RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
USHBP1-201ENST00000252597 GBP4Q96PP9 640 aa14.94□□□□□ -0.02
USHBP1-201ENST00000252597 MLH3Q9UHC1 1453 aa14.94□□□□□ -0.02
USHBP1-201ENST00000252597 PRKAR2BP31323 418 aa14.94□□□□□ -0.02
USHBP1-201ENST00000252597 NOS1P29475 1434 aa14.94□□□□□ -0.02
USHBP1-201ENST00000252597 EVC2Q86UK5 1308 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 NEO1Q92859 1461 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 SSFA2P28290 1259 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 DNAJC5Q9H3Z4 198 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 YEATS2Q9ULM3 1422 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 GOLGA6L22H0YM25 854 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 MRE11P49959 708 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 DCTN1Q14203 1278 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 CEP152O94986 1710 aa14.93□□□□□ -0.02
USHBP1-201ENST00000252597 VWDEQ8N2E2 1590 aa14.92□□□□□ -0.02
USHBP1-201ENST00000252597 DDX11L8A8MPP1 907 aa14.92□□□□□ -0.02
USHBP1-201ENST00000252597 DIAPH1O60610 1272 aaKnown RBP14.92□□□□□ -0.02
USHBP1-201ENST00000252597 EIF2AK4Q9P2K8 1649 aaKnown RBP14.92□□□□□ -0.02
USHBP1-201ENST00000252597 MCTP1Q6DN14 999 aa14.92□□□□□ -0.02
USHBP1-201ENST00000252597 CHD1LQ86WJ1 897 aa14.92□□□□□ -0.02
USHBP1-201ENST00000252597 FRMPD1Q5SYB0 1578 aa14.92□□□□□ -0.02
USHBP1-201ENST00000252597 TSPOAP1O95153 1857 aa14.92□□□□□ -0.02
USHBP1-201ENST00000252597 ABCA6Q8N139 1617 aa14.91□□□□□ -0.02
USHBP1-201ENST00000252597 CD2BP2O95400 341 aaKnown RBP14.91□□□□□ -0.02
USHBP1-201ENST00000252597 CHAMP1Q96JM3 812 aa14.91□□□□□ -0.02
USHBP1-201ENST00000252597 PPRC1Q5VV67 1664 aaKnown RBP14.91□□□□□ -0.02
USHBP1-201ENST00000252597 ATAD2Q6PL18 1390 aa14.91□□□□□ -0.02
USHBP1-201ENST00000252597 ESPNB1AK53 854 aa14.91□□□□□ -0.02
USHBP1-201ENST00000252597 GLIPR1L2Q4G1C9 344 aa14.91□□□□□ -0.02
USHBP1-201ENST00000252597 UBE2Q2Q8WVN8 375 aa14.91□□□□□ -0.02
USHBP1-201ENST00000252597 NPATQ14207 1427 aa14.9□□□□□ -0.02
USHBP1-201ENST00000252597 EFCAB6Q5THR3 1501 aa14.9□□□□□ -0.02
USHBP1-201ENST00000252597 GAS2L3Q86XJ1 694 aa14.9□□□□□ -0.02
USHBP1-201ENST00000252597 NGEFQ8N5V2 710 aa14.9□□□□□ -0.02
USHBP1-201ENST00000252597 RBM10P98175 930 aaKnown RBP14.89□□□□□ -0.03
USHBP1-201ENST00000252597 TSPYL6Q8N831 410 aa14.89□□□□□ -0.03
USHBP1-201ENST00000252597 PRAM1Q96QH2 718 aa14.89□□□□□ -0.03
USHBP1-201ENST00000252597 SLC4A10Q6U841 1118 aa14.89□□□□□ -0.03
USHBP1-201ENST00000252597 CABP1Q9NZU7 370 aa14.89□□□□□ -0.03
USHBP1-201ENST00000252597 CAVIN1Q6NZI2 390 aaKnown RBP14.89□□□□□ -0.03
USHBP1-201ENST00000252597 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
USHBP1-201ENST00000252597 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
USHBP1-201ENST00000252597 FAM83GA6ND36 823 aa14.87□□□□□ -0.03
USHBP1-201ENST00000252597 RNF214Q8ND24 703 aa14.87□□□□□ -0.03
USHBP1-201ENST00000252597 TRIM35Q9UPQ4 493 aa14.87□□□□□ -0.03
USHBP1-201ENST00000252597 ERVK-7P63135 1459 aa14.87□□□□□ -0.03
USHBP1-201ENST00000252597 SMARCA5O60264 1052 aaPredicted RBP14.87□□□□□ -0.03
USHBP1-201ENST00000252597 MADDQ8WXG6 1647 aa14.87□□□□□ -0.03
USHBP1-201ENST00000252597 MSNP26038 577 aaKnown RBP14.86□□□□□ -0.03
USHBP1-201ENST00000252597 PLCB2Q00722 1185 aa14.86□□□□□ -0.03
USHBP1-201ENST00000252597 TBC1D9Q6ZT07 1266 aa14.86□□□□□ -0.03
USHBP1-201ENST00000252597 GAS2L2Q8NHY3 880 aa14.86□□□□□ -0.03
USHBP1-201ENST00000252597 NECTIN2Q92692 538 aa14.86□□□□□ -0.03
USHBP1-201ENST00000252597 RNF17Q9BXT8 1623 aaKnown RBP14.86□□□□□ -0.03
USHBP1-201ENST00000252597 MAP3K4Q9Y6R4 1608 aa14.86□□□□□ -0.03
USHBP1-201ENST00000252597 HDGFL2Q7Z4V5 671 aaPredicted RBP14.86□□□□□ -0.03
USHBP1-201ENST00000252597 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
USHBP1-201ENST00000252597 NINLQ9Y2I6 1382 aa14.85□□□□□ -0.03
USHBP1-201ENST00000252597 NASPP49321 788 aaPredicted RBP14.85□□□□□ -0.03
USHBP1-201ENST00000252597 PHACTR3Q96KR7 559 aa14.85□□□□□ -0.03
USHBP1-201ENST00000252597 ZBTB40Q9NUA8 1239 aa14.85□□□□□ -0.03
USHBP1-201ENST00000252597 DIP2CQ9Y2E4 1556 aa14.85□□□□□ -0.03
USHBP1-201ENST00000252597 ERBB4Q15303 1308 aa14.84□□□□□ -0.03
USHBP1-201ENST00000252597 CALD1Q05682 793 aaKnown RBP14.84□□□□□ -0.03
USHBP1-201ENST00000252597 KRT24Q2M2I5 525 aa14.84□□□□□ -0.03
USHBP1-201ENST00000252597 RRS1Q15050 365 aaKnown RBP14.84□□□□□ -0.03
USHBP1-201ENST00000252597 STAC3Q96MF2 364 aa14.84□□□□□ -0.03
USHBP1-201ENST00000252597 KIF16BQ96L93 1317 aa14.84□□□□□ -0.03
USHBP1-201ENST00000252597 TSHZ3Q63HK5 1081 aa14.84□□□□□ -0.03
USHBP1-201ENST00000252597 ABCC3O15438 1527 aa14.83□□□□□ -0.03
USHBP1-201ENST00000252597 DTNBO60941 627 aa14.83□□□□□ -0.04
USHBP1-201ENST00000252597 PRPF40AO75400 957 aaKnown RBP14.83□□□□□ -0.04
USHBP1-201ENST00000252597 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
USHBP1-201ENST00000252597 EMILIN1Q9Y6C2 1016 aa14.83□□□□□ -0.04
USHBP1-201ENST00000252597 K7ELQ4 463 aaPredicted RBP14.83□□□□□ -0.04
USHBP1-201ENST00000252597 FYB1O15117 783 aa14.83□□□□□ -0.04
USHBP1-201ENST00000252597 FBXO31Q5XUX0 539 aaPredicted RBP14.83□□□□□ -0.04
USHBP1-201ENST00000252597 WAPLQ7Z5K2 1190 aa14.83□□□□□ -0.04
USHBP1-201ENST00000252597 KIF1BO60333 1816 aa14.83□□□□□ -0.04
USHBP1-201ENST00000252597 VGFO15240 615 aaPredicted RBP14.82□□□□□ -0.04
USHBP1-201ENST00000252597 PTMAP06454 111 aaKnown RBP14.82□□□□□ -0.04
USHBP1-201ENST00000252597 OTUD7AQ8TE49 926 aaPredicted RBP14.82□□□□□ -0.04
USHBP1-201ENST00000252597 ESF1Q9H501 851 aaKnown RBP14.82□□□□□ -0.04
USHBP1-201ENST00000252597 C14orf93Q9H972 538 aaKnown RBP14.82□□□□□ -0.04
USHBP1-201ENST00000252597 FAM13BQ9NYF5 915 aa14.82□□□□□ -0.04
USHBP1-201ENST00000252597 MIS18AQ9NYP9 233 aa14.82□□□□□ -0.04
USHBP1-201ENST00000252597 RBM27Q9P2N5 1060 aaKnown RBP14.82□□□□□ -0.04
USHBP1-201ENST00000252597 LMTK2Q8IWU2 1503 aa14.82□□□□□ -0.04
USHBP1-201ENST00000252597 NUCB1Q02818 461 aa14.82□□□□□ -0.04
USHBP1-201ENST00000252597 IDI1Q13907 227 aa14.82□□□□□ -0.04
USHBP1-201ENST00000252597 SMC5Q8IY18 1101 aa14.82□□□□□ -0.04
USHBP1-201ENST00000252597 RICTORQ6R327 1708 aa14.82□□□□□ -0.04
USHBP1-201ENST00000252597 HDAC1Q13547 482 aaPredicted RBP14.82□□□□□ -0.04
USHBP1-201ENST00000252597 PKP1Q13835 747 aa14.82□□□□□ -0.04
USHBP1-201ENST00000252597 DIP2BQ9P265 1576 aa14.81□□□□□ -0.04
USHBP1-201ENST00000252597 MROH2AA6NES4 1674 aa14.81□□□□□ -0.04
USHBP1-201ENST00000252597 TWISTNBQ3B726 338 aaPredicted RBP14.81□□□□□ -0.04
USHBP1-201ENST00000252597 NPC1L1Q9UHC9 1359 aa14.81□□□□□ -0.04
USHBP1-201ENST00000252597 CLCN1P35523 988 aa14.81□□□□□ -0.04
USHBP1-201ENST00000252597 R3HCC1Q9Y3T6 440 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms