RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 MVPQ14764 893 aaKnown RBP11.69□□□□□ -0.54
SYDE2-201ENST00000234668 SOX12O15370 315 aa11.68□□□□□ -0.54
SYDE2-201ENST00000234668 SETBP1Q9Y6X0 1596 aa11.68□□□□□ -0.54
SYDE2-201ENST00000234668 NME9Q86XW9 330 aa11.68□□□□□ -0.54
SYDE2-201ENST00000234668 PMFBP1Q8TBY8 1022 aa11.68□□□□□ -0.54
SYDE2-201ENST00000234668 SHPRHQ149N8 1683 aa11.68□□□□□ -0.54
SYDE2-201ENST00000234668 NEXMIFQ5QGS0 1516 aa11.68□□□□□ -0.54
SYDE2-201ENST00000234668 RRS1Q15050 365 aaKnown RBP11.68□□□□□ -0.54
SYDE2-201ENST00000234668 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
SYDE2-201ENST00000234668 TMEM57Q8N5G2 664 aa11.68□□□□□ -0.54
SYDE2-201ENST00000234668 RWDD1Q9H446 243 aaPredicted RBP11.67□□□□□ -0.54
SYDE2-201ENST00000234668 NEURL4Q96JN8 1562 aa11.67□□□□□ -0.54
SYDE2-201ENST00000234668 CAMSAP1Q5T5Y3 1602 aa11.67□□□□□ -0.54
SYDE2-201ENST00000234668 C1orf115Q9H7X2 142 aa11.67□□□□□ -0.54
SYDE2-201ENST00000234668 POLKQ9UBT6 870 aa11.67□□□□□ -0.54
SYDE2-201ENST00000234668 YTHDC2Q9H6S0 1430 aaKnown RBP11.66□□□□□ -0.54
SYDE2-201ENST00000234668 ABCC11Q96J66 1382 aa11.66□□□□□ -0.54
SYDE2-201ENST00000234668 MYO3AQ8NEV4 1616 aa11.66□□□□□ -0.54
SYDE2-201ENST00000234668 IQSEC2Q5JU85 1478 aa11.66□□□□□ -0.54
SYDE2-201ENST00000234668 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
SYDE2-201ENST00000234668 TSPYL6Q8N831 410 aa11.65□□□□□ -0.54
SYDE2-201ENST00000234668 DIP2CQ9Y2E4 1556 aa11.65□□□□□ -0.54
SYDE2-201ENST00000234668 FAM83GA6ND36 823 aa11.65□□□□□ -0.54
SYDE2-201ENST00000234668 MFAP1P55081 439 aaKnown RBP11.65□□□□□ -0.55
SYDE2-201ENST00000234668 ATF7IPQ6VMQ6 1270 aa11.65□□□□□ -0.55
SYDE2-201ENST00000234668 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
SYDE2-201ENST00000234668 ARXQ96QS3 562 aa11.64□□□□□ -0.55
SYDE2-201ENST00000234668 LNPKQ9C0E8 428 aa11.63□□□□□ -0.55
SYDE2-201ENST00000234668 PUS7Q96PZ0 661 aaKnown RBP11.63□□□□□ -0.55
SYDE2-201ENST00000234668 USP35Q9P2H5 1018 aa11.63□□□□□ -0.55
SYDE2-201ENST00000234668 BRPF3Q9ULD4 1205 aa11.63□□□□□ -0.55
SYDE2-201ENST00000234668 MYO5BQ9ULV0 1848 aa11.63□□□□□ -0.55
SYDE2-201ENST00000234668 NEO1Q92859 1461 aa11.63□□□□□ -0.55
SYDE2-201ENST00000234668 ATAD2Q6PL18 1390 aa11.62□□□□□ -0.55
SYDE2-201ENST00000234668 ARHGEF28Q8N1W1 1705 aaKnown RBP11.62□□□□□ -0.55
SYDE2-201ENST00000234668 PTPRMP28827 1452 aa11.62□□□□□ -0.55
SYDE2-201ENST00000234668 CD163L1Q9NR16 1453 aa11.62□□□□□ -0.55
SYDE2-201ENST00000234668 GSE1Q14687 1217 aa11.62□□□□□ -0.55
SYDE2-201ENST00000234668 NSD2O96028 1365 aa11.62□□□□□ -0.55
SYDE2-201ENST00000234668 ZC3H13Q5T200 1668 aaKnown RBP11.61□□□□□ -0.55
SYDE2-201ENST00000234668 RSPH6AQ9H0K4 717 aa11.61□□□□□ -0.55
SYDE2-201ENST00000234668 ESF1Q9H501 851 aaKnown RBP11.6□□□□□ -0.55
SYDE2-201ENST00000234668 KRT24Q2M2I5 525 aa11.6□□□□□ -0.55
SYDE2-201ENST00000234668 NUDT16Q96DE0 195 aaKnown RBP11.6□□□□□ -0.55
SYDE2-201ENST00000234668 UPF2Q9HAU5 1272 aaKnown RBP11.6□□□□□ -0.55
SYDE2-201ENST00000234668 NINLQ9Y2I6 1382 aa11.6□□□□□ -0.55
SYDE2-201ENST00000234668 FCHSD2O94868 740 aa11.6□□□□□ -0.55
SYDE2-201ENST00000234668 DDX19BQ9UMR2 479 aa11.6□□□□□ -0.55
SYDE2-201ENST00000234668 ARHGAP31Q2M1Z3 1444 aa11.59□□□□□ -0.55
SYDE2-201ENST00000234668 METP08581 1390 aa11.59□□□□□ -0.55
SYDE2-201ENST00000234668 TBC1D2Q9BYX2 928 aa11.59□□□□□ -0.55
SYDE2-201ENST00000234668 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
SYDE2-201ENST00000234668 AEBP1Q8IUX7 1158 aa11.59□□□□□ -0.55
SYDE2-201ENST00000234668 TSPOAP1O95153 1857 aa11.58□□□□□ -0.55
SYDE2-201ENST00000234668 ZBTB40Q9NUA8 1239 aa11.58□□□□□ -0.56
SYDE2-201ENST00000234668 C8orf58Q8NAV2 365 aa11.58□□□□□ -0.56
SYDE2-201ENST00000234668 TBC1D32Q96NH3 1257 aa11.58□□□□□ -0.56
SYDE2-201ENST00000234668 CFAP74Q9C0B2 1584 aa11.58□□□□□ -0.56
SYDE2-201ENST00000234668 CEBPAP49715 358 aaPredicted RBP11.57□□□□□ -0.56
SYDE2-201ENST00000234668 ANKRD45Q5TZF3 282 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 MBIPQ9NS73 344 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 NLRP1Q9C000 1473 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 VAMP4O75379 141 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 BECN1Q14457 450 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 NFE2L2Q16236 605 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 SLC26A8Q96RN1 970 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 ALKQ9UM73 1620 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 MIS18AQ9NYP9 233 aa11.57□□□□□ -0.56
SYDE2-201ENST00000234668 COL3A1P02461 1466 aaPredicted RBP11.56□□□□□ -0.56
SYDE2-201ENST00000234668 ZFYVE9O95405 1425 aa11.56□□□□□ -0.56
SYDE2-201ENST00000234668 RIMS2Q9UQ26 1411 aa11.56□□□□□ -0.56
SYDE2-201ENST00000234668 TMEM131LA2VDJ0 1609 aa11.56□□□□□ -0.56
SYDE2-201ENST00000234668 IPO8O15397 1037 aaKnown RBP11.56□□□□□ -0.56
SYDE2-201ENST00000234668 IL13P35225 146 aa11.56□□□□□ -0.56
SYDE2-201ENST00000234668 COG3Q96JB2 828 aa11.56□□□□□ -0.56
SYDE2-201ENST00000234668 ARHGEF40Q8TER5 1519 aa11.56□□□□□ -0.56
SYDE2-201ENST00000234668 APBB1O00213 710 aa11.56□□□□□ -0.56
SYDE2-201ENST00000234668 C22orf23Q9BZE7 217 aa11.56□□□□□ -0.56
SYDE2-201ENST00000234668 MCM10Q7L590 875 aa11.55□□□□□ -0.56
SYDE2-201ENST00000234668 RICTORQ6R327 1708 aa11.55□□□□□ -0.56
SYDE2-201ENST00000234668 SULT6B1Q6IMI4 303 aa11.54□□□□□ -0.56
SYDE2-201ENST00000234668 FOXD4L1Q9NU39 408 aa11.54□□□□□ -0.56
SYDE2-201ENST00000234668 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
SYDE2-201ENST00000234668 PPIP5K1Q6PFW1 1433 aa11.54□□□□□ -0.56
SYDE2-201ENST00000234668 PNPLA6Q8IY17 1366 aa11.54□□□□□ -0.56
SYDE2-201ENST00000234668 HDAC1Q13547 482 aaPredicted RBP11.54□□□□□ -0.56
SYDE2-201ENST00000234668 TWISTNBQ3B726 338 aaPredicted RBP11.54□□□□□ -0.56
SYDE2-201ENST00000234668 GZF1Q9H116 711 aaPredicted RBP11.54□□□□□ -0.56
SYDE2-201ENST00000234668 PNNQ9H307 717 aaKnown RBP11.54□□□□□ -0.56
SYDE2-201ENST00000234668 PREX1Q8TCU6 1659 aa11.54□□□□□ -0.56
SYDE2-201ENST00000234668 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
SYDE2-201ENST00000234668 CT47B1P0C2W7 299 aaPredicted RBP11.54□□□□□ -0.56
SYDE2-201ENST00000234668 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
SYDE2-201ENST00000234668 PRR36Q9H6K5 1346 aa11.53□□□□□ -0.56
SYDE2-201ENST00000234668 SMC5Q8IY18 1101 aa11.53□□□□□ -0.56
SYDE2-201ENST00000234668 ZBTB7BO15156 539 aaPredicted RBP11.53□□□□□ -0.56
SYDE2-201ENST00000234668 HSP90AB2PQ58FF8 381 aa11.53□□□□□ -0.56
SYDE2-201ENST00000234668 IL16Q14005 1332 aa11.53□□□□□ -0.56
SYDE2-201ENST00000234668 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
SYDE2-201ENST00000234668 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms