RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 TEFQ10587 303 aa16.86■□□□□ 0.29
NCLN-201ENST00000246117 C14orf93Q9H972 538 aaKnown RBP16.86■□□□□ 0.29
NCLN-201ENST00000246117 IL1RAPL2Q9NP60 686 aa16.86■□□□□ 0.29
NCLN-201ENST00000246117 FYB1O15117 783 aa16.86■□□□□ 0.29
NCLN-201ENST00000246117 CDC45O75419 566 aa16.85■□□□□ 0.29
NCLN-201ENST00000246117 XPCQ01831 940 aaPredicted RBP16.85■□□□□ 0.29
NCLN-201ENST00000246117 TSPYL6Q8N831 410 aa16.84■□□□□ 0.29
NCLN-201ENST00000246117 DRC7Q8IY82 874 aa16.84■□□□□ 0.29
NCLN-201ENST00000246117 PRPF40AO75400 957 aaKnown RBP16.83■□□□□ 0.29
NCLN-201ENST00000246117 FANCAO15360 1455 aa16.83■□□□□ 0.29
NCLN-201ENST00000246117 FOSBP53539 338 aa16.83■□□□□ 0.28
NCLN-201ENST00000246117 NUDT16Q96DE0 195 aaKnown RBP16.83■□□□□ 0.28
NCLN-201ENST00000246117 CEBPAP49715 358 aaPredicted RBP16.83■□□□□ 0.28
NCLN-201ENST00000246117 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.28
NCLN-201ENST00000246117 PHACTR3Q96KR7 559 aa16.82■□□□□ 0.28
NCLN-201ENST00000246117 LARP6Q9BRS8 491 aaKnown RBP16.82■□□□□ 0.28
NCLN-201ENST00000246117 SLC52A1Q9NWF4 448 aa16.82■□□□□ 0.28
NCLN-201ENST00000246117 C9orf78Q9NZ63 289 aaPredicted RBP16.82■□□□□ 0.28
NCLN-201ENST00000246117 SURF6O75683 361 aaKnown RBP16.82■□□□□ 0.28
NCLN-201ENST00000246117 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
NCLN-201ENST00000246117 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
NCLN-201ENST00000246117 INTS3Q68E01 1043 aaKnown RBP16.81■□□□□ 0.28
NCLN-201ENST00000246117 FCHSD2O94868 740 aa16.81■□□□□ 0.28
NCLN-201ENST00000246117 REC8O95072 547 aa16.81■□□□□ 0.28
NCLN-201ENST00000246117 CCDC27Q2M243 656 aa16.81■□□□□ 0.28
NCLN-201ENST00000246117 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
NCLN-201ENST00000246117 PANK2Q9BZ23 570 aa16.81■□□□□ 0.28
NCLN-201ENST00000246117 ABTB2Q8N961 1025 aa16.8■□□□□ 0.28
NCLN-201ENST00000246117 RTEL1-TNFRSF6BF6WH68 1400 aa16.8■□□□□ 0.28
NCLN-201ENST00000246117 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
NCLN-201ENST00000246117 C16orf71Q8IYS4 520 aaPredicted RBP16.8■□□□□ 0.28
NCLN-201ENST00000246117 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
NCLN-201ENST00000246117 ZRSR1Q15695 479 aaKnown RBP16.8■□□□□ 0.28
NCLN-201ENST00000246117 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
NCLN-201ENST00000246117 COL17A1Q9UMD9 1497 aaPredicted RBP16.79■□□□□ 0.28
NCLN-201ENST00000246117 PLCH2O75038 1416 aa16.78■□□□□ 0.28
NCLN-201ENST00000246117 UHRF1BP1Q6BDS2 1440 aa16.78■□□□□ 0.28
NCLN-201ENST00000246117 TBC1D32Q96NH3 1257 aa16.78■□□□□ 0.28
NCLN-201ENST00000246117 VPS37CA5D8V6 355 aaPredicted RBP16.78■□□□□ 0.28
NCLN-201ENST00000246117 DTNBO60941 627 aa16.78■□□□□ 0.28
NCLN-201ENST00000246117 CCDC61Q9Y6R9 512 aa16.78■□□□□ 0.28
NCLN-201ENST00000246117 MBIPQ9NS73 344 aa16.77■□□□□ 0.28
NCLN-201ENST00000246117 ASXL1Q8IXJ9 1541 aa16.77■□□□□ 0.28
NCLN-201ENST00000246117 HSP90B1P14625 803 aaKnown RBP16.77■□□□□ 0.28
NCLN-201ENST00000246117 PSME1Q06323 249 aa16.77■□□□□ 0.28
NCLN-201ENST00000246117 KDM2BQ8NHM5 1336 aa16.77■□□□□ 0.27
NCLN-201ENST00000246117 SSFA2P28290 1259 aa16.77■□□□□ 0.27
NCLN-201ENST00000246117 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.27
NCLN-201ENST00000246117 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.27
NCLN-201ENST00000246117 UBTFL1P0CB47 393 aaPredicted RBP16.76■□□□□ 0.27
NCLN-201ENST00000246117 KDM5BQ9UGL1 1544 aa16.76■□□□□ 0.27
NCLN-201ENST00000246117 ATAD2Q6PL18 1390 aa16.76■□□□□ 0.27
NCLN-201ENST00000246117 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
NCLN-201ENST00000246117 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
NCLN-201ENST00000246117 FBXW7Q969H0 707 aa16.75■□□□□ 0.27
NCLN-201ENST00000246117 GCC1Q96CN9 775 aa16.75■□□□□ 0.27
NCLN-201ENST00000246117 ANXA1P04083 346 aa16.75■□□□□ 0.27
NCLN-201ENST00000246117 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
NCLN-201ENST00000246117 K7ELQ4 463 aaPredicted RBP16.75■□□□□ 0.27
NCLN-201ENST00000246117 TBC1D9Q6ZT07 1266 aa16.74■□□□□ 0.27
NCLN-201ENST00000246117 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
NCLN-201ENST00000246117 HDGFL1Q5TGJ6 251 aa16.74■□□□□ 0.27
NCLN-201ENST00000246117 MRE11P49959 708 aa16.74■□□□□ 0.27
NCLN-201ENST00000246117 AAMPQ13685 434 aa16.74■□□□□ 0.27
NCLN-201ENST00000246117 SIL1Q9H173 461 aa16.74■□□□□ 0.27
NCLN-201ENST00000246117 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
NCLN-201ENST00000246117 ITSN2Q9NZM3 1697 aa16.73■□□□□ 0.27
NCLN-201ENST00000246117 HSP90AA2PQ14568 343 aaPredicted RBP16.73■□□□□ 0.27
NCLN-201ENST00000246117 GRPEL1Q9HAV7 217 aa16.73■□□□□ 0.27
NCLN-201ENST00000246117 FAM13BQ9NYF5 915 aa16.73■□□□□ 0.27
NCLN-201ENST00000246117 C1orf141Q5JVX7 400 aa16.73■□□□□ 0.27
NCLN-201ENST00000246117 TNPO1Q92973 898 aaKnown RBP16.73■□□□□ 0.27
NCLN-201ENST00000246117 TARBP1Q13395 1621 aaKnown RBP16.72■□□□□ 0.27
NCLN-201ENST00000246117 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
NCLN-201ENST00000246117 GDPD2Q9HCC8 539 aa16.72■□□□□ 0.27
NCLN-201ENST00000246117 POLKQ9UBT6 870 aa16.72■□□□□ 0.27
NCLN-201ENST00000246117 RPGRIP1LQ68CZ1 1315 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 FOXO3O43524 673 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 RSPH6AQ9H0K4 717 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 KDM4AO75164 1064 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
NCLN-201ENST00000246117 SKOR2Q2VWA4 1001 aaPredicted RBP16.71■□□□□ 0.27
NCLN-201ENST00000246117 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 MEIS3Q99687 375 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 ADGRL2O95490 1459 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 PBRM1Q86U86 1689 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 CEP170Q5SW79 1584 aa16.71■□□□□ 0.27
NCLN-201ENST00000246117 MBD5Q9P267 1494 aa16.71■□□□□ 0.26
NCLN-201ENST00000246117 FIBPO43427 364 aa16.7■□□□□ 0.26
NCLN-201ENST00000246117 KIAA2012Q0VF49 1180 aa16.7■□□□□ 0.26
NCLN-201ENST00000246117 ABCC10Q5T3U5 1492 aa16.7■□□□□ 0.26
NCLN-201ENST00000246117 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
NCLN-201ENST00000246117 ESCO1Q5FWF5 840 aa16.7■□□□□ 0.26
NCLN-201ENST00000246117 FAM43AQ8N2R8 423 aa16.7■□□□□ 0.26
NCLN-201ENST00000246117 ARHGEF12Q9NZN5 1544 aa16.7■□□□□ 0.26
NCLN-201ENST00000246117 GNAI2P04899 355 aa16.69■□□□□ 0.26
NCLN-201ENST00000246117 NUCB2P80303 420 aa16.69■□□□□ 0.26
NCLN-201ENST00000246117 OTUD7AQ8TE49 926 aaPredicted RBP16.69■□□□□ 0.26
NCLN-201ENST00000246117 NLRP2Q9NX02 1062 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms