RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 ANKRD36BQ8N2N9 1353 aa21.96■■□□□ 1.11
TRAM1-201ENST00000262213 ZC3H13Q5T200 1668 aaKnown RBP21.96■■□□□ 1.11
TRAM1-201ENST00000262213 SETBP1Q9Y6X0 1596 aa21.96■■□□□ 1.11
TRAM1-201ENST00000262213 PLEKHF1Q96S99 279 aa21.96■■□□□ 1.11
TRAM1-201ENST00000262213 ADGRB1O14514 1584 aa21.95■■□□□ 1.1
TRAM1-201ENST00000262213 SMC5Q8IY18 1101 aa21.94■■□□□ 1.1
TRAM1-201ENST00000262213 NAP1L5Q96NT1 182 aaPredicted RBP21.94■■□□□ 1.1
TRAM1-201ENST00000262213 NPATQ14207 1427 aa21.94■■□□□ 1.1
TRAM1-201ENST00000262213 CT47B1P0C2W7 299 aaPredicted RBP21.93■■□□□ 1.1
TRAM1-201ENST00000262213 C1orf115Q9H7X2 142 aa21.93■■□□□ 1.1
TRAM1-201ENST00000262213 ZBTB40Q9NUA8 1239 aa21.93■■□□□ 1.1
TRAM1-201ENST00000262213 HSP90AB1P08238 724 aaKnown RBP21.93■■□□□ 1.1
TRAM1-201ENST00000262213 A0A1W2PP64 1363 aa21.92■■□□□ 1.1
TRAM1-201ENST00000262213 MINK1Q8N4C8 1332 aaPredicted RBP21.91■■□□□ 1.1
TRAM1-201ENST00000262213 TULP4Q9NRJ4 1543 aa21.91■■□□□ 1.1
TRAM1-201ENST00000262213 PPLO60437 1756 aa21.91■■□□□ 1.1
TRAM1-201ENST00000262213 ZNF692Q9BU19 519 aaPredicted RBP21.91■■□□□ 1.1
TRAM1-201ENST00000262213 HSP90AA1P07900 732 aaKnown RBP21.9■■□□□ 1.1
TRAM1-201ENST00000262213 PNNQ9H307 717 aaKnown RBP21.9■■□□□ 1.1
TRAM1-201ENST00000262213 KIDINS220Q9ULH0 1771 aa21.9■■□□□ 1.1
TRAM1-201ENST00000262213 ADGRB2O60241 1585 aa21.9■■□□□ 1.1
TRAM1-201ENST00000262213 FBLN1P23142 703 aa21.89■■□□□ 1.1
TRAM1-201ENST00000262213 ANKRD45Q5TZF3 282 aa21.89■■□□□ 1.1
TRAM1-201ENST00000262213 NSD2O96028 1365 aa21.89■■□□□ 1.09
TRAM1-201ENST00000262213 DDX11L8A8MPP1 907 aa21.89■■□□□ 1.09
TRAM1-201ENST00000262213 IPO8O15397 1037 aaKnown RBP21.89■■□□□ 1.09
TRAM1-201ENST00000262213 NUCB1Q02818 461 aa21.89■■□□□ 1.09
TRAM1-201ENST00000262213 CHD1LQ86WJ1 897 aa21.89■■□□□ 1.09
TRAM1-201ENST00000262213 USP32Q8NFA0 1604 aa21.89■■□□□ 1.09
TRAM1-201ENST00000262213 UBE2Q2Q8WVN8 375 aa21.88■■□□□ 1.09
TRAM1-201ENST00000262213 TNPO1Q92973 898 aaKnown RBP21.88■■□□□ 1.09
TRAM1-201ENST00000262213 MRE11P49959 708 aa21.88■■□□□ 1.09
TRAM1-201ENST00000262213 GRPEL1Q9HAV7 217 aa21.88■■□□□ 1.09
TRAM1-201ENST00000262213 GLI2P10070 1586 aa21.87■■□□□ 1.09
TRAM1-201ENST00000262213 KIF16BQ96L93 1317 aa21.87■■□□□ 1.09
TRAM1-201ENST00000262213 ELL2O00472 640 aaPredicted RBP21.87■■□□□ 1.09
TRAM1-201ENST00000262213 FYB1O15117 783 aa21.87■■□□□ 1.09
TRAM1-201ENST00000262213 DIAPH1O60610 1272 aaKnown RBP21.87■■□□□ 1.09
TRAM1-201ENST00000262213 THUMPD2Q9BTF0 503 aaKnown RBP21.87■■□□□ 1.09
TRAM1-201ENST00000262213 VGFO15240 615 aaPredicted RBP21.86■■□□□ 1.09
TRAM1-201ENST00000262213 CYB5RLQ6IPT4 315 aa21.86■■□□□ 1.09
TRAM1-201ENST00000262213 CFAP74Q9C0B2 1584 aa21.86■■□□□ 1.09
TRAM1-201ENST00000262213 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
TRAM1-201ENST00000262213 RBM42Q9BTD8 480 aaKnown RBP21.85■■□□□ 1.09
TRAM1-201ENST00000262213 CD2BP2O95400 341 aaKnown RBP21.84■■□□□ 1.09
TRAM1-201ENST00000262213 RBM25P49756 843 aaKnown RBP21.84■■□□□ 1.09
TRAM1-201ENST00000262213 NCBP3Q53F19 620 aaKnown RBP21.84■■□□□ 1.09
TRAM1-201ENST00000262213 ABCC11Q96J66 1382 aa21.84■■□□□ 1.09
TRAM1-201ENST00000262213 PRKAR2BP31323 418 aa21.82■■□□□ 1.08
TRAM1-201ENST00000262213 LMTK2Q8IWU2 1503 aa21.82■■□□□ 1.08
TRAM1-201ENST00000262213 HMOX1P09601 288 aa21.82■■□□□ 1.08
TRAM1-201ENST00000262213 GAS2L3Q86XJ1 694 aa21.82■■□□□ 1.08
TRAM1-201ENST00000262213 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRAM1-201ENST00000262213 ARHGEF28Q8N1W1 1705 aaKnown RBP21.81■■□□□ 1.08
TRAM1-201ENST00000262213 TERF2IPQ9NYB0 399 aa21.81■■□□□ 1.08
TRAM1-201ENST00000262213 IL16Q14005 1332 aa21.81■■□□□ 1.08
TRAM1-201ENST00000262213 CLCN1P35523 988 aa21.81■■□□□ 1.08
TRAM1-201ENST00000262213 PRAM1Q96QH2 718 aa21.81■■□□□ 1.08
TRAM1-201ENST00000262213 DDIT3P35638 169 aa21.8■■□□□ 1.08
TRAM1-201ENST00000262213 SNX21Q969T3 373 aa21.8■■□□□ 1.08
TRAM1-201ENST00000262213 GBP4Q96PP9 640 aa21.8■■□□□ 1.08
TRAM1-201ENST00000262213 CAMSAP1Q5T5Y3 1602 aa21.8■■□□□ 1.08
TRAM1-201ENST00000262213 COL3A1P02461 1466 aaPredicted RBP21.79■■□□□ 1.08
TRAM1-201ENST00000262213 TSPYL6Q8N831 410 aa21.79■■□□□ 1.08
TRAM1-201ENST00000262213 PUS7Q96PZ0 661 aaKnown RBP21.79■■□□□ 1.08
TRAM1-201ENST00000262213 BMP2KLQ5H9B9 411 aa21.78■■□□□ 1.08
TRAM1-201ENST00000262213 TBC1D9Q6ZT07 1266 aa21.78■■□□□ 1.08
TRAM1-201ENST00000262213 KIF2CQ99661 725 aa21.78■■□□□ 1.08
TRAM1-201ENST00000262213 NCOA3Q9Y6Q9 1424 aa21.78■■□□□ 1.08
TRAM1-201ENST00000262213 IDI1Q13907 227 aa21.77■■□□□ 1.08
TRAM1-201ENST00000262213 ERBB4Q15303 1308 aa21.77■■□□□ 1.08
TRAM1-201ENST00000262213 ALDH1L2Q3SY69 923 aa21.77■■□□□ 1.08
TRAM1-201ENST00000262213 TRIM44Q96DX7 344 aaPredicted RBP21.77■■□□□ 1.08
TRAM1-201ENST00000262213 PPIP5K1Q6PFW1 1433 aa21.77■■□□□ 1.08
TRAM1-201ENST00000262213 RAB3GAP1Q15042 981 aa21.76■■□□□ 1.07
TRAM1-201ENST00000262213 ZBTB7BO15156 539 aaPredicted RBP21.76■■□□□ 1.07
TRAM1-201ENST00000262213 SSFA2P28290 1259 aa21.76■■□□□ 1.07
TRAM1-201ENST00000262213 PHACTR3Q96KR7 559 aa21.76■■□□□ 1.07
TRAM1-201ENST00000262213 CABP1Q9NZU7 370 aa21.76■■□□□ 1.07
TRAM1-201ENST00000262213 ESPNB1AK53 854 aa21.75■■□□□ 1.07
TRAM1-201ENST00000262213 HDGFL2Q7Z4V5 671 aaPredicted RBP21.75■■□□□ 1.07
TRAM1-201ENST00000262213 K7ELQ4 463 aaPredicted RBP21.74■■□□□ 1.07
TRAM1-201ENST00000262213 GAS2L2Q8NHY3 880 aa21.74■■□□□ 1.07
TRAM1-201ENST00000262213 RAPGEF3O95398 923 aa21.74■■□□□ 1.07
TRAM1-201ENST00000262213 NEO1Q92859 1461 aa21.74■■□□□ 1.07
TRAM1-201ENST00000262213 POGZQ7Z3K3 1410 aa21.73■■□□□ 1.07
TRAM1-201ENST00000262213 SIRT2Q8IXJ6 389 aa21.73■■□□□ 1.07
TRAM1-201ENST00000262213 MRPL50Q8N5N7 158 aaKnown RBP21.73■■□□□ 1.07
TRAM1-201ENST00000262213 CIZ1Q9ULV3 898 aaPredicted RBP21.73■■□□□ 1.07
TRAM1-201ENST00000262213 FRMPD1Q5SYB0 1578 aa21.73■■□□□ 1.07
TRAM1-201ENST00000262213 VAMP4O75379 141 aa21.72■■□□□ 1.07
TRAM1-201ENST00000262213 GCC1Q96CN9 775 aa21.72■■□□□ 1.07
TRAM1-201ENST00000262213 ABCC3O15438 1527 aa21.72■■□□□ 1.07
TRAM1-201ENST00000262213 FCHSD2O94868 740 aa21.72■■□□□ 1.07
TRAM1-201ENST00000262213 CDK19Q9BWU1 502 aa21.72■■□□□ 1.07
TRAM1-201ENST00000262213 NEXMIFQ5QGS0 1516 aa21.72■■□□□ 1.07
TRAM1-201ENST00000262213 SIGLEC1Q9BZZ2 1709 aa21.71■■□□□ 1.07
TRAM1-201ENST00000262213 ATAD2Q6PL18 1390 aa21.71■■□□□ 1.07
TRAM1-201ENST00000262213 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
TRAM1-201ENST00000262213 LRRC7Q96NW7 1537 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms