RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ADGRB2O60241 1585 aa15.67■□□□□ 0.1
NUP88-201ENST00000225696 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
NUP88-201ENST00000225696 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
NUP88-201ENST00000225696 ANKRD36BQ8N2N9 1353 aa15.67■□□□□ 0.1
NUP88-201ENST00000225696 PPLO60437 1756 aa15.66■□□□□ 0.1
NUP88-201ENST00000225696 ZBTB40Q9NUA8 1239 aa15.66■□□□□ 0.1
NUP88-201ENST00000225696 USP32Q8NFA0 1604 aa15.66■□□□□ 0.1
NUP88-201ENST00000225696 CYB5RLQ6IPT4 315 aa15.66■□□□□ 0.1
NUP88-201ENST00000225696 LNPKQ9C0E8 428 aa15.66■□□□□ 0.1
NUP88-201ENST00000225696 GLI2P10070 1586 aa15.66■□□□□ 0.1
NUP88-201ENST00000225696 DDX19BQ9UMR2 479 aa15.65■□□□□ 0.1
NUP88-201ENST00000225696 EVC2Q86UK5 1308 aa15.65■□□□□ 0.1
NUP88-201ENST00000225696 A0A1W2PP64 1363 aa15.64■□□□□ 0.09
NUP88-201ENST00000225696 DDIT3P35638 169 aa15.64■□□□□ 0.09
NUP88-201ENST00000225696 STK26Q9P289 416 aa15.63■□□□□ 0.09
NUP88-201ENST00000225696 RIPK4P57078 832 aa15.63■□□□□ 0.09
NUP88-201ENST00000225696 LMTK2Q8IWU2 1503 aa15.62■□□□□ 0.09
NUP88-201ENST00000225696 CD2BP2O95400 341 aaKnown RBP15.62■□□□□ 0.09
NUP88-201ENST00000225696 FBLN1P23142 703 aa15.62■□□□□ 0.09
NUP88-201ENST00000225696 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
NUP88-201ENST00000225696 UBE2Q2Q8WVN8 375 aa15.62■□□□□ 0.09
NUP88-201ENST00000225696 CT47B1P0C2W7 299 aaPredicted RBP15.62■□□□□ 0.09
NUP88-201ENST00000225696 NUCB1Q02818 461 aa15.62■□□□□ 0.09
NUP88-201ENST00000225696 HSCBQ8IWL3 235 aa15.62■□□□□ 0.09
NUP88-201ENST00000225696 COL3A1P02461 1466 aaPredicted RBP15.61■□□□□ 0.09
NUP88-201ENST00000225696 FYB1O15117 783 aa15.61■□□□□ 0.09
NUP88-201ENST00000225696 KIF2CQ99661 725 aa15.6■□□□□ 0.09
NUP88-201ENST00000225696 C1orf115Q9H7X2 142 aa15.6■□□□□ 0.09
NUP88-201ENST00000225696 RBM25P49756 843 aaKnown RBP15.6■□□□□ 0.09
NUP88-201ENST00000225696 SRPK2P78362 688 aaKnown RBP15.6■□□□□ 0.09
NUP88-201ENST00000225696 TNPO1Q92973 898 aaKnown RBP15.6■□□□□ 0.09
NUP88-201ENST00000225696 FOXD4L1Q9NU39 408 aa15.6■□□□□ 0.09
NUP88-201ENST00000225696 NCOA3Q9Y6Q9 1424 aa15.6■□□□□ 0.09
NUP88-201ENST00000225696 NSD2O96028 1365 aa15.6■□□□□ 0.09
NUP88-201ENST00000225696 ABCC11Q96J66 1382 aa15.6■□□□□ 0.09
NUP88-201ENST00000225696 ARHGEF28Q8N1W1 1705 aaKnown RBP15.59■□□□□ 0.09
NUP88-201ENST00000225696 GAS2L3Q86XJ1 694 aa15.59■□□□□ 0.09
NUP88-201ENST00000225696 CHD1LQ86WJ1 897 aa15.59■□□□□ 0.09
NUP88-201ENST00000225696 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
NUP88-201ENST00000225696 NEO1Q92859 1461 aa15.59■□□□□ 0.09
NUP88-201ENST00000225696 FRMPD1Q5SYB0 1578 aa15.58■□□□□ 0.08
NUP88-201ENST00000225696 THUMPD2Q9BTF0 503 aaKnown RBP15.58■□□□□ 0.08
NUP88-201ENST00000225696 GRPEL1Q9HAV7 217 aa15.58■□□□□ 0.08
NUP88-201ENST00000225696 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
NUP88-201ENST00000225696 CAMSAP1Q5T5Y3 1602 aa15.57■□□□□ 0.08
NUP88-201ENST00000225696 RPGRIP1LQ68CZ1 1315 aa15.57■□□□□ 0.08
NUP88-201ENST00000225696 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
NUP88-201ENST00000225696 MRE11P49959 708 aa15.56■□□□□ 0.08
NUP88-201ENST00000225696 PUS7Q96PZ0 661 aaKnown RBP15.56■□□□□ 0.08
NUP88-201ENST00000225696 SIGLEC1Q9BZZ2 1709 aa15.56■□□□□ 0.08
NUP88-201ENST00000225696 CLCN1P35523 988 aa15.55■□□□□ 0.08
NUP88-201ENST00000225696 ANKRD45Q5TZF3 282 aa15.55■□□□□ 0.08
NUP88-201ENST00000225696 TSPYL6Q8N831 410 aa15.55■□□□□ 0.08
NUP88-201ENST00000225696 SNX21Q969T3 373 aa15.55■□□□□ 0.08
NUP88-201ENST00000225696 IL16Q14005 1332 aa15.55■□□□□ 0.08
NUP88-201ENST00000225696 PPIP5K1Q6PFW1 1433 aa15.55■□□□□ 0.08
NUP88-201ENST00000225696 DDX11L8A8MPP1 907 aa15.55■□□□□ 0.08
NUP88-201ENST00000225696 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
NUP88-201ENST00000225696 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
NUP88-201ENST00000225696 SIRT2Q8IXJ6 389 aa15.55■□□□□ 0.08
NUP88-201ENST00000225696 CD163L1Q9NR16 1453 aa15.54■□□□□ 0.08
NUP88-201ENST00000225696 KIF16BQ96L93 1317 aa15.54■□□□□ 0.08
NUP88-201ENST00000225696 ELL2O00472 640 aaPredicted RBP15.54■□□□□ 0.08
NUP88-201ENST00000225696 ZBTB7BO15156 539 aaPredicted RBP15.54■□□□□ 0.08
NUP88-201ENST00000225696 PHACTR3Q96KR7 559 aa15.54■□□□□ 0.08
NUP88-201ENST00000225696 DIP2BQ9P265 1576 aa15.54■□□□□ 0.08
NUP88-201ENST00000225696 IPO8O15397 1037 aaKnown RBP15.53■□□□□ 0.08
NUP88-201ENST00000225696 HSP90AB1P08238 724 aaKnown RBP15.53■□□□□ 0.08
NUP88-201ENST00000225696 IDI1Q13907 227 aa15.53■□□□□ 0.08
NUP88-201ENST00000225696 NAP1L5Q96NT1 182 aaPredicted RBP15.53■□□□□ 0.08
NUP88-201ENST00000225696 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
NUP88-201ENST00000225696 NEXMIFQ5QGS0 1516 aa15.53■□□□□ 0.08
NUP88-201ENST00000225696 TBC1D9Q6ZT07 1266 aa15.53■□□□□ 0.08
NUP88-201ENST00000225696 ABCC3O15438 1527 aa15.53■□□□□ 0.08
NUP88-201ENST00000225696 PRKAR2BP31323 418 aa15.52■□□□□ 0.08
NUP88-201ENST00000225696 RAB3GAP1Q15042 981 aa15.52■□□□□ 0.08
NUP88-201ENST00000225696 BMP2KLQ5H9B9 411 aa15.52■□□□□ 0.08
NUP88-201ENST00000225696 PRAM1Q96QH2 718 aa15.52■□□□□ 0.08
NUP88-201ENST00000225696 HMOX1P09601 288 aa15.51■□□□□ 0.07
NUP88-201ENST00000225696 ALDH1L2Q3SY69 923 aa15.51■□□□□ 0.07
NUP88-201ENST00000225696 VAMP4O75379 141 aa15.51■□□□□ 0.07
NUP88-201ENST00000225696 PNPLA6Q8IY17 1366 aa15.5■□□□□ 0.07
NUP88-201ENST00000225696 SSFA2P28290 1259 aa15.5■□□□□ 0.07
NUP88-201ENST00000225696 GAS2L2Q8NHY3 880 aa15.5■□□□□ 0.07
NUP88-201ENST00000225696 CABP1Q9NZU7 370 aa15.5■□□□□ 0.07
NUP88-201ENST00000225696 HECW2Q9P2P5 1572 aa15.5■□□□□ 0.07
NUP88-201ENST00000225696 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
NUP88-201ENST00000225696 RAPGEF3O95398 923 aa15.49■□□□□ 0.07
NUP88-201ENST00000225696 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
NUP88-201ENST00000225696 MRPL50Q8N5N7 158 aaKnown RBP15.49■□□□□ 0.07
NUP88-201ENST00000225696 TERF2IPQ9NYB0 399 aa15.49■□□□□ 0.07
NUP88-201ENST00000225696 LRRC7Q96NW7 1537 aa15.49■□□□□ 0.07
NUP88-201ENST00000225696 MED14O60244 1454 aa15.49■□□□□ 0.07
NUP88-201ENST00000225696 POGZQ7Z3K3 1410 aa15.48■□□□□ 0.07
NUP88-201ENST00000225696 ESPNB1AK53 854 aa15.48■□□□□ 0.07
NUP88-201ENST00000225696 FCHSD2O94868 740 aa15.48■□□□□ 0.07
NUP88-201ENST00000225696 POLKQ9UBT6 870 aa15.48■□□□□ 0.07
NUP88-201ENST00000225696 PTPRMP28827 1452 aa15.48■□□□□ 0.07
NUP88-201ENST00000225696 K7ELQ4 463 aaPredicted RBP15.47■□□□□ 0.07
NUP88-201ENST00000225696 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms