RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 RARSP54136 660 aaKnown RBP20.76■□□□□ 0.91
SLC1A4-201ENST00000234256 CCDC30Q5VVM6 783 aa20.76■□□□□ 0.91
SLC1A4-201ENST00000234256 MIS18AQ9NYP9 233 aa20.76■□□□□ 0.91
SLC1A4-201ENST00000234256 CCAR2Q8N163 923 aaKnown RBP20.76■□□□□ 0.91
SLC1A4-201ENST00000234256 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
SLC1A4-201ENST00000234256 PTPRKQ15262 1439 aa20.76■□□□□ 0.91
SLC1A4-201ENST00000234256 CPLX2Q6PUV4 134 aaKnown RBP20.75■□□□□ 0.91
SLC1A4-201ENST00000234256 WAPLQ7Z5K2 1190 aa20.75■□□□□ 0.91
SLC1A4-201ENST00000234256 ADGRF5Q8IZF2 1346 aa20.75■□□□□ 0.91
SLC1A4-201ENST00000234256 DUSP27Q5VZP5 1158 aa20.75■□□□□ 0.91
SLC1A4-201ENST00000234256 SLC52A1Q9NWF4 448 aa20.75■□□□□ 0.91
SLC1A4-201ENST00000234256 GNAI2P04899 355 aa20.74■□□□□ 0.91
SLC1A4-201ENST00000234256 GAS2L2Q8NHY3 880 aa20.74■□□□□ 0.91
SLC1A4-201ENST00000234256 FIBPO43427 364 aa20.73■□□□□ 0.91
SLC1A4-201ENST00000234256 MAP4K4O95819 1239 aaPredicted RBP20.73■□□□□ 0.91
SLC1A4-201ENST00000234256 FSD1Q9BTV5 496 aa20.73■□□□□ 0.91
SLC1A4-201ENST00000234256 RABEP1Q15276 862 aa20.73■□□□□ 0.91
SLC1A4-201ENST00000234256 ANO8Q9HCE9 1232 aaPredicted RBP20.73■□□□□ 0.91
SLC1A4-201ENST00000234256 IL1RAPL2Q9NP60 686 aa20.73■□□□□ 0.91
SLC1A4-201ENST00000234256 MCM4P33991 863 aa20.72■□□□□ 0.91
SLC1A4-201ENST00000234256 R3HCC1Q9Y3T6 440 aaKnown RBP20.72■□□□□ 0.91
SLC1A4-201ENST00000234256 KDM4AO75164 1064 aa20.72■□□□□ 0.91
SLC1A4-201ENST00000234256 AKAP17AQ02040 695 aaKnown RBP20.71■□□□□ 0.91
SLC1A4-201ENST00000234256 ESCO1Q5FWF5 840 aa20.71■□□□□ 0.91
SLC1A4-201ENST00000234256 WASHC4Q2M389 1173 aa20.71■□□□□ 0.91
SLC1A4-201ENST00000234256 EXOC6BQ9Y2D4 811 aa20.7■□□□□ 0.9
SLC1A4-201ENST00000234256 SYNE3Q6ZMZ3 975 aa20.7■□□□□ 0.9
SLC1A4-201ENST00000234256 FCHSD2O94868 740 aa20.7■□□□□ 0.9
SLC1A4-201ENST00000234256 TRDNQ13061 729 aa20.7■□□□□ 0.9
SLC1A4-201ENST00000234256 CNTROBQ8N137 903 aa20.7■□□□□ 0.9
SLC1A4-201ENST00000234256 RPRD2Q5VT52 1461 aaKnown RBP20.69■□□□□ 0.9
SLC1A4-201ENST00000234256 SIL1Q9H173 461 aa20.69■□□□□ 0.9
SLC1A4-201ENST00000234256 PDE4CQ08493 712 aa20.68■□□□□ 0.9
SLC1A4-201ENST00000234256 TPD52L1Q16890 204 aaPredicted RBP20.68■□□□□ 0.9
SLC1A4-201ENST00000234256 MCM10Q7L590 875 aa20.68■□□□□ 0.9
SLC1A4-201ENST00000234256 PTPN23Q9H3S7 1636 aa20.68■□□□□ 0.9
SLC1A4-201ENST00000234256 K7ELQ4 463 aaPredicted RBP20.68■□□□□ 0.9
SLC1A4-201ENST00000234256 CT47B1P0C2W7 299 aaPredicted RBP20.68■□□□□ 0.9
SLC1A4-201ENST00000234256 SASS6Q6UVJ0 657 aa20.68■□□□□ 0.9
SLC1A4-201ENST00000234256 FBLN1P23142 703 aa20.68■□□□□ 0.9
SLC1A4-201ENST00000234256 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
SLC1A4-201ENST00000234256 DNAJC2Q99543 621 aaKnown RBP20.67■□□□□ 0.9
SLC1A4-201ENST00000234256 LRRFIP1Q32MZ4 808 aaKnown RBP20.67■□□□□ 0.9
SLC1A4-201ENST00000234256 NFE2L2Q16236 605 aa20.66■□□□□ 0.9
SLC1A4-201ENST00000234256 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
SLC1A4-201ENST00000234256 MARCH6O60337 910 aa20.66■□□□□ 0.9
SLC1A4-201ENST00000234256 CCDC61Q9Y6R9 512 aa20.66■□□□□ 0.9
SLC1A4-201ENST00000234256 TRIM29Q14134 588 aa20.66■□□□□ 0.9
SLC1A4-201ENST00000234256 RTEL1-TNFRSF6BF6WH68 1400 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 LRRCC1Q9C099 1032 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 NFXL1Q6ZNB6 911 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 CCDC73Q6ZRK6 1079 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 SDF4Q9BRK5 362 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 IFT57Q9NWB7 429 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 FAM177BA6PVY3 158 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 TPM3P06753 285 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 CEBPZQ03701 1054 aaKnown RBP20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 EMILIN1Q9Y6C2 1016 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 PLEKHH2Q8IVE3 1493 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 IGHDP01880 384 aa20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 ZNF692Q9BU19 519 aaPredicted RBP20.65■□□□□ 0.9
SLC1A4-201ENST00000234256 SMARCA5O60264 1052 aaPredicted RBP20.64■□□□□ 0.9
SLC1A4-201ENST00000234256 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.64■□□□□ 0.9
SLC1A4-201ENST00000234256 RALYLQ86SE5 291 aaKnown RBP20.64■□□□□ 0.89
SLC1A4-201ENST00000234256 MAPKBP1O60336 1514 aa20.64■□□□□ 0.89
SLC1A4-201ENST00000234256 ZNF530Q6P9A1 599 aaPredicted RBP20.64■□□□□ 0.89
SLC1A4-201ENST00000234256 SRCIN1Q9C0H9 1055 aa20.64■□□□□ 0.89
SLC1A4-201ENST00000234256 SRGAP3O43295 1099 aa20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 NUDT16Q96DE0 195 aaKnown RBP20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 UPF3BQ9BZI7 483 aaKnown RBP20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 G3V3G9 751 aa20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 DCAF8Q5TAQ9 597 aa20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 NME9Q86XW9 330 aa20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 HOMER1Q86YM7 354 aa20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 CCDC141Q6ZP82 1450 aa20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
SLC1A4-201ENST00000234256 XPCQ01831 940 aaPredicted RBP20.62■□□□□ 0.89
SLC1A4-201ENST00000234256 MBD3O95983 291 aa20.62■□□□□ 0.89
SLC1A4-201ENST00000234256 TRIM27P14373 513 aa20.62■□□□□ 0.89
SLC1A4-201ENST00000234256 ATP2B1P20020 1258 aa20.62■□□□□ 0.89
SLC1A4-201ENST00000234256 IDI1Q13907 227 aa20.62■□□□□ 0.89
SLC1A4-201ENST00000234256 CHMP4CQ96CF2 233 aa20.62■□□□□ 0.89
SLC1A4-201ENST00000234256 STK3Q13188 491 aa20.62■□□□□ 0.89
SLC1A4-201ENST00000234256 ATF3P18847 181 aa20.61■□□□□ 0.89
SLC1A4-201ENST00000234256 CCT4P50991 539 aaKnown RBP20.61■□□□□ 0.89
SLC1A4-201ENST00000234256 GRPEL1Q9HAV7 217 aa20.61■□□□□ 0.89
SLC1A4-201ENST00000234256 VPS53Q5VIR6 699 aa20.61■□□□□ 0.89
SLC1A4-201ENST00000234256 PLEKHO1Q53GL0 409 aaPredicted RBP20.61■□□□□ 0.89
SLC1A4-201ENST00000234256 F6X3S4 739 aa20.6■□□□□ 0.89
SLC1A4-201ENST00000234256 ATAD2Q6PL18 1390 aa20.6■□□□□ 0.89
SLC1A4-201ENST00000234256 FBXO31Q5XUX0 539 aaPredicted RBP20.6■□□□□ 0.89
SLC1A4-201ENST00000234256 VPS37DQ86XT2 251 aa20.6■□□□□ 0.89
SLC1A4-201ENST00000234256 TBC1D2Q9BYX2 928 aa20.6■□□□□ 0.89
SLC1A4-201ENST00000234256 RAD21O60216 631 aa20.6■□□□□ 0.89
SLC1A4-201ENST00000234256 NOC3LQ8WTT2 800 aaKnown RBP20.6■□□□□ 0.89
SLC1A4-201ENST00000234256 NINLQ9Y2I6 1382 aa20.59■□□□□ 0.89
SLC1A4-201ENST00000234256 MYL6BP14649 208 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms