RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 MAP2P11137 1827 aaKnown RBP22.95■■□□□ 1.27
PCCB-201ENST00000251654 SSH2Q76I76 1423 aa22.95■■□□□ 1.26
PCCB-201ENST00000251654 ADGRL3Q9HAR2 1447 aa22.95■■□□□ 1.26
PCCB-201ENST00000251654 CCDC146Q8IYE0 955 aa22.94■■□□□ 1.26
PCCB-201ENST00000251654 PNPLA6Q8IY17 1366 aa22.94■■□□□ 1.26
PCCB-201ENST00000251654 KDM4FA0A1W2PPD8 638 aa22.93■■□□□ 1.26
PCCB-201ENST00000251654 FKBP8Q14318 412 aa22.93■■□□□ 1.26
PCCB-201ENST00000251654 NEFLP07196 543 aa22.92■■□□□ 1.26
PCCB-201ENST00000251654 TTC21BQ7Z4L5 1316 aa22.92■■□□□ 1.26
PCCB-201ENST00000251654 ZNF521Q96K83 1311 aa22.92■■□□□ 1.26
PCCB-201ENST00000251654 ZRANB1Q9UGI0 708 aa22.92■■□□□ 1.26
PCCB-201ENST00000251654 OVOS2A0A0J9YW53 1432 aa22.9■■□□□ 1.26
PCCB-201ENST00000251654 OVOS2Q6IE36 1432 aa22.9■■□□□ 1.26
PCCB-201ENST00000251654 AATKQ6ZMQ8 1374 aa22.9■■□□□ 1.26
PCCB-201ENST00000251654 IQSEC2Q5JU85 1478 aa22.9■■□□□ 1.26
PCCB-201ENST00000251654 POLKQ9UBT6 870 aa22.89■■□□□ 1.26
PCCB-201ENST00000251654 APAF1O14727 1248 aa22.89■■□□□ 1.25
PCCB-201ENST00000251654 PMFBP1Q8TBY8 1022 aa22.89■■□□□ 1.25
PCCB-201ENST00000251654 RBM33Q96EV2 1170 aaKnown RBP22.89■■□□□ 1.25
PCCB-201ENST00000251654 CDCA7LQ96GN5 454 aa22.89■■□□□ 1.25
PCCB-201ENST00000251654 COG3Q96JB2 828 aa22.89■■□□□ 1.25
PCCB-201ENST00000251654 LMTK3Q96Q04 1460 aa22.88■■□□□ 1.25
PCCB-201ENST00000251654 FBLN1P23142 703 aa22.87■■□□□ 1.25
PCCB-201ENST00000251654 CDK12Q9NYV4 1490 aaPredicted RBP22.86■■□□□ 1.25
PCCB-201ENST00000251654 PIK3C2AO00443 1686 aa22.86■■□□□ 1.25
PCCB-201ENST00000251654 STRCP1A6NGW2 1772 aa22.85■■□□□ 1.25
PCCB-201ENST00000251654 NGEFQ8N5V2 710 aa22.85■■□□□ 1.25
PCCB-201ENST00000251654 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
PCCB-201ENST00000251654 TTC21AQ8NDW8 1320 aa22.84■■□□□ 1.25
PCCB-201ENST00000251654 HSPA2P54652 639 aa22.84■■□□□ 1.25
PCCB-201ENST00000251654 RUNDC1Q96C34 613 aa22.84■■□□□ 1.25
PCCB-201ENST00000251654 U2AF1L5P0DN76 240 aaPredicted RBP22.83■■□□□ 1.25
PCCB-201ENST00000251654 U2AF1Q01081 240 aaKnown RBP eCLIP22.83■■□□□ 1.25
PCCB-201ENST00000251654 RNF123Q5XPI4 1314 aa22.83■■□□□ 1.25
PCCB-201ENST00000251654 EMILIN1Q9Y6C2 1016 aa22.82■■□□□ 1.24
PCCB-201ENST00000251654 USP54Q70EL1 1684 aa22.81■■□□□ 1.24
PCCB-201ENST00000251654 DIAPH1O60610 1272 aaKnown RBP22.81■■□□□ 1.24
PCCB-201ENST00000251654 USP31Q70CQ4 1352 aa22.81■■□□□ 1.24
PCCB-201ENST00000251654 STRCQ7RTU9 1775 aa22.8■■□□□ 1.24
PCCB-201ENST00000251654 MARF1Q9Y4F3 1742 aaKnown RBP22.8■■□□□ 1.24
PCCB-201ENST00000251654 U2SURPO15042 1029 aaKnown RBP22.78■■□□□ 1.24
PCCB-201ENST00000251654 PPM1GO15355 546 aaPredicted RBP22.78■■□□□ 1.24
PCCB-201ENST00000251654 GOLGA2Q08379 1002 aa22.78■■□□□ 1.24
PCCB-201ENST00000251654 TCP11L2Q8N4U5 519 aa22.78■■□□□ 1.24
PCCB-201ENST00000251654 IRX6P78412 446 aaPredicted RBP22.78■■□□□ 1.24
PCCB-201ENST00000251654 RRS1Q15050 365 aaKnown RBP22.78■■□□□ 1.24
PCCB-201ENST00000251654 PHF8Q9UPP1 1060 aa22.78■■□□□ 1.24
PCCB-201ENST00000251654 PROSER2Q86WR7 435 aaPredicted RBP22.77■■□□□ 1.24
PCCB-201ENST00000251654 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.24
PCCB-201ENST00000251654 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
PCCB-201ENST00000251654 LRRC7Q96NW7 1537 aa22.77■■□□□ 1.24
PCCB-201ENST00000251654 PEAK1Q9H792 1746 aa22.77■■□□□ 1.24
PCCB-201ENST00000251654 DUSP27Q5VZP5 1158 aa22.76■■□□□ 1.23
PCCB-201ENST00000251654 C14orf37Q86TY3 774 aa22.76■■□□□ 1.23
PCCB-201ENST00000251654 WWC1Q8IX03 1113 aa22.75■■□□□ 1.23
PCCB-201ENST00000251654 SLFN5Q08AF3 891 aa22.74■■□□□ 1.23
PCCB-201ENST00000251654 NCBP3Q53F19 620 aaKnown RBP22.74■■□□□ 1.23
PCCB-201ENST00000251654 TRMT2AQ8IZ69 625 aaKnown RBP22.74■■□□□ 1.23
PCCB-201ENST00000251654 RCAN3Q9UKA8 241 aa22.74■■□□□ 1.23
PCCB-201ENST00000251654 DMRT2Q9Y5R5 561 aa22.73■■□□□ 1.23
PCCB-201ENST00000251654 IL13P35225 146 aa22.73■■□□□ 1.23
PCCB-201ENST00000251654 SPINK5Q9NQ38 1064 aaPredicted RBP22.73■■□□□ 1.23
PCCB-201ENST00000251654 RRP7AQ9Y3A4 280 aaKnown RBP22.73■■□□□ 1.23
PCCB-201ENST00000251654 TMEM94Q12767 1356 aa22.71■■□□□ 1.23
PCCB-201ENST00000251654 CCDC27Q2M243 656 aa22.71■■□□□ 1.23
PCCB-201ENST00000251654 ESCO1Q5FWF5 840 aa22.71■■□□□ 1.23
PCCB-201ENST00000251654 ERICH6BQ5W0A0 696 aa22.71■■□□□ 1.23
PCCB-201ENST00000251654 NCOA3Q9Y6Q9 1424 aa22.71■■□□□ 1.23
PCCB-201ENST00000251654 C19orf44Q9H6X5 657 aa22.71■■□□□ 1.23
PCCB-201ENST00000251654 NEUROD2Q15784 382 aa22.7■■□□□ 1.22
PCCB-201ENST00000251654 KIF1AQ12756 1690 aa22.69■■□□□ 1.22
PCCB-201ENST00000251654 FCHSD2O94868 740 aa22.69■■□□□ 1.22
PCCB-201ENST00000251654 RSPH6AQ9H0K4 717 aa22.69■■□□□ 1.22
PCCB-201ENST00000251654 DCCP43146 1447 aa22.69■■□□□ 1.22
PCCB-201ENST00000251654 E9PSI1 815 aa22.68■■□□□ 1.22
PCCB-201ENST00000251654 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
PCCB-201ENST00000251654 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
PCCB-201ENST00000251654 RGPD1P0DJD0 1748 aa22.67■■□□□ 1.22
PCCB-201ENST00000251654 ORAI2Q96SN7 254 aa22.67■■□□□ 1.22
PCCB-201ENST00000251654 MAPK8IP3Q9UPT6 1336 aa22.67■■□□□ 1.22
PCCB-201ENST00000251654 NLRP6P59044 892 aa22.66■■□□□ 1.22
PCCB-201ENST00000251654 PNNQ9H307 717 aaKnown RBP22.66■■□□□ 1.22
PCCB-201ENST00000251654 MAP3K19Q56UN5 1328 aa22.66■■□□□ 1.22
PCCB-201ENST00000251654 RRP1P56182 461 aaKnown RBP22.66■■□□□ 1.22
PCCB-201ENST00000251654 MST1RQ04912 1400 aa22.65■■□□□ 1.22
PCCB-201ENST00000251654 TMPOP42166 694 aaKnown RBP22.65■■□□□ 1.22
PCCB-201ENST00000251654 ABTB2Q8N961 1025 aa22.65■■□□□ 1.22
PCCB-201ENST00000251654 TRPM3Q9HCF6 1732 aaPredicted RBP22.65■■□□□ 1.22
PCCB-201ENST00000251654 SOX12O15370 315 aa22.64■■□□□ 1.22
PCCB-201ENST00000251654 WDR63Q8IWG1 891 aa22.64■■□□□ 1.22
PCCB-201ENST00000251654 PAK3O75914 559 aaPredicted RBP22.64■■□□□ 1.21
PCCB-201ENST00000251654 PRKAR2BP31323 418 aa22.64■■□□□ 1.21
PCCB-201ENST00000251654 SBNO1A3KN83 1393 aa22.63■■□□□ 1.21
PCCB-201ENST00000251654 EIF4A2Q14240 407 aaKnown RBP22.63■■□□□ 1.21
PCCB-201ENST00000251654 FLT4P35916 1363 aa22.63■■□□□ 1.21
PCCB-201ENST00000251654 HMOX1P09601 288 aa22.62■■□□□ 1.21
PCCB-201ENST00000251654 PSME1Q06323 249 aa22.62■■□□□ 1.21
PCCB-201ENST00000251654 HSP90AB2PQ58FF8 381 aa22.62■■□□□ 1.21
PCCB-201ENST00000251654 NUTM2GQ5VZR2 741 aa22.62■■□□□ 1.21
PCCB-201ENST00000251654 TRIM35Q9UPQ4 493 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms