RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 MCM3P25205 808 aa14.34□□□□□ -0.11
SRRM4-201ENST00000267260 FEZ1Q99689 392 aa14.34□□□□□ -0.11
SRRM4-201ENST00000267260 WASHC2CQ9Y4E1 1318 aa14.34□□□□□ -0.11
SRRM4-201ENST00000267260 COG6Q9Y2V7 657 aa14.34□□□□□ -0.11
SRRM4-201ENST00000267260 CUX1P39880 1505 aa14.34□□□□□ -0.11
SRRM4-201ENST00000267260 SEPT11Q9NVA2 429 aaKnown RBP14.33□□□□□ -0.11
SRRM4-201ENST00000267260 MAP2K1Q02750 393 aaPredicted RBP14.33□□□□□ -0.12
SRRM4-201ENST00000267260 CCDC102AQ96A19 550 aa14.33□□□□□ -0.12
SRRM4-201ENST00000267260 BCL2L13Q9BXK5 485 aa14.33□□□□□ -0.12
SRRM4-201ENST00000267260 CFAP57Q96MR6 1250 aa14.33□□□□□ -0.12
SRRM4-201ENST00000267260 PANK3Q9H999 370 aa14.33□□□□□ -0.12
SRRM4-201ENST00000267260 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
SRRM4-201ENST00000267260 MICALCLQ6ZW33 695 aa14.32□□□□□ -0.12
SRRM4-201ENST00000267260 FAM193AP78312 1265 aa14.32□□□□□ -0.12
SRRM4-201ENST00000267260 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
SRRM4-201ENST00000267260 USP47Q96K76 1375 aa14.32□□□□□ -0.12
SRRM4-201ENST00000267260 SERPINC1P01008 464 aa14.32□□□□□ -0.12
SRRM4-201ENST00000267260 TICAM2Q86XR7 235 aa14.32□□□□□ -0.12
SRRM4-201ENST00000267260 TBC1D2BQ9UPU7 963 aa14.32□□□□□ -0.12
SRRM4-201ENST00000267260 AEBP1Q8IUX7 1158 aa14.31□□□□□ -0.12
SRRM4-201ENST00000267260 DNAI2Q9GZS0 605 aa14.31□□□□□ -0.12
SRRM4-201ENST00000267260 KIF3BO15066 747 aa14.31□□□□□ -0.12
SRRM4-201ENST00000267260 SPC24Q8NBT2 197 aa14.31□□□□□ -0.12
SRRM4-201ENST00000267260 GBP3Q9H0R5 595 aa14.31□□□□□ -0.12
SRRM4-201ENST00000267260 FKBP5Q13451 457 aaPredicted RBP14.31□□□□□ -0.12
SRRM4-201ENST00000267260 MAP9Q49MG5 647 aa14.31□□□□□ -0.12
SRRM4-201ENST00000267260 MAPK8IP2Q13387 824 aaPredicted RBP14.31□□□□□ -0.12
SRRM4-201ENST00000267260 TMCO3Q6UWJ1 677 aa14.31□□□□□ -0.12
SRRM4-201ENST00000267260 DHX37Q8IY37 1157 aaKnown RBP14.31□□□□□ -0.12
SRRM4-201ENST00000267260 FOSBP53539 338 aa14.31□□□□□ -0.12
SRRM4-201ENST00000267260 RUNDC1Q96C34 613 aa14.3□□□□□ -0.12
SRRM4-201ENST00000267260 KRT18P05783 430 aaKnown RBP14.3□□□□□ -0.12
SRRM4-201ENST00000267260 EIF2S2P20042 333 aaKnown RBP14.3□□□□□ -0.12
SRRM4-201ENST00000267260 BRPF1P55201 1214 aaPredicted RBP14.3□□□□□ -0.12
SRRM4-201ENST00000267260 IKQ13123 557 aaPredicted RBP14.3□□□□□ -0.12
SRRM4-201ENST00000267260 PLIN1O60240 522 aa14.3□□□□□ -0.12
SRRM4-201ENST00000267260 JAKMIP3Q5VZ66 844 aa14.3□□□□□ -0.12
SRRM4-201ENST00000267260 EXOC6Q8TAG9 804 aa14.3□□□□□ -0.12
SRRM4-201ENST00000267260 CFAP45Q9UL16 551 aa14.3□□□□□ -0.12
SRRM4-201ENST00000267260 GNAI1P63096 354 aa14.29□□□□□ -0.12
SRRM4-201ENST00000267260 GPATCH11Q8N954 259 aa14.29□□□□□ -0.12
SRRM4-201ENST00000267260 BCCIPQ9P287 314 aaKnown RBP eCLIP14.29□□□□□ -0.12
SRRM4-201ENST00000267260 WASHC4Q2M389 1173 aa14.29□□□□□ -0.12
SRRM4-201ENST00000267260 CRACR2AQ9BSW2 395 aa14.29□□□□□ -0.12
SRRM4-201ENST00000267260 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
SRRM4-201ENST00000267260 ERC1Q8IUD2 1116 aa14.29□□□□□ -0.12
SRRM4-201ENST00000267260 DIAPH1O60610 1272 aaKnown RBP14.28□□□□□ -0.12
SRRM4-201ENST00000267260 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
SRRM4-201ENST00000267260 L3MBTL2Q969R5 705 aa14.28□□□□□ -0.12
SRRM4-201ENST00000267260 KIF2AO00139 706 aaPredicted RBP14.28□□□□□ -0.12
SRRM4-201ENST00000267260 VGFO15240 615 aaPredicted RBP14.28□□□□□ -0.12
SRRM4-201ENST00000267260 ZNF397Q8NF99 534 aaPredicted RBP14.28□□□□□ -0.12
SRRM4-201ENST00000267260 MSH5O43196 834 aa14.27□□□□□ -0.12
SRRM4-201ENST00000267260 RIPK4P57078 832 aa14.27□□□□□ -0.12
SRRM4-201ENST00000267260 CCDC148Q8NFR7 591 aa14.27□□□□□ -0.13
SRRM4-201ENST00000267260 TNMDQ9H2S6 317 aa14.27□□□□□ -0.13
SRRM4-201ENST00000267260 BRPF3Q9ULD4 1205 aa14.27□□□□□ -0.13
SRRM4-201ENST00000267260 PDCL3Q9H2J4 239 aa14.27□□□□□ -0.13
SRRM4-201ENST00000267260 UBTFL1P0CB47 393 aaPredicted RBP14.26□□□□□ -0.13
SRRM4-201ENST00000267260 ELL2O00472 640 aaPredicted RBP14.26□□□□□ -0.13
SRRM4-201ENST00000267260 RIC3Q7Z5B4 369 aa14.26□□□□□ -0.13
SRRM4-201ENST00000267260 LUZP1Q86V48 1076 aa14.26□□□□□ -0.13
SRRM4-201ENST00000267260 TRIM22Q8IYM9 498 aa14.25□□□□□ -0.13
SRRM4-201ENST00000267260 FMNL2Q96PY5 1086 aa14.25□□□□□ -0.13
SRRM4-201ENST00000267260 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.25□□□□□ -0.13
SRRM4-201ENST00000267260 TRAK1Q9UPV9 953 aa14.25□□□□□ -0.13
SRRM4-201ENST00000267260 STK38Q15208 465 aa14.25□□□□□ -0.13
SRRM4-201ENST00000267260 CETN2P41208 172 aa14.25□□□□□ -0.13
SRRM4-201ENST00000267260 WDR33Q9C0J8 1336 aaKnown RBP14.25□□□□□ -0.13
SRRM4-201ENST00000267260 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
SRRM4-201ENST00000267260 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
SRRM4-201ENST00000267260 CDKL5O76039 1030 aa14.24□□□□□ -0.13
SRRM4-201ENST00000267260 UBXN4Q92575 508 aa14.24□□□□□ -0.13
SRRM4-201ENST00000267260 TSPYL4Q9UJ04 414 aa14.24□□□□□ -0.13
SRRM4-201ENST00000267260 SMTNL1A8MU46 457 aa14.24□□□□□ -0.13
SRRM4-201ENST00000267260 IMMTQ16891 758 aaKnown RBP14.24□□□□□ -0.13
SRRM4-201ENST00000267260 NEUROD6Q96NK8 337 aa14.24□□□□□ -0.13
SRRM4-201ENST00000267260 SCAPERQ9BY12 1400 aa14.23□□□□□ -0.13
SRRM4-201ENST00000267260 ANKRD18BA2A2Z9 1011 aa14.23□□□□□ -0.13
SRRM4-201ENST00000267260 POLR3GO15318 223 aaPredicted RBP14.23□□□□□ -0.13
SRRM4-201ENST00000267260 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
SRRM4-201ENST00000267260 ST20-MTHFSA0A0A6YYL1 179 aa14.23□□□□□ -0.13
SRRM4-201ENST00000267260 GRPEL1Q9HAV7 217 aa14.23□□□□□ -0.13
SRRM4-201ENST00000267260 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
SRRM4-201ENST00000267260 PRPF40AO75400 957 aaKnown RBP14.23□□□□□ -0.13
SRRM4-201ENST00000267260 KRT85P78386 507 aa14.23□□□□□ -0.13
SRRM4-201ENST00000267260 SMG6Q86US8 1419 aaKnown RBP14.23□□□□□ -0.13
SRRM4-201ENST00000267260 WIZO95785 1651 aa14.22□□□□□ -0.13
SRRM4-201ENST00000267260 GCOM1H8Y6P7 765 aaPredicted RBP14.22□□□□□ -0.13
SRRM4-201ENST00000267260 MYZAPP0CAP1 466 aa14.22□□□□□ -0.13
SRRM4-201ENST00000267260 FYB1O15117 783 aa14.22□□□□□ -0.13
SRRM4-201ENST00000267260 FSD1Q9BTV5 496 aa14.22□□□□□ -0.13
SRRM4-201ENST00000267260 FAM177A1Q8N128 213 aaPredicted RBP14.22□□□□□ -0.13
SRRM4-201ENST00000267260 GNL3LQ9NVN8 582 aaKnown RBP14.22□□□□□ -0.13
SRRM4-201ENST00000267260 RRBP1Q9P2E9 1410 aaKnown RBP14.22□□□□□ -0.13
SRRM4-201ENST00000267260 KIF6Q6ZMV9 814 aa14.22□□□□□ -0.13
SRRM4-201ENST00000267260 SMC1AQ14683 1233 aaKnown RBP14.22□□□□□ -0.13
SRRM4-201ENST00000267260 CGNQ9P2M7 1197 aaKnown RBP14.22□□□□□ -0.13
SRRM4-201ENST00000267260 IPO4Q8TEX9 1081 aaKnown RBP14.21□□□□□ -0.13
SRRM4-201ENST00000267260 DDX23Q9BUQ8 820 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms