RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 NSD3Q9BZ95 1437 aa18.09■□□□□ 0.49
TIMP1-201ENST00000218388 TTC21AQ8NDW8 1320 aa18.09■□□□□ 0.49
TIMP1-201ENST00000218388 XPCQ01831 940 aaPredicted RBP18.09■□□□□ 0.49
TIMP1-201ENST00000218388 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.48
TIMP1-201ENST00000218388 TNS3Q68CZ2 1445 aa18.07■□□□□ 0.48
TIMP1-201ENST00000218388 SSH2Q76I76 1423 aa18.07■□□□□ 0.48
TIMP1-201ENST00000218388 TTC21BQ7Z4L5 1316 aa18.07■□□□□ 0.48
TIMP1-201ENST00000218388 DDX10Q13206 875 aaKnown RBP18.07■□□□□ 0.48
TIMP1-201ENST00000218388 LRRC59Q96AG4 307 aaKnown RBP18.07■□□□□ 0.48
TIMP1-201ENST00000218388 KNSTRNQ9Y448 316 aa18.07■□□□□ 0.48
TIMP1-201ENST00000218388 COL16A1Q07092 1604 aaPredicted RBP18.07■□□□□ 0.48
TIMP1-201ENST00000218388 ARHGEF10O15013 1369 aa18.05■□□□□ 0.48
TIMP1-201ENST00000218388 KIF20BQ96Q89 1820 aa18.05■□□□□ 0.48
TIMP1-201ENST00000218388 CGNL1Q0VF96 1302 aa18.05■□□□□ 0.48
TIMP1-201ENST00000218388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.05■□□□□ 0.48
TIMP1-201ENST00000218388 ALS2Q96Q42 1657 aa18.05■□□□□ 0.48
TIMP1-201ENST00000218388 SPATA31A3Q5VYP0 1347 aa18.04■□□□□ 0.48
TIMP1-201ENST00000218388 LMOD2Q6P5Q4 547 aa18.04■□□□□ 0.48
TIMP1-201ENST00000218388 ILDR1Q86SU0 546 aaPredicted RBP18.04■□□□□ 0.48
TIMP1-201ENST00000218388 CARD14Q9BXL6 1004 aa18.04■□□□□ 0.48
TIMP1-201ENST00000218388 ABTB2Q8N961 1025 aa18.03■□□□□ 0.48
TIMP1-201ENST00000218388 PIK3C2AO00443 1686 aa18.03■□□□□ 0.48
TIMP1-201ENST00000218388 NSD2O96028 1365 aa18.02■□□□□ 0.47
TIMP1-201ENST00000218388 HSPA1LP34931 641 aa18.01■□□□□ 0.47
TIMP1-201ENST00000218388 PER1O15534 1290 aaPredicted RBP18■□□□□ 0.47
TIMP1-201ENST00000218388 NLRP13Q86W25 1043 aa18■□□□□ 0.47
TIMP1-201ENST00000218388 ANKRD26Q9UPS8 1709 aa18■□□□□ 0.47
TIMP1-201ENST00000218388 SHPRHQ149N8 1683 aa17.99■□□□□ 0.47
TIMP1-201ENST00000218388 USP54Q70EL1 1684 aa17.99■□□□□ 0.47
TIMP1-201ENST00000218388 NME9Q86XW9 330 aa17.99■□□□□ 0.47
TIMP1-201ENST00000218388 JCADQ9P266 1359 aa17.99■□□□□ 0.47
TIMP1-201ENST00000218388 NPC1L1Q9UHC9 1359 aa17.99■□□□□ 0.47
TIMP1-201ENST00000218388 COL22A1Q8NFW1 1626 aaPredicted RBP17.98■□□□□ 0.47
TIMP1-201ENST00000218388 NLRP6P59044 892 aa17.98■□□□□ 0.47
TIMP1-201ENST00000218388 COG3Q96JB2 828 aa17.98■□□□□ 0.47
TIMP1-201ENST00000218388 USP31Q70CQ4 1352 aa17.98■□□□□ 0.47
TIMP1-201ENST00000218388 MED1Q15648 1581 aaPredicted RBP17.98■□□□□ 0.47
TIMP1-201ENST00000218388 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
TIMP1-201ENST00000218388 FYB1O15117 783 aa17.97■□□□□ 0.47
TIMP1-201ENST00000218388 AMER1Q5JTC6 1135 aaPredicted RBP17.97■□□□□ 0.47
TIMP1-201ENST00000218388 NUTM2GQ5VZR2 741 aa17.96■□□□□ 0.47
TIMP1-201ENST00000218388 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
TIMP1-201ENST00000218388 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
TIMP1-201ENST00000218388 GGNBP2Q9H3C7 697 aa17.95■□□□□ 0.46
TIMP1-201ENST00000218388 HAP1P54257 671 aaPredicted RBP17.94■□□□□ 0.46
TIMP1-201ENST00000218388 MARF1Q9Y4F3 1742 aaKnown RBP17.94■□□□□ 0.46
TIMP1-201ENST00000218388 USP19O94966 1318 aa17.94■□□□□ 0.46
TIMP1-201ENST00000218388 PHRF1Q9P1Y6 1649 aaKnown RBP17.94■□□□□ 0.46
TIMP1-201ENST00000218388 ABCA3Q99758 1704 aa17.93■□□□□ 0.46
TIMP1-201ENST00000218388 CRYBG1Q9Y4K1 1723 aa17.93■□□□□ 0.46
TIMP1-201ENST00000218388 CC2D1BQ5T0F9 858 aaKnown RBP17.93■□□□□ 0.46
TIMP1-201ENST00000218388 KCNH5Q8NCM2 988 aa17.93■□□□□ 0.46
TIMP1-201ENST00000218388 SLIT3O75094 1523 aa17.93■□□□□ 0.46
TIMP1-201ENST00000218388 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
TIMP1-201ENST00000218388 ZRANB1Q9UGI0 708 aa17.92■□□□□ 0.46
TIMP1-201ENST00000218388 SPATA31A6Q5VVP1 1343 aa17.92■□□□□ 0.46
TIMP1-201ENST00000218388 PLEKHG5O94827 1062 aa17.9■□□□□ 0.46
TIMP1-201ENST00000218388 CNGB1Q14028 1251 aaPredicted RBP17.89■□□□□ 0.45
TIMP1-201ENST00000218388 GCP02774 474 aa17.88■□□□□ 0.45
TIMP1-201ENST00000218388 CABLES1Q8TDN4 633 aa17.88■□□□□ 0.45
TIMP1-201ENST00000218388 RALBP1Q15311 655 aa17.87■□□□□ 0.45
TIMP1-201ENST00000218388 NFAT5O94916 1531 aa17.87■□□□□ 0.45
TIMP1-201ENST00000218388 SOX12O15370 315 aa17.86■□□□□ 0.45
TIMP1-201ENST00000218388 ANP32CO43423 234 aa17.86■□□□□ 0.45
TIMP1-201ENST00000218388 AATKQ6ZMQ8 1374 aa17.86■□□□□ 0.45
TIMP1-201ENST00000218388 NUTM2BA6NNL0 878 aaPredicted RBP17.85■□□□□ 0.45
TIMP1-201ENST00000218388 NUTM2EB1AL46 878 aaPredicted RBP17.85■□□□□ 0.45
TIMP1-201ENST00000218388 NUTM2AQ8IVF1 878 aaPredicted RBP17.85■□□□□ 0.45
TIMP1-201ENST00000218388 PARD3Q8TEW0 1356 aa17.85■□□□□ 0.45
TIMP1-201ENST00000218388 LTN1O94822 1766 aa17.84■□□□□ 0.45
TIMP1-201ENST00000218388 CPDO75976 1380 aa17.84■□□□□ 0.45
TIMP1-201ENST00000218388 TNNT2P45379 298 aaPredicted RBP17.84■□□□□ 0.45
TIMP1-201ENST00000218388 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
TIMP1-201ENST00000218388 MAP2P11137 1827 aaKnown RBP17.84■□□□□ 0.45
TIMP1-201ENST00000218388 ZC3H6P61129 1189 aaKnown RBP17.82■□□□□ 0.44
TIMP1-201ENST00000218388 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
TIMP1-201ENST00000218388 PRDM11Q9NQV5 511 aa17.82■□□□□ 0.44
TIMP1-201ENST00000218388 ABCC6O95255 1503 aa17.82■□□□□ 0.44
TIMP1-201ENST00000218388 KIF24Q5T7B8 1368 aa17.81■□□□□ 0.44
TIMP1-201ENST00000218388 KIAA0232Q92628 1395 aa17.81■□□□□ 0.44
TIMP1-201ENST00000218388 ZBTB7CA1YPR0 619 aa17.81■□□□□ 0.44
TIMP1-201ENST00000218388 MEX3CQ5U5Q3 659 aaKnown RBP17.81■□□□□ 0.44
TIMP1-201ENST00000218388 COL14A1Q05707 1796 aaKnown RBP17.81■□□□□ 0.44
TIMP1-201ENST00000218388 RTL1A6NKG5 1358 aa17.8■□□□□ 0.44
TIMP1-201ENST00000218388 ADAMTS2O95450 1211 aa17.8■□□□□ 0.44
TIMP1-201ENST00000218388 RRS1Q15050 365 aaKnown RBP17.8■□□□□ 0.44
TIMP1-201ENST00000218388 ARHGEF25Q86VW2 580 aa17.8■□□□□ 0.44
TIMP1-201ENST00000218388 LRP6O75581 1613 aa17.8■□□□□ 0.44
TIMP1-201ENST00000218388 MAP3K19Q56UN5 1328 aa17.79■□□□□ 0.44
TIMP1-201ENST00000218388 MYBBP1AQ9BQG0 1328 aaKnown RBP17.79■□□□□ 0.44
TIMP1-201ENST00000218388 AMPHP49418 695 aa17.79■□□□□ 0.44
TIMP1-201ENST00000218388 SMG6Q86US8 1419 aaKnown RBP17.79■□□□□ 0.44
TIMP1-201ENST00000218388 PPP2R1AP30153 589 aa17.78■□□□□ 0.44
TIMP1-201ENST00000218388 FLT4P35916 1363 aa17.78■□□□□ 0.44
TIMP1-201ENST00000218388 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.44
TIMP1-201ENST00000218388 FBLN1P23142 703 aa17.77■□□□□ 0.44
TIMP1-201ENST00000218388 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
TIMP1-201ENST00000218388 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
TIMP1-201ENST00000218388 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
TIMP1-201ENST00000218388 BLMP54132 1417 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms