RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
RAB3D-201ENST00000222120 NLRP6P59044 892 aa16.88■□□□□ 0.29
RAB3D-201ENST00000222120 GBP4Q96PP9 640 aa16.88■□□□□ 0.29
RAB3D-201ENST00000222120 BLMP54132 1417 aaPredicted RBP16.88■□□□□ 0.29
RAB3D-201ENST00000222120 HMMRO75330 724 aa16.88■□□□□ 0.29
RAB3D-201ENST00000222120 RILPL2Q969X0 211 aa16.88■□□□□ 0.29
RAB3D-201ENST00000222120 CCDC61Q9Y6R9 512 aa16.88■□□□□ 0.29
RAB3D-201ENST00000222120 POLR3AO14802 1390 aaPredicted RBP16.88■□□□□ 0.29
RAB3D-201ENST00000222120 FOXD4L6Q3SYB3 417 aaPredicted RBP16.87■□□□□ 0.29
RAB3D-201ENST00000222120 FOXD4L3Q6VB84 417 aaPredicted RBP16.87■□□□□ 0.29
RAB3D-201ENST00000222120 FKBP5Q13451 457 aaPredicted RBP16.87■□□□□ 0.29
RAB3D-201ENST00000222120 NFE2L2Q16236 605 aa16.87■□□□□ 0.29
RAB3D-201ENST00000222120 ZNF518AQ6AHZ1 1483 aa16.87■□□□□ 0.29
RAB3D-201ENST00000222120 MCM10Q7L590 875 aa16.87■□□□□ 0.29
RAB3D-201ENST00000222120 ATP7AQ04656 1500 aa16.87■□□□□ 0.29
RAB3D-201ENST00000222120 KCNJ4P48050 445 aa16.85■□□□□ 0.29
RAB3D-201ENST00000222120 CEBPAP49715 358 aaPredicted RBP16.85■□□□□ 0.29
RAB3D-201ENST00000222120 CHMP5Q9NZZ3 219 aa16.85■□□□□ 0.29
RAB3D-201ENST00000222120 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
RAB3D-201ENST00000222120 ZMYM4Q5VZL5 1548 aa16.85■□□□□ 0.29
RAB3D-201ENST00000222120 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
RAB3D-201ENST00000222120 ANKRD36BQ8N2N9 1353 aa16.85■□□□□ 0.29
RAB3D-201ENST00000222120 NINLQ9Y2I6 1382 aa16.85■□□□□ 0.29
RAB3D-201ENST00000222120 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
RAB3D-201ENST00000222120 CHD1LQ86WJ1 897 aa16.84■□□□□ 0.29
RAB3D-201ENST00000222120 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
RAB3D-201ENST00000222120 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
RAB3D-201ENST00000222120 CT47B1P0C2W7 299 aaPredicted RBP16.83■□□□□ 0.29
RAB3D-201ENST00000222120 A0A1W2PP64 1363 aa16.83■□□□□ 0.28
RAB3D-201ENST00000222120 PLCB2Q00722 1185 aa16.82■□□□□ 0.28
RAB3D-201ENST00000222120 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
RAB3D-201ENST00000222120 PHACTR3Q96KR7 559 aa16.82■□□□□ 0.28
RAB3D-201ENST00000222120 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
RAB3D-201ENST00000222120 WASLO00401 505 aaPredicted RBP16.82■□□□□ 0.28
RAB3D-201ENST00000222120 ADCY10Q96PN6 1610 aa16.82■□□□□ 0.28
RAB3D-201ENST00000222120 CHD1O14646 1710 aa16.81■□□□□ 0.28
RAB3D-201ENST00000222120 PTPRTO14522 1441 aa16.81■□□□□ 0.28
RAB3D-201ENST00000222120 MCCP23508 829 aa16.81■□□□□ 0.28
RAB3D-201ENST00000222120 POLKQ9UBT6 870 aa16.81■□□□□ 0.28
RAB3D-201ENST00000222120 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
RAB3D-201ENST00000222120 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
RAB3D-201ENST00000222120 NPATQ14207 1427 aa16.8■□□□□ 0.28
RAB3D-201ENST00000222120 NPC1L1Q9UHC9 1359 aa16.79■□□□□ 0.28
RAB3D-201ENST00000222120 ZNF521Q96K83 1311 aa16.79■□□□□ 0.28
RAB3D-201ENST00000222120 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
RAB3D-201ENST00000222120 DDX49Q9Y6V7 483 aaKnown RBP16.78■□□□□ 0.28
RAB3D-201ENST00000222120 CDC42BPBQ9Y5S2 1711 aa16.78■□□□□ 0.28
RAB3D-201ENST00000222120 PTMAP06454 111 aaKnown RBP16.78■□□□□ 0.28
RAB3D-201ENST00000222120 MBIPQ9NS73 344 aa16.78■□□□□ 0.28
RAB3D-201ENST00000222120 CSB-PGBD3P0DP91 1061 aa16.78■□□□□ 0.28
RAB3D-201ENST00000222120 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
RAB3D-201ENST00000222120 AEBP1Q8IUX7 1158 aa16.77■□□□□ 0.28
RAB3D-201ENST00000222120 ERVK-7P63135 1459 aa16.77■□□□□ 0.28
RAB3D-201ENST00000222120 TEFQ10587 303 aa16.77■□□□□ 0.28
RAB3D-201ENST00000222120 PRDM15P57071 1507 aaPredicted RBP16.77■□□□□ 0.27
RAB3D-201ENST00000222120 ABCC1P33527 1531 aa16.77■□□□□ 0.27
RAB3D-201ENST00000222120 ST18O60284 1047 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 KRT24Q2M2I5 525 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 KIAA1211Q6ZU35 1233 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 SMARCA5O60264 1052 aaPredicted RBP16.76■□□□□ 0.27
RAB3D-201ENST00000222120 CDC45O75419 566 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 GCC1Q96CN9 775 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 F6X3S4 739 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 CCDC27Q2M243 656 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 PSME1Q06323 249 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 CFAP44Q96MT7 982 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 ANO2Q9NQ90 1003 aa16.76■□□□□ 0.27
RAB3D-201ENST00000222120 DDX11L8A8MPP1 907 aa16.75■□□□□ 0.27
RAB3D-201ENST00000222120 TRAK2O60296 914 aa16.75■□□□□ 0.27
RAB3D-201ENST00000222120 TRIM35Q9UPQ4 493 aa16.75■□□□□ 0.27
RAB3D-201ENST00000222120 ZNF330Q9Y3S2 320 aaPredicted RBP16.75■□□□□ 0.27
RAB3D-201ENST00000222120 NSD2O96028 1365 aa16.75■□□□□ 0.27
RAB3D-201ENST00000222120 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
RAB3D-201ENST00000222120 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
RAB3D-201ENST00000222120 CCDC9Q9Y3X0 531 aaKnown RBP16.74■□□□□ 0.27
RAB3D-201ENST00000222120 TRPM1Q7Z4N2 1603 aa16.74■□□□□ 0.27
RAB3D-201ENST00000222120 TRMT2AQ8IZ69 625 aaKnown RBP16.73■□□□□ 0.27
RAB3D-201ENST00000222120 TBC1D32Q96NH3 1257 aa16.73■□□□□ 0.27
RAB3D-201ENST00000222120 NAP1L2Q9ULW6 460 aaPredicted RBP16.73■□□□□ 0.27
RAB3D-201ENST00000222120 ALDH1L2Q3SY69 923 aa16.73■□□□□ 0.27
RAB3D-201ENST00000222120 ZCCHC11Q5TAX3 1644 aaKnown RBP16.72■□□□□ 0.27
RAB3D-201ENST00000222120 ABCC11Q96J66 1382 aa16.72■□□□□ 0.27
RAB3D-201ENST00000222120 INTS3Q68E01 1043 aaKnown RBP16.72■□□□□ 0.27
RAB3D-201ENST00000222120 IFT57Q9NWB7 429 aa16.72■□□□□ 0.27
RAB3D-201ENST00000222120 FGD1P98174 961 aa16.72■□□□□ 0.27
RAB3D-201ENST00000222120 EXOC6BQ9Y2D4 811 aa16.72■□□□□ 0.27
RAB3D-201ENST00000222120 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
RAB3D-201ENST00000222120 REC8O95072 547 aa16.71■□□□□ 0.27
RAB3D-201ENST00000222120 USHBP1Q8N6Y0 703 aa16.71■□□□□ 0.27
RAB3D-201ENST00000222120 MCM4P33991 863 aa16.7■□□□□ 0.26
RAB3D-201ENST00000222120 TRPM2O94759 1503 aa16.7■□□□□ 0.26
RAB3D-201ENST00000222120 MCTP1Q6DN14 999 aa16.69■□□□□ 0.26
RAB3D-201ENST00000222120 ACEP12821 1306 aa16.69■□□□□ 0.26
RAB3D-201ENST00000222120 AIMP1Q12904 312 aaKnown RBP16.69■□□□□ 0.26
RAB3D-201ENST00000222120 CHMP3Q9Y3E7 222 aa16.69■□□□□ 0.26
RAB3D-201ENST00000222120 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
RAB3D-201ENST00000222120 C9orf78Q9NZ63 289 aaPredicted RBP16.69■□□□□ 0.26
RAB3D-201ENST00000222120 VAMP4O75379 141 aa16.68■□□□□ 0.26
RAB3D-201ENST00000222120 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms