RNA–Protein interactions for RNA: ENST00000265993.13

TCTN3-201, Transcript of tectonic family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-201ENST00000265993 RIPK4P57078 832 aa13.96□□□□□ -0.18
TCTN3-201ENST00000265993 SMC4Q9NTJ3 1288 aa13.96□□□□□ -0.18
TCTN3-201ENST00000265993 ADGRB2O60241 1585 aa13.95□□□□□ -0.18
TCTN3-201ENST00000265993 COL3A1P02461 1466 aaPredicted RBP13.95□□□□□ -0.18
TCTN3-201ENST00000265993 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
TCTN3-201ENST00000265993 CLTCQ00610 1675 aaKnown RBP13.95□□□□□ -0.18
TCTN3-201ENST00000265993 DIAPH1O60610 1272 aaKnown RBP13.94□□□□□ -0.18
TCTN3-201ENST00000265993 FTSJ3Q8IY81 847 aaKnown RBP13.94□□□□□ -0.18
TCTN3-201ENST00000265993 SSH1Q8WYL5 1049 aa13.94□□□□□ -0.18
TCTN3-201ENST00000265993 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
TCTN3-201ENST00000265993 ZRANB1Q9UGI0 708 aa13.94□□□□□ -0.18
TCTN3-201ENST00000265993 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
TCTN3-201ENST00000265993 HMOX1P09601 288 aa13.94□□□□□ -0.18
TCTN3-201ENST00000265993 ARHGEF40Q8TER5 1519 aa13.94□□□□□ -0.18
TCTN3-201ENST00000265993 USP19O94966 1318 aa13.93□□□□□ -0.18
TCTN3-201ENST00000265993 TRIM27P14373 513 aa13.93□□□□□ -0.18
TCTN3-201ENST00000265993 THUMPD2Q9BTF0 503 aaKnown RBP13.93□□□□□ -0.18
TCTN3-201ENST00000265993 PDZRN3Q9UPQ7 1066 aa13.93□□□□□ -0.18
TCTN3-201ENST00000265993 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
TCTN3-201ENST00000265993 ZKSCAN2Q63HK3 967 aa13.92□□□□□ -0.18
TCTN3-201ENST00000265993 TXNDC2Q86VQ3 553 aa13.92□□□□□ -0.18
TCTN3-201ENST00000265993 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
TCTN3-201ENST00000265993 EMILIN1Q9Y6C2 1016 aa13.92□□□□□ -0.18
TCTN3-201ENST00000265993 MAP2P11137 1827 aaKnown RBP13.92□□□□□ -0.18
TCTN3-201ENST00000265993 PRKAR2BP31323 418 aa13.92□□□□□ -0.18
TCTN3-201ENST00000265993 POLKQ9UBT6 870 aa13.92□□□□□ -0.18
TCTN3-201ENST00000265993 DIP2BQ9P265 1576 aa13.91□□□□□ -0.18
TCTN3-201ENST00000265993 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
TCTN3-201ENST00000265993 ITPRIPQ8IWB1 547 aa13.91□□□□□ -0.18
TCTN3-201ENST00000265993 ANKRD26Q9UPS8 1709 aa13.91□□□□□ -0.18
TCTN3-201ENST00000265993 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
TCTN3-201ENST00000265993 NME9Q86XW9 330 aa13.91□□□□□ -0.18
TCTN3-201ENST00000265993 PHACTR3Q96KR7 559 aa13.91□□□□□ -0.18
TCTN3-201ENST00000265993 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
TCTN3-201ENST00000265993 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
TCTN3-201ENST00000265993 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.18
TCTN3-201ENST00000265993 NFKBIBQ15653 356 aa13.9□□□□□ -0.18
TCTN3-201ENST00000265993 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
TCTN3-201ENST00000265993 RIMBP3CA6NJZ7 1639 aa13.9□□□□□ -0.19
TCTN3-201ENST00000265993 RIMBP3BA6NNM3 1639 aa13.9□□□□□ -0.19
TCTN3-201ENST00000265993 RIMBP3Q9UFD9 1639 aa13.9□□□□□ -0.19
TCTN3-201ENST00000265993 METP08581 1390 aa13.89□□□□□ -0.19
TCTN3-201ENST00000265993 LRRC7Q96NW7 1537 aa13.88□□□□□ -0.19
TCTN3-201ENST00000265993 NUTM2FA1L443 756 aa13.88□□□□□ -0.19
TCTN3-201ENST00000265993 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
TCTN3-201ENST00000265993 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
TCTN3-201ENST00000265993 PNPLA6Q8IY17 1366 aa13.87□□□□□ -0.19
TCTN3-201ENST00000265993 TMEM57Q8N5G2 664 aa13.87□□□□□ -0.19
TCTN3-201ENST00000265993 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
TCTN3-201ENST00000265993 RSPH6AQ9H0K4 717 aa13.87□□□□□ -0.19
TCTN3-201ENST00000265993 RWDD1Q9H446 243 aaPredicted RBP13.87□□□□□ -0.19
TCTN3-201ENST00000265993 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
TCTN3-201ENST00000265993 MED14O60244 1454 aa13.86□□□□□ -0.19
TCTN3-201ENST00000265993 PPIP5K1Q6PFW1 1433 aa13.85□□□□□ -0.19
TCTN3-201ENST00000265993 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
TCTN3-201ENST00000265993 FRAT2O75474 233 aaPredicted RBP13.84□□□□□ -0.19
TCTN3-201ENST00000265993 FCHSD2O94868 740 aa13.84□□□□□ -0.19
TCTN3-201ENST00000265993 TSPYL6Q8N831 410 aa13.84□□□□□ -0.19
TCTN3-201ENST00000265993 PLPPR3Q6T4P5 718 aa13.84□□□□□ -0.19
TCTN3-201ENST00000265993 SLKQ9H2G2 1235 aaPredicted RBP13.84□□□□□ -0.19
TCTN3-201ENST00000265993 USP35Q9P2H5 1018 aa13.84□□□□□ -0.19
TCTN3-201ENST00000265993 NRXN3Q9Y4C0 1643 aa13.83□□□□□ -0.2
TCTN3-201ENST00000265993 SPATA31D1Q6ZQQ2 1576 aa13.83□□□□□ -0.2
TCTN3-201ENST00000265993 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
TCTN3-201ENST00000265993 NUDT16Q96DE0 195 aaKnown RBP13.83□□□□□ -0.2
TCTN3-201ENST00000265993 ESF1Q9H501 851 aaKnown RBP13.83□□□□□ -0.2
TCTN3-201ENST00000265993 DCTN1Q14203 1278 aa13.83□□□□□ -0.2
TCTN3-201ENST00000265993 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
TCTN3-201ENST00000265993 DDX19BQ9UMR2 479 aa13.82□□□□□ -0.2
TCTN3-201ENST00000265993 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
TCTN3-201ENST00000265993 ZMYM3Q14202 1370 aa13.82□□□□□ -0.2
TCTN3-201ENST00000265993 SOX12O15370 315 aa13.82□□□□□ -0.2
TCTN3-201ENST00000265993 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
TCTN3-201ENST00000265993 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
TCTN3-201ENST00000265993 CPS1P31327 1500 aa13.81□□□□□ -0.2
TCTN3-201ENST00000265993 IL16Q14005 1332 aa13.81□□□□□ -0.2
TCTN3-201ENST00000265993 ATP7BP35670 1465 aa13.81□□□□□ -0.2
TCTN3-201ENST00000265993 IL13P35225 146 aa13.81□□□□□ -0.2
TCTN3-201ENST00000265993 AAMPQ13685 434 aa13.81□□□□□ -0.2
TCTN3-201ENST00000265993 AGLP35573 1532 aa13.81□□□□□ -0.2
TCTN3-201ENST00000265993 SPRYD3Q8NCJ5 442 aa13.8□□□□□ -0.2
TCTN3-201ENST00000265993 PRR36Q9H6K5 1346 aa13.8□□□□□ -0.2
TCTN3-201ENST00000265993 NFE2L2Q16236 605 aa13.8□□□□□ -0.2
TCTN3-201ENST00000265993 ZBTB40Q9NUA8 1239 aa13.8□□□□□ -0.2
TCTN3-201ENST00000265993 CPSF1Q10570 1443 aaKnown RBP13.79□□□□□ -0.2
TCTN3-201ENST00000265993 DLG5Q8TDM6 1919 aa13.79□□□□□ -0.2
TCTN3-201ENST00000265993 DLC1Q96QB1 1528 aa13.79□□□□□ -0.2
TCTN3-201ENST00000265993 COG3Q96JB2 828 aa13.79□□□□□ -0.2
TCTN3-201ENST00000265993 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
TCTN3-201ENST00000265993 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
TCTN3-201ENST00000265993 MFAP1P55081 439 aaKnown RBP13.78□□□□□ -0.2
TCTN3-201ENST00000265993 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
TCTN3-201ENST00000265993 LNPKQ9C0E8 428 aa13.78□□□□□ -0.2
TCTN3-201ENST00000265993 MBIPQ9NS73 344 aa13.78□□□□□ -0.2
TCTN3-201ENST00000265993 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
TCTN3-201ENST00000265993 EDC4Q6P2E9 1401 aaKnown RBP13.78□□□□□ -0.2
TCTN3-201ENST00000265993 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
TCTN3-201ENST00000265993 VAMP4O75379 141 aa13.77□□□□□ -0.2
TCTN3-201ENST00000265993 IL27Q8NEV9 243 aa13.77□□□□□ -0.2
TCTN3-201ENST00000265993 TBC1D32Q96NH3 1257 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms