RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 CD163L1Q9NR16 1453 aa30.82■■■□□ 2.53
SH3GL1-201ENST00000269886 TRIM35Q9UPQ4 493 aa30.82■■■□□ 2.52
SH3GL1-201ENST00000269886 COL3A1P02461 1466 aaPredicted RBP30.82■■■□□ 2.52
SH3GL1-201ENST00000269886 EXOSC9Q06265 439 aaKnown RBP30.8■■■□□ 2.52
SH3GL1-201ENST00000269886 MVPQ14764 893 aaKnown RBP30.79■■■□□ 2.52
SH3GL1-201ENST00000269886 ZKSCAN2Q63HK3 967 aa30.79■■■□□ 2.52
SH3GL1-201ENST00000269886 PDZRN3Q9UPQ7 1066 aa30.79■■■□□ 2.52
SH3GL1-201ENST00000269886 NLRP1Q9C000 1473 aa30.78■■■□□ 2.52
SH3GL1-201ENST00000269886 CDK19Q9BWU1 502 aa30.78■■■□□ 2.52
SH3GL1-201ENST00000269886 FTSJ3Q8IY81 847 aaKnown RBP30.77■■■□□ 2.52
SH3GL1-201ENST00000269886 DZIP1LQ8IYY4 767 aaKnown RBP30.76■■■□□ 2.51
SH3GL1-201ENST00000269886 SMC4Q9NTJ3 1288 aa30.76■■■□□ 2.51
SH3GL1-201ENST00000269886 RWDD1Q9H446 243 aaPredicted RBP30.76■■■□□ 2.51
SH3GL1-201ENST00000269886 CABP1Q9NZU7 370 aa30.76■■■□□ 2.51
SH3GL1-201ENST00000269886 STAG3Q9UJ98 1225 aa30.75■■■□□ 2.51
SH3GL1-201ENST00000269886 HDGFL2Q7Z4V5 671 aaPredicted RBP30.74■■■□□ 2.51
SH3GL1-201ENST00000269886 ALKQ9UM73 1620 aa30.74■■■□□ 2.51
SH3GL1-201ENST00000269886 CT47B1P0C2W7 299 aaPredicted RBP30.73■■■□□ 2.51
SH3GL1-201ENST00000269886 CLTCQ00610 1675 aaKnown RBP30.73■■■□□ 2.51
SH3GL1-201ENST00000269886 DIAPH1O60610 1272 aaKnown RBP30.73■■■□□ 2.51
SH3GL1-201ENST00000269886 SSH1Q8WYL5 1049 aa30.73■■■□□ 2.51
SH3GL1-201ENST00000269886 MED14O60244 1454 aa30.72■■■□□ 2.51
SH3GL1-201ENST00000269886 RIPK4P57078 832 aa30.72■■■□□ 2.51
SH3GL1-201ENST00000269886 ANKRD26Q9UPS8 1709 aa30.72■■■□□ 2.51
SH3GL1-201ENST00000269886 TRIM27P14373 513 aa30.71■■■□□ 2.51
SH3GL1-201ENST00000269886 ARHGEF40Q8TER5 1519 aa30.7■■■□□ 2.5
SH3GL1-201ENST00000269886 FBLN1P23142 703 aa30.69■■■□□ 2.5
SH3GL1-201ENST00000269886 TSPOAP1O95153 1857 aa30.69■■■□□ 2.5
SH3GL1-201ENST00000269886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.68■■■□□ 2.5
SH3GL1-201ENST00000269886 PNPLA6Q8IY17 1366 aa30.67■■■□□ 2.5
SH3GL1-201ENST00000269886 WAPLQ7Z5K2 1190 aa30.67■■■□□ 2.5
SH3GL1-201ENST00000269886 FRAT2O75474 233 aaPredicted RBP30.66■■■□□ 2.5
SH3GL1-201ENST00000269886 NOB1Q9ULX3 412 aaKnown RBP30.65■■■□□ 2.5
SH3GL1-201ENST00000269886 IL16Q14005 1332 aa30.65■■■□□ 2.5
SH3GL1-201ENST00000269886 GSE1Q14687 1217 aa30.65■■■□□ 2.5
SH3GL1-201ENST00000269886 ITPRIPQ8IWB1 547 aa30.65■■■□□ 2.5
SH3GL1-201ENST00000269886 ATF7IPQ6VMQ6 1270 aa30.64■■■□□ 2.5
SH3GL1-201ENST00000269886 ZMYM3Q14202 1370 aa30.61■■■□□ 2.49
SH3GL1-201ENST00000269886 DDX19BQ9UMR2 479 aa30.6■■■□□ 2.49
SH3GL1-201ENST00000269886 KIF20BQ96Q89 1820 aa30.6■■■□□ 2.49
SH3GL1-201ENST00000269886 PNNQ9H307 717 aaKnown RBP30.59■■■□□ 2.49
SH3GL1-201ENST00000269886 POLKQ9UBT6 870 aa30.59■■■□□ 2.49
SH3GL1-201ENST00000269886 FCHSD2O94868 740 aa30.58■■■□□ 2.49
SH3GL1-201ENST00000269886 UPF2Q9HAU5 1272 aaKnown RBP30.58■■■□□ 2.49
SH3GL1-201ENST00000269886 PRKAR2BP31323 418 aa30.58■■■□□ 2.49
SH3GL1-201ENST00000269886 TMEM57Q8N5G2 664 aa30.58■■■□□ 2.49
SH3GL1-201ENST00000269886 KIF13AQ9H1H9 1805 aa30.58■■■□□ 2.49
SH3GL1-201ENST00000269886 BECN1Q14457 450 aa30.57■■■□□ 2.48
SH3GL1-201ENST00000269886 TBC1D32Q96NH3 1257 aa30.57■■■□□ 2.48
SH3GL1-201ENST00000269886 LRRC7Q96NW7 1537 aa30.57■■■□□ 2.48
SH3GL1-201ENST00000269886 RSPH6AQ9H0K4 717 aa30.56■■■□□ 2.48
SH3GL1-201ENST00000269886 HDAC1Q13547 482 aaPredicted RBP30.55■■■□□ 2.48
SH3GL1-201ENST00000269886 IL27Q8NEV9 243 aa30.55■■■□□ 2.48
SH3GL1-201ENST00000269886 A2ML1A8K2U0 1454 aa30.55■■■□□ 2.48
SH3GL1-201ENST00000269886 HMOX1P09601 288 aa30.53■■■□□ 2.48
SH3GL1-201ENST00000269886 SLKQ9H2G2 1235 aaPredicted RBP30.53■■■□□ 2.48
SH3GL1-201ENST00000269886 MLECQ14165 292 aa30.52■■■□□ 2.48
SH3GL1-201ENST00000269886 PHACTR3Q96KR7 559 aa30.52■■■□□ 2.48
SH3GL1-201ENST00000269886 RIMS2Q9UQ26 1411 aa30.52■■■□□ 2.48
SH3GL1-201ENST00000269886 KIF16BQ96L93 1317 aa30.51■■■□□ 2.48
SH3GL1-201ENST00000269886 ZBTB40Q9NUA8 1239 aa30.51■■■□□ 2.48
SH3GL1-201ENST00000269886 FAM135BQ49AJ0 1406 aa30.51■■■□□ 2.47
SH3GL1-201ENST00000269886 EMILIN1Q9Y6C2 1016 aa30.5■■■□□ 2.47
SH3GL1-201ENST00000269886 CDC42BPGQ6DT37 1551 aa30.5■■■□□ 2.47
SH3GL1-201ENST00000269886 ATP7BP35670 1465 aa30.5■■■□□ 2.47
SH3GL1-201ENST00000269886 IPO8O15397 1037 aaKnown RBP30.49■■■□□ 2.47
SH3GL1-201ENST00000269886 THUMPD2Q9BTF0 503 aaKnown RBP30.49■■■□□ 2.47
SH3GL1-201ENST00000269886 DLC1Q96QB1 1528 aa30.49■■■□□ 2.47
SH3GL1-201ENST00000269886 ALDH1L2Q3SY69 923 aa30.47■■■□□ 2.47
SH3GL1-201ENST00000269886 SMC5Q8IY18 1101 aa30.47■■■□□ 2.47
SH3GL1-201ENST00000269886 ZRANB1Q9UGI0 708 aa30.47■■■□□ 2.47
SH3GL1-201ENST00000269886 NME9Q86XW9 330 aa30.46■■■□□ 2.47
SH3GL1-201ENST00000269886 TBC1D2Q9BYX2 928 aa30.46■■■□□ 2.47
SH3GL1-201ENST00000269886 MAP2P11137 1827 aaKnown RBP30.45■■■□□ 2.47
SH3GL1-201ENST00000269886 PPP6R1Q9UPN7 881 aa30.45■■■□□ 2.47
SH3GL1-201ENST00000269886 SETD1AO15047 1707 aaKnown RBP30.45■■■□□ 2.47
SH3GL1-201ENST00000269886 NFE2L2Q16236 605 aa30.45■■■□□ 2.46
SH3GL1-201ENST00000269886 WASLO00401 505 aaPredicted RBP30.44■■■□□ 2.46
SH3GL1-201ENST00000269886 SPATA31D1Q6ZQQ2 1576 aa30.44■■■□□ 2.46
SH3GL1-201ENST00000269886 NCKAP5LQ9HCH0 1330 aa30.43■■■□□ 2.46
SH3GL1-201ENST00000269886 AGLP35573 1532 aa30.43■■■□□ 2.46
SH3GL1-201ENST00000269886 PPIP5K1Q6PFW1 1433 aa30.43■■■□□ 2.46
SH3GL1-201ENST00000269886 MFAP1P55081 439 aaKnown RBP30.42■■■□□ 2.46
SH3GL1-201ENST00000269886 TXNDC2Q86VQ3 553 aa30.42■■■□□ 2.46
SH3GL1-201ENST00000269886 ANTXR1Q9H6X2 564 aa30.42■■■□□ 2.46
SH3GL1-201ENST00000269886 METP08581 1390 aa30.42■■■□□ 2.46
SH3GL1-201ENST00000269886 CPSF1Q10570 1443 aaKnown RBP30.42■■■□□ 2.46
SH3GL1-201ENST00000269886 IL13P35225 146 aa30.41■■■□□ 2.46
SH3GL1-201ENST00000269886 TSPYL6Q8N831 410 aa30.4■■■□□ 2.46
SH3GL1-201ENST00000269886 REREQ9P2R6 1566 aa30.4■■■□□ 2.46
SH3GL1-201ENST00000269886 EDC4Q6P2E9 1401 aaKnown RBP30.4■■■□□ 2.46
SH3GL1-201ENST00000269886 VAMP4O75379 141 aa30.39■■■□□ 2.46
SH3GL1-201ENST00000269886 C22orf23Q9BZE7 217 aa30.39■■■□□ 2.46
SH3GL1-201ENST00000269886 BRPF3Q9ULD4 1205 aa30.39■■■□□ 2.46
SH3GL1-201ENST00000269886 ELL2O00472 640 aaPredicted RBP30.38■■■□□ 2.45
SH3GL1-201ENST00000269886 RTN4Q9NQC3 1192 aaKnown RBP30.38■■■□□ 2.45
SH3GL1-201ENST00000269886 NUDT16Q96DE0 195 aaKnown RBP30.37■■■□□ 2.45
SH3GL1-201ENST00000269886 RRS1Q15050 365 aaKnown RBP30.36■■■□□ 2.45
SH3GL1-201ENST00000269886 BRPF1P55201 1214 aaPredicted RBP30.36■■■□□ 2.45
SH3GL1-201ENST00000269886 NUCB1Q02818 461 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms