□□□□ 0.4
ACER3-201ENST00000278544 SSH2Q76I76 1423 aa17.53■□□□□ 0.4
ACER3-201ENST00000278544 IL13P35225 146 aa17.52■□□□□ 0.4
ACER3-201ENST00000278544 DCTN1Q14203 1278 aa17.52■□□□□ 0.4
ACER3-201ENST00000278544 TOPAZ1Q8N9V7 1692 aa17.52■□□□□ 0.39
ACER3-201ENST00000278544 NWD1Q149M9 1564 aa17.52■□□□□ 0.39
ACER3-201ENST00000278544 OVOS2A0A0J9YW53 1432 aa17.51■□□□□ 0.39
ACER3-201ENST00000278544 OVOS2Q6IE36 1432 aa17.51■□□□□ 0.39
ACER3-201ENST00000278544 MON2Q7Z3U7 1717 aa17.51■□□□□ 0.39
ACER3-201ENST00000278544 AKAP12Q02952 1782 aa17.51■□□□□ 0.39
ACER3-201ENST00000278544 NPHP3Q7Z494 1330 aa17.51■□□□□ 0.39
ACER3-201ENST00000278544 RIPK4P57078 832 aa17.51■□□□□ 0.39
ACER3-201ENST00000278544 FAM83GA6ND36 823 aa17.5■□□□□ 0.39
ACER3-201ENST00000278544 NEFMP07197 916 aa17.5■□□□□ 0.39
ACER3-201ENST00000278544 HOXC9P31274 260 aa17.49■□□□□ 0.39
ACER3-201ENST00000278544 AXIN2Q9Y2T1 843 aa17.49■□□□□ 0.39
ACER3-201ENST00000278544 PLIN1O60240 522 aa17.48■□□□□ 0.39
ACER3-201ENST00000278544 NEFLP07196 543 aa17.48■□□□□ 0.39
ACER3-201ENST00000278544 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
ACER3-201ENST00000278544 BLMP54132 1417 aaPredicted RBP17.48■□□□□ 0.39
ACER3-201ENST00000278544 GOLGA2Q08379 1002 aa17.48■□□□□ 0.39
ACER3-201ENST00000278544 EYA1Q99502 592 aa17.48■□□□□ 0.39
ACER3-201ENST00000278544 TSR2Q969E8 191 aaKnown RBP17.47■□□□□ 0.39
ACER3-201ENST00000278544 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
ACER3-201ENST00000278544 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
ACER3-201ENST00000278544 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
ACER3-201ENST00000278544 USP35Q9P2H5 1018 aa17.47■□□□□ 0.39
ACER3-201ENST00000278544 CSB-PGBD3P0DP91 1061 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms