RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.96
ITGA4-201ENST00000233573 CDC42BPGQ6DT37 1551 aa21.07■□□□□ 0.96
ITGA4-201ENST00000233573 RBM33Q96EV2 1170 aaKnown RBP21.07■□□□□ 0.96
ITGA4-201ENST00000233573 SLFN5Q08AF3 891 aa21.06■□□□□ 0.96
ITGA4-201ENST00000233573 B4GALNT3Q6L9W6 998 aa21.06■□□□□ 0.96
ITGA4-201ENST00000233573 TOPAZ1Q8N9V7 1692 aa21.06■□□□□ 0.96
ITGA4-201ENST00000233573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.06■□□□□ 0.96
ITGA4-201ENST00000233573 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
ITGA4-201ENST00000233573 ITSN1Q15811 1721 aa21.04■□□□□ 0.96
ITGA4-201ENST00000233573 HSPA2P54652 639 aa21.04■□□□□ 0.96
ITGA4-201ENST00000233573 AKAP12Q02952 1782 aa21.04■□□□□ 0.96
ITGA4-201ENST00000233573 NKTRP30414 1462 aaKnown RBP21.03■□□□□ 0.96
ITGA4-201ENST00000233573 RUNDC1Q96C34 613 aa21.03■□□□□ 0.96
ITGA4-201ENST00000233573 RGPD8O14715 1765 aaPredicted RBP21.03■□□□□ 0.96
ITGA4-201ENST00000233573 EDC4Q6P2E9 1401 aaKnown RBP21.02■□□□□ 0.96
ITGA4-201ENST00000233573 NALCNQ8IZF0 1738 aa21.02■□□□□ 0.96
ITGA4-201ENST00000233573 MYT1Q01538 1121 aa21.02■□□□□ 0.96
ITGA4-201ENST00000233573 SPINK5Q9NQ38 1064 aaPredicted RBP21.02■□□□□ 0.96
ITGA4-201ENST00000233573 PNPLA6Q8IY17 1366 aa21.01■□□□□ 0.95
ITGA4-201ENST00000233573 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
ITGA4-201ENST00000233573 DMRT2Q9Y5R5 561 aa21■□□□□ 0.95
ITGA4-201ENST00000233573 WWC1Q8IX03 1113 aa20.99■□□□□ 0.95
ITGA4-201ENST00000233573 ACEP12821 1306 aa20.98■□□□□ 0.95
ITGA4-201ENST00000233573 E9PSI1 815 aa20.98■□□□□ 0.95
ITGA4-201ENST00000233573 NCBP3Q53F19 620 aaKnown RBP20.98■□□□□ 0.95
ITGA4-201ENST00000233573 NME9Q86XW9 330 aa20.98■□□□□ 0.95
ITGA4-201ENST00000233573 FMN2Q9NZ56 1722 aa20.97■□□□□ 0.95
ITGA4-201ENST00000233573 TCP11L2Q8N4U5 519 aa20.97■□□□□ 0.95
ITGA4-201ENST00000233573 ZRANB1Q9UGI0 708 aa20.97■□□□□ 0.95
ITGA4-201ENST00000233573 PMFBP1Q8TBY8 1022 aa20.97■□□□□ 0.95
ITGA4-201ENST00000233573 NWD1Q149M9 1564 aa20.96■□□□□ 0.95
ITGA4-201ENST00000233573 PLEKHG3A1L390 1219 aa20.95■□□□□ 0.94
ITGA4-201ENST00000233573 EXOC6Q8TAG9 804 aa20.95■□□□□ 0.94
ITGA4-201ENST00000233573 NRKQ7Z2Y5 1582 aa20.95■□□□□ 0.94
ITGA4-201ENST00000233573 LMTK3Q96Q04 1460 aa20.95■□□□□ 0.94
ITGA4-201ENST00000233573 FBLN1P23142 703 aa20.95■□□□□ 0.94
ITGA4-201ENST00000233573 CCDC27Q2M243 656 aa20.95■□□□□ 0.94
ITGA4-201ENST00000233573 MAP2P11137 1827 aaKnown RBP20.94■□□□□ 0.94
ITGA4-201ENST00000233573 U2AF1L5P0DN76 240 aaPredicted RBP20.94■□□□□ 0.94
ITGA4-201ENST00000233573 U2AF1Q01081 240 aaKnown RBP eCLIP20.94■□□□□ 0.94
ITGA4-201ENST00000233573 PLIN1O60240 522 aa20.93■□□□□ 0.94
ITGA4-201ENST00000233573 CCDC136Q96JN2 1154 aa20.93■□□□□ 0.94
ITGA4-201ENST00000233573 PLEKHF1Q96S99 279 aa20.93■□□□□ 0.94
ITGA4-201ENST00000233573 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
ITGA4-201ENST00000233573 POLKQ9UBT6 870 aa20.92■□□□□ 0.94
ITGA4-201ENST00000233573 USP6P35125 1406 aa20.92■□□□□ 0.94
ITGA4-201ENST00000233573 ADGRL3Q9HAR2 1447 aa20.92■□□□□ 0.94
ITGA4-201ENST00000233573 RRP7AQ9Y3A4 280 aaKnown RBP20.92■□□□□ 0.94
ITGA4-201ENST00000233573 ANKARQ7Z5J8 1434 aa20.91■□□□□ 0.94
ITGA4-201ENST00000233573 AATKQ6ZMQ8 1374 aa20.9■□□□□ 0.94
ITGA4-201ENST00000233573 STRCP1A6NGW2 1772 aa20.9■□□□□ 0.94
ITGA4-201ENST00000233573 WDR63Q8IWG1 891 aa20.9■□□□□ 0.94
ITGA4-201ENST00000233573 TTC21BQ7Z4L5 1316 aa20.9■□□□□ 0.94
ITGA4-201ENST00000233573 DIAPH1O60610 1272 aaKnown RBP20.89■□□□□ 0.93
ITGA4-201ENST00000233573 C14orf37Q86TY3 774 aa20.89■□□□□ 0.93
ITGA4-201ENST00000233573 NEUROD2Q15784 382 aa20.88■□□□□ 0.93
ITGA4-201ENST00000233573 NGDNQ8NEJ9 315 aaKnown RBP20.88■□□□□ 0.93
ITGA4-201ENST00000233573 CDK12Q9NYV4 1490 aaPredicted RBP20.87■□□□□ 0.93
ITGA4-201ENST00000233573 STRCQ7RTU9 1775 aa20.87■□□□□ 0.93
ITGA4-201ENST00000233573 U2SURPO15042 1029 aaKnown RBP20.87■□□□□ 0.93
ITGA4-201ENST00000233573 PROSER2Q86WR7 435 aaPredicted RBP20.87■□□□□ 0.93
ITGA4-201ENST00000233573 C20orf194Q5TEA3 1177 aa20.86■□□□□ 0.93
ITGA4-201ENST00000233573 SSH2Q76I76 1423 aa20.86■□□□□ 0.93
ITGA4-201ENST00000233573 COG3Q96JB2 828 aa20.85■□□□□ 0.93
ITGA4-201ENST00000233573 CRBNQ96SW2 442 aa20.85■□□□□ 0.93
ITGA4-201ENST00000233573 PPM1GO15355 546 aaPredicted RBP20.84■□□□□ 0.93
ITGA4-201ENST00000233573 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
ITGA4-201ENST00000233573 RBM19Q9Y4C8 960 aaKnown RBP20.83■□□□□ 0.93
ITGA4-201ENST00000233573 EMILIN1Q9Y6C2 1016 aa20.83■□□□□ 0.93
ITGA4-201ENST00000233573 TMPOP42166 694 aaKnown RBP20.82■□□□□ 0.92
ITGA4-201ENST00000233573 OVOS2A0A0J9YW53 1432 aa20.82■□□□□ 0.92
ITGA4-201ENST00000233573 OVOS2Q6IE36 1432 aa20.82■□□□□ 0.92
ITGA4-201ENST00000233573 FCHSD2O94868 740 aa20.81■□□□□ 0.92
ITGA4-201ENST00000233573 RRS1Q15050 365 aaKnown RBP20.81■□□□□ 0.92
ITGA4-201ENST00000233573 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.81■□□□□ 0.92
ITGA4-201ENST00000233573 TRIM35Q9UPQ4 493 aa20.81■□□□□ 0.92
ITGA4-201ENST00000233573 PIK3C2AO00443 1686 aa20.8■□□□□ 0.92
ITGA4-201ENST00000233573 BCAR3O75815 825 aa20.8■□□□□ 0.92
ITGA4-201ENST00000233573 PHF8Q9UPP1 1060 aa20.8■□□□□ 0.92
ITGA4-201ENST00000233573 IL13P35225 146 aa20.79■□□□□ 0.92
ITGA4-201ENST00000233573 ESCO1Q5FWF5 840 aa20.79■□□□□ 0.92
ITGA4-201ENST00000233573 RSPH6AQ9H0K4 717 aa20.79■□□□□ 0.92
ITGA4-201ENST00000233573 TMEM94Q12767 1356 aa20.79■□□□□ 0.92
ITGA4-201ENST00000233573 PNNQ9H307 717 aaKnown RBP20.79■□□□□ 0.92
ITGA4-201ENST00000233573 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
ITGA4-201ENST00000233573 SOX12O15370 315 aa20.77■□□□□ 0.92
ITGA4-201ENST00000233573 TTC21AQ8NDW8 1320 aa20.77■□□□□ 0.92
ITGA4-201ENST00000233573 ORAI2Q96SN7 254 aa20.77■□□□□ 0.92
ITGA4-201ENST00000233573 USP31Q70CQ4 1352 aa20.76■□□□□ 0.91
ITGA4-201ENST00000233573 NUTM2GQ5VZR2 741 aa20.76■□□□□ 0.91
ITGA4-201ENST00000233573 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
ITGA4-201ENST00000233573 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
ITGA4-201ENST00000233573 C19orf44Q9H6X5 657 aa20.74■□□□□ 0.91
ITGA4-201ENST00000233573 IL16Q14005 1332 aa20.74■□□□□ 0.91
ITGA4-201ENST00000233573 PRKAR2BP31323 418 aa20.74■□□□□ 0.91
ITGA4-201ENST00000233573 RARSP54136 660 aaKnown RBP20.74■□□□□ 0.91
ITGA4-201ENST00000233573 MARF1Q9Y4F3 1742 aaKnown RBP20.74■□□□□ 0.91
ITGA4-201ENST00000233573 PEAK1Q9H792 1746 aa20.73■□□□□ 0.91
ITGA4-201ENST00000233573 RIPK4P57078 832 aa20.73■□□□□ 0.91
ITGA4-201ENST00000233573 XPCQ01831 940 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms