RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TMEM57Q8N5G2 664 aa19.53■□□□□ 0.72
DDX55-201ENST00000238146 RBM25P49756 843 aaKnown RBP19.52■□□□□ 0.72
DDX55-201ENST00000238146 EVC2Q86UK5 1308 aa19.52■□□□□ 0.72
DDX55-201ENST00000238146 PPLO60437 1756 aa19.51■□□□□ 0.71
DDX55-201ENST00000238146 U2SURPO15042 1029 aaKnown RBP19.51■□□□□ 0.71
DDX55-201ENST00000238146 SNX21Q969T3 373 aa19.5■□□□□ 0.71
DDX55-201ENST00000238146 PNNQ9H307 717 aaKnown RBP19.5■□□□□ 0.71
DDX55-201ENST00000238146 GRPEL1Q9HAV7 217 aa19.5■□□□□ 0.71
DDX55-201ENST00000238146 TULP4Q9NRJ4 1543 aa19.5■□□□□ 0.71
DDX55-201ENST00000238146 NUCB1Q02818 461 aa19.49■□□□□ 0.71
DDX55-201ENST00000238146 CABP2Q9NPB3 220 aa19.49■□□□□ 0.71
DDX55-201ENST00000238146 NPATQ14207 1427 aa19.49■□□□□ 0.71
DDX55-201ENST00000238146 IL16Q14005 1332 aa19.49■□□□□ 0.71
DDX55-201ENST00000238146 RPGRIP1LQ68CZ1 1315 aa19.48■□□□□ 0.71
DDX55-201ENST00000238146 ABCC11Q96J66 1382 aa19.48■□□□□ 0.71
DDX55-201ENST00000238146 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
DDX55-201ENST00000238146 KIDINS220Q9ULH0 1771 aa19.47■□□□□ 0.71
DDX55-201ENST00000238146 ISY1Q9ULR0 285 aaKnown RBP19.47■□□□□ 0.71
DDX55-201ENST00000238146 TNPO1Q92973 898 aaKnown RBP19.47■□□□□ 0.71
DDX55-201ENST00000238146 NAP1L5Q96NT1 182 aaPredicted RBP19.46■□□□□ 0.71
DDX55-201ENST00000238146 KIF16BQ96L93 1317 aa19.46■□□□□ 0.71
DDX55-201ENST00000238146 COL3A1P02461 1466 aaPredicted RBP19.46■□□□□ 0.7
DDX55-201ENST00000238146 IPO8O15397 1037 aaKnown RBP19.45■□□□□ 0.7
DDX55-201ENST00000238146 RIPK4P57078 832 aa19.45■□□□□ 0.7
DDX55-201ENST00000238146 CHD1LQ86WJ1 897 aa19.45■□□□□ 0.7
DDX55-201ENST00000238146 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
DDX55-201ENST00000238146 GLI2P10070 1586 aa19.45■□□□□ 0.7
DDX55-201ENST00000238146 CFAP65Q6ZU64 1925 aaKnown RBP19.45■□□□□ 0.7
DDX55-201ENST00000238146 CIZ1Q9ULV3 898 aaPredicted RBP19.45■□□□□ 0.7
DDX55-201ENST00000238146 A0A1W2PP64 1363 aa19.44■□□□□ 0.7
DDX55-201ENST00000238146 NUTM2DQ5VT03 806 aaPredicted RBP19.43■□□□□ 0.7
DDX55-201ENST00000238146 KIF2CQ99661 725 aa19.43■□□□□ 0.7
DDX55-201ENST00000238146 HSP90AB1P08238 724 aaKnown RBP19.42■□□□□ 0.7
DDX55-201ENST00000238146 RAB3GAP1Q15042 981 aa19.42■□□□□ 0.7
DDX55-201ENST00000238146 BMP2KLQ5H9B9 411 aa19.42■□□□□ 0.7
DDX55-201ENST00000238146 ARHGEF28Q8N1W1 1705 aaKnown RBP19.42■□□□□ 0.7
DDX55-201ENST00000238146 SAFB2Q14151 953 aaKnown RBP eCLIP19.42■□□□□ 0.7
DDX55-201ENST00000238146 GAS2L3Q86XJ1 694 aa19.42■□□□□ 0.7
DDX55-201ENST00000238146 ALDH1L2Q3SY69 923 aa19.41■□□□□ 0.7
DDX55-201ENST00000238146 GGT6Q6P531 493 aa19.41■□□□□ 0.7
DDX55-201ENST00000238146 ESPNB1AK53 854 aa19.41■□□□□ 0.7
DDX55-201ENST00000238146 GBP4Q96PP9 640 aa19.41■□□□□ 0.7
DDX55-201ENST00000238146 ERBB4Q15303 1308 aa19.4■□□□□ 0.7
DDX55-201ENST00000238146 FYB1O15117 783 aa19.39■□□□□ 0.7
DDX55-201ENST00000238146 CD2BP2O95400 341 aaKnown RBP19.39■□□□□ 0.69
DDX55-201ENST00000238146 VGFO15240 615 aaPredicted RBP19.38■□□□□ 0.69
DDX55-201ENST00000238146 SRPK2P78362 688 aaKnown RBP19.38■□□□□ 0.69
DDX55-201ENST00000238146 SKOR2Q2VWA4 1001 aaPredicted RBP19.38■□□□□ 0.69
DDX55-201ENST00000238146 ANKRD45Q5TZF3 282 aa19.38■□□□□ 0.69
DDX55-201ENST00000238146 DIAPH1O60610 1272 aaKnown RBP19.37■□□□□ 0.69
DDX55-201ENST00000238146 ZBTB7BO15156 539 aaPredicted RBP19.37■□□□□ 0.69
DDX55-201ENST00000238146 PPIP5K1Q6PFW1 1433 aa19.37■□□□□ 0.69
DDX55-201ENST00000238146 BRPF1P55201 1214 aaPredicted RBP19.36■□□□□ 0.69
DDX55-201ENST00000238146 MED14O60244 1454 aa19.36■□□□□ 0.69
DDX55-201ENST00000238146 CFAP74Q9C0B2 1584 aa19.36■□□□□ 0.69
DDX55-201ENST00000238146 FOXD4L1Q9NU39 408 aa19.36■□□□□ 0.69
DDX55-201ENST00000238146 TBC1D9Q6ZT07 1266 aa19.35■□□□□ 0.69
DDX55-201ENST00000238146 GCC1Q96CN9 775 aa19.35■□□□□ 0.69
DDX55-201ENST00000238146 CAMSAP1Q5T5Y3 1602 aa19.35■□□□□ 0.69
DDX55-201ENST00000238146 K7ELQ4 463 aaPredicted RBP19.35■□□□□ 0.69
DDX55-201ENST00000238146 HSP90AA1P07900 732 aaKnown RBP19.35■□□□□ 0.69
DDX55-201ENST00000238146 PNPLA6Q8IY17 1366 aa19.35■□□□□ 0.69
DDX55-201ENST00000238146 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
DDX55-201ENST00000238146 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
DDX55-201ENST00000238146 PTMSP20962 102 aa19.34■□□□□ 0.69
DDX55-201ENST00000238146 TRIM44Q96DX7 344 aaPredicted RBP19.34■□□□□ 0.69
DDX55-201ENST00000238146 STK26Q9P289 416 aa19.34■□□□□ 0.69
DDX55-201ENST00000238146 ZNF428Q96B54 188 aa19.33■□□□□ 0.69
DDX55-201ENST00000238146 C1orf115Q9H7X2 142 aa19.33■□□□□ 0.69
DDX55-201ENST00000238146 TERF2IPQ9NYB0 399 aa19.33■□□□□ 0.69
DDX55-201ENST00000238146 NEXMIFQ5QGS0 1516 aa19.33■□□□□ 0.69
DDX55-201ENST00000238146 FCHSD2O94868 740 aa19.32■□□□□ 0.68
DDX55-201ENST00000238146 ABCC3O15438 1527 aa19.32■□□□□ 0.68
DDX55-201ENST00000238146 ASXL2Q76L83 1435 aa19.32■□□□□ 0.68
DDX55-201ENST00000238146 HECW2Q9P2P5 1572 aa19.32■□□□□ 0.68
DDX55-201ENST00000238146 CD163L1Q9NR16 1453 aa19.31■□□□□ 0.68
DDX55-201ENST00000238146 SIRT2Q8IXJ6 389 aa19.31■□□□□ 0.68
DDX55-201ENST00000238146 GAS2L2Q8NHY3 880 aa19.31■□□□□ 0.68
DDX55-201ENST00000238146 SSFA2P28290 1259 aa19.31■□□□□ 0.68
DDX55-201ENST00000238146 ATAD2Q6PL18 1390 aa19.31■□□□□ 0.68
DDX55-201ENST00000238146 VAMP4O75379 141 aa19.3■□□□□ 0.68
DDX55-201ENST00000238146 MRPL50Q8N5N7 158 aaKnown RBP19.3■□□□□ 0.68
DDX55-201ENST00000238146 PIK3R4Q99570 1358 aa19.3■□□□□ 0.68
DDX55-201ENST00000238146 ARHGAP45Q92619 1136 aa19.3■□□□□ 0.68
DDX55-201ENST00000238146 CHMP4BQ9H444 224 aaKnown RBP19.3■□□□□ 0.68
DDX55-201ENST00000238146 PRKAR2BP31323 418 aa19.29■□□□□ 0.68
DDX55-201ENST00000238146 CLEC17AQ6ZS10 378 aa19.29■□□□□ 0.68
DDX55-201ENST00000238146 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
DDX55-201ENST00000238146 ANKRD26Q9UPS8 1709 aa19.29■□□□□ 0.68
DDX55-201ENST00000238146 MINK1Q8N4C8 1332 aaPredicted RBP19.29■□□□□ 0.68
DDX55-201ENST00000238146 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
DDX55-201ENST00000238146 HSP90AA2PQ14568 343 aaPredicted RBP19.28■□□□□ 0.68
DDX55-201ENST00000238146 SIGLEC1Q9BZZ2 1709 aa19.28■□□□□ 0.68
DDX55-201ENST00000238146 LRRC7Q96NW7 1537 aa19.28■□□□□ 0.68
DDX55-201ENST00000238146 PTCH1Q13635 1447 aa19.28■□□□□ 0.68
DDX55-201ENST00000238146 RRP9O43818 475 aaKnown RBP19.28■□□□□ 0.68
DDX55-201ENST00000238146 TSPYL6Q8N831 410 aa19.28■□□□□ 0.68
DDX55-201ENST00000238146 MLH3Q9UHC1 1453 aa19.27■□□□□ 0.68
DDX55-201ENST00000238146 FAM135BQ49AJ0 1406 aa19.27■□□□□ 0.67
DDX55-201ENST00000238146 THUMPD2Q9BTF0 503 aaKnown RBP19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms