RNA–Protein interactions for RNA: ENST00000245923.8

RTN2-201, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 2,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-201ENST00000245923 FRAT1Q92837 279 aaPredicted RBP33.93■■■■□ 3.02
RTN2-201ENST00000245923 TMPOP42166 694 aaKnown RBP33.91■■■■□ 3.02
RTN2-201ENST00000245923 C8orf34Q49A92 452 aa33.91■■■■□ 3.02
RTN2-201ENST00000245923 CT47B1P0C2W7 299 aaPredicted RBP33.91■■■■□ 3.02
RTN2-201ENST00000245923 MLECQ14165 292 aa33.91■■■■□ 3.02
RTN2-201ENST00000245923 WAPLQ7Z5K2 1190 aa33.91■■■■□ 3.02
RTN2-201ENST00000245923 CDC42BPGQ6DT37 1551 aa33.9■■■■□ 3.02
RTN2-201ENST00000245923 DIAPH1O60610 1272 aaKnown RBP33.88■■■■□ 3.01
RTN2-201ENST00000245923 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.87■■■■□ 3.01
RTN2-201ENST00000245923 DDRGK1Q96HY6 314 aa33.87■■■■□ 3.01
RTN2-201ENST00000245923 TRIM35Q9UPQ4 493 aa33.87■■■■□ 3.01
RTN2-201ENST00000245923 MAPK8IP3Q9UPT6 1336 aa33.87■■■■□ 3.01
RTN2-201ENST00000245923 RGS3P49796 1198 aa33.86■■■■□ 3.01
RTN2-201ENST00000245923 KNDC1Q76NI1 1749 aa33.86■■■■□ 3.01
RTN2-201ENST00000245923 VIRMAQ69YN4 1812 aaKnown RBP33.85■■■■□ 3.01
RTN2-201ENST00000245923 IL16Q14005 1332 aa33.85■■■■□ 3.01
RTN2-201ENST00000245923 ZMYM3Q14202 1370 aa33.85■■■■□ 3.01
RTN2-201ENST00000245923 RLBP1P12271 317 aa33.84■■■■□ 3.01
RTN2-201ENST00000245923 PNNQ9H307 717 aaKnown RBP33.84■■■■□ 3.01
RTN2-201ENST00000245923 NBR1Q14596 966 aa33.83■■■■□ 3.01
RTN2-201ENST00000245923 BCL2L13Q9BXK5 485 aa33.83■■■■□ 3.01
RTN2-201ENST00000245923 CPSF1Q10570 1443 aaKnown RBP33.81■■■■□ 3
RTN2-201ENST00000245923 TNNQ9UQP3 1299 aa33.81■■■■□ 3
RTN2-201ENST00000245923 METP08581 1390 aa33.81■■■■□ 3
RTN2-201ENST00000245923 PMFBP1Q8TBY8 1022 aa33.8■■■■□ 3
RTN2-201ENST00000245923 MAP2P11137 1827 aaKnown RBP33.8■■■■□ 3
RTN2-201ENST00000245923 TSR2Q969E8 191 aaKnown RBP33.79■■■■□ 3
RTN2-201ENST00000245923 WASLO00401 505 aaPredicted RBP33.78■■■■□ 3
RTN2-201ENST00000245923 EDC4Q6P2E9 1401 aaKnown RBP33.78■■■■□ 3
RTN2-201ENST00000245923 TECPR2O15040 1411 aa33.78■■■■□ 3
RTN2-201ENST00000245923 FAM135BQ49AJ0 1406 aa33.77■■■■□ 3
RTN2-201ENST00000245923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.77■■■■□ 3
RTN2-201ENST00000245923 SIRT1Q96EB6 747 aa33.77■■■■□ 3
RTN2-201ENST00000245923 ESF1Q9H501 851 aaKnown RBP33.77■■■■□ 3
RTN2-201ENST00000245923 LRRC7Q96NW7 1537 aa33.77■■■■□ 3
RTN2-201ENST00000245923 FCHSD2O94868 740 aa33.77■■■■□ 3
RTN2-201ENST00000245923 POLKQ9UBT6 870 aa33.77■■■■□ 3
RTN2-201ENST00000245923 RIPK4P57078 832 aa33.76■■■□□ 2.99
RTN2-201ENST00000245923 EXOSC9Q06265 439 aaKnown RBP33.76■■■□□ 2.99
RTN2-201ENST00000245923 ZKSCAN2Q63HK3 967 aa33.76■■■□□ 2.99
RTN2-201ENST00000245923 PPIP5K1Q6PFW1 1433 aa33.75■■■□□ 2.99
RTN2-201ENST00000245923 PCDHB15Q9Y5E8 787 aa33.75■■■□□ 2.99
RTN2-201ENST00000245923 CPS1P31327 1500 aa33.74■■■□□ 2.99
RTN2-201ENST00000245923 HDGFP51858 240 aaKnown RBP33.73■■■□□ 2.99
RTN2-201ENST00000245923 MVPQ14764 893 aaKnown RBP33.73■■■□□ 2.99
RTN2-201ENST00000245923 MON2Q7Z3U7 1717 aa33.73■■■□□ 2.99
RTN2-201ENST00000245923 TNRQ92752 1358 aa33.71■■■□□ 2.99
RTN2-201ENST00000245923 UBR1Q8IWV7 1749 aa33.71■■■□□ 2.99
RTN2-201ENST00000245923 RSPH6AQ9H0K4 717 aa33.7■■■□□ 2.99
RTN2-201ENST00000245923 DZIP1LQ8IYY4 767 aaKnown RBP33.69■■■□□ 2.98
RTN2-201ENST00000245923 TXNDC2Q86VQ3 553 aa33.69■■■□□ 2.98
RTN2-201ENST00000245923 SMC4Q9NTJ3 1288 aa33.69■■■□□ 2.98
RTN2-201ENST00000245923 AKAP12Q02952 1782 aa33.69■■■□□ 2.98
RTN2-201ENST00000245923 SSH1Q8WYL5 1049 aa33.67■■■□□ 2.98
RTN2-201ENST00000245923 CDK12Q9NYV4 1490 aaPredicted RBP33.66■■■□□ 2.98
RTN2-201ENST00000245923 NUDT16Q96DE0 195 aaKnown RBP33.66■■■□□ 2.98
RTN2-201ENST00000245923 AATKQ6ZMQ8 1374 aa33.66■■■□□ 2.98
RTN2-201ENST00000245923 FBLN1P23142 703 aa33.65■■■□□ 2.98
RTN2-201ENST00000245923 FTSJ3Q8IY81 847 aaKnown RBP33.65■■■□□ 2.98
RTN2-201ENST00000245923 RWDD1Q9H446 243 aaPredicted RBP33.65■■■□□ 2.98
RTN2-201ENST00000245923 TMEM2Q9UHN6 1383 aa33.65■■■□□ 2.98
RTN2-201ENST00000245923 ITSN1Q15811 1721 aa33.65■■■□□ 2.98
RTN2-201ENST00000245923 PRKAR2BP31323 418 aa33.64■■■□□ 2.98
RTN2-201ENST00000245923 RTL5Q5HYW3 569 aaPredicted RBP33.64■■■□□ 2.98
RTN2-201ENST00000245923 CCDC61Q9Y6R9 512 aa33.64■■■□□ 2.98
RTN2-201ENST00000245923 PPM1GO15355 546 aaPredicted RBP33.63■■■□□ 2.97
RTN2-201ENST00000245923 C3P01024 1663 aa33.63■■■□□ 2.97
RTN2-201ENST00000245923 TRIM27P14373 513 aa33.62■■■□□ 2.97
RTN2-201ENST00000245923 NME9Q86XW9 330 aa33.62■■■□□ 2.97
RTN2-201ENST00000245923 NEFMP07197 916 aa33.61■■■□□ 2.97
RTN2-201ENST00000245923 DEKP35659 375 aaKnown RBP33.61■■■□□ 2.97
RTN2-201ENST00000245923 ATF7IPQ6VMQ6 1270 aa33.6■■■□□ 2.97
RTN2-201ENST00000245923 IL13P35225 146 aa33.59■■■□□ 2.97
RTN2-201ENST00000245923 EMILIN1Q9Y6C2 1016 aa33.59■■■□□ 2.97
RTN2-201ENST00000245923 LAS1LQ9Y4W2 734 aaKnown RBP33.59■■■□□ 2.97
RTN2-201ENST00000245923 NFE2L2Q16236 605 aa33.58■■■□□ 2.97
RTN2-201ENST00000245923 PDZRN3Q9UPQ7 1066 aa33.58■■■□□ 2.97
RTN2-201ENST00000245923 ADAMTS13Q76LX8 1427 aa33.57■■■□□ 2.96
RTN2-201ENST00000245923 ALDH1L2Q3SY69 923 aa33.56■■■□□ 2.96
RTN2-201ENST00000245923 KIF16BQ96L93 1317 aa33.56■■■□□ 2.96
RTN2-201ENST00000245923 USP35Q9P2H5 1018 aa33.56■■■□□ 2.96
RTN2-201ENST00000245923 DDX19BQ9UMR2 479 aa33.56■■■□□ 2.96
RTN2-201ENST00000245923 ZRANB1Q9UGI0 708 aa33.55■■■□□ 2.96
RTN2-201ENST00000245923 NOB1Q9ULX3 412 aaKnown RBP33.55■■■□□ 2.96
RTN2-201ENST00000245923 COG3Q96JB2 828 aa33.55■■■□□ 2.96
RTN2-201ENST00000245923 NCKAP5LQ9HCH0 1330 aa33.54■■■□□ 2.96
RTN2-201ENST00000245923 PHACTR3Q96KR7 559 aa33.54■■■□□ 2.96
RTN2-201ENST00000245923 ZNF692Q9BU19 519 aaPredicted RBP33.54■■■□□ 2.96
RTN2-201ENST00000245923 USP19O94966 1318 aa33.54■■■□□ 2.96
RTN2-201ENST00000245923 ZNF428Q96B54 188 aa33.54■■■□□ 2.96
RTN2-201ENST00000245923 ROBO2Q9HCK4 1378 aa33.54■■■□□ 2.96
RTN2-201ENST00000245923 PRR36Q9H6K5 1346 aa33.53■■■□□ 2.96
RTN2-201ENST00000245923 HMOX1P09601 288 aa33.53■■■□□ 2.96
RTN2-201ENST00000245923 IPO8O15397 1037 aaKnown RBP33.51■■■□□ 2.96
RTN2-201ENST00000245923 CALD1Q05682 793 aaKnown RBP33.51■■■□□ 2.96
RTN2-201ENST00000245923 DAXXQ9UER7 740 aaPredicted RBP33.51■■■□□ 2.96
RTN2-201ENST00000245923 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.51■■■□□ 2.95
RTN2-201ENST00000245923 BRPF1P55201 1214 aaPredicted RBP33.5■■■□□ 2.95
RTN2-201ENST00000245923 HDAC1Q13547 482 aaPredicted RBP33.5■■■□□ 2.95
RTN2-201ENST00000245923 TOPAZ1Q8N9V7 1692 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms