RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 CD109Q6YHK3 1445 aa16.84■□□□□ 0.29
SEMA3F-201ENST00000002829 XRCC6P12956 609 aaKnown RBP eCLIP16.84■□□□□ 0.29
SEMA3F-201ENST00000002829 AEBP1Q8IUX7 1158 aa16.84■□□□□ 0.29
SEMA3F-201ENST00000002829 ABCC10Q5T3U5 1492 aa16.84■□□□□ 0.29
SEMA3F-201ENST00000002829 MAP4K4O95819 1239 aaPredicted RBP16.84■□□□□ 0.29
SEMA3F-201ENST00000002829 TSPYL4Q9UJ04 414 aa16.84■□□□□ 0.29
SEMA3F-201ENST00000002829 ATAD2Q6PL18 1390 aa16.83■□□□□ 0.29
SEMA3F-201ENST00000002829 ADGRL2O95490 1459 aa16.83■□□□□ 0.29
SEMA3F-201ENST00000002829 SLC4A2P04920 1241 aa16.83■□□□□ 0.28
SEMA3F-201ENST00000002829 STAC3Q96MF2 364 aa16.83■□□□□ 0.28
SEMA3F-201ENST00000002829 ZMYND15Q9H091 742 aa16.83■□□□□ 0.28
SEMA3F-201ENST00000002829 RNF214Q8ND24 703 aa16.82■□□□□ 0.28
SEMA3F-201ENST00000002829 NLRP6P59044 892 aa16.82■□□□□ 0.28
SEMA3F-201ENST00000002829 A0A0U1RQG5 324 aaPredicted RBP16.82■□□□□ 0.28
SEMA3F-201ENST00000002829 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.82■□□□□ 0.28
SEMA3F-201ENST00000002829 ITSN2Q9NZM3 1697 aa16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 KIF16BQ96L93 1317 aa16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 USHBP1Q8N6Y0 703 aa16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 KDM5CP41229 1560 aa16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 GNAI1P63096 354 aa16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 CALD1Q05682 793 aaKnown RBP16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 MCM4P33991 863 aa16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 C16orf71Q8IYS4 520 aaPredicted RBP16.81■□□□□ 0.28
SEMA3F-201ENST00000002829 CHMP5Q9NZZ3 219 aa16.8■□□□□ 0.28
SEMA3F-201ENST00000002829 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
SEMA3F-201ENST00000002829 CHD1LQ86WJ1 897 aa16.8■□□□□ 0.28
SEMA3F-201ENST00000002829 NUDT16Q96DE0 195 aaKnown RBP16.8■□□□□ 0.28
SEMA3F-201ENST00000002829 GBP4Q96PP9 640 aa16.8■□□□□ 0.28
SEMA3F-201ENST00000002829 EXOC6BQ9Y2D4 811 aa16.8■□□□□ 0.28
SEMA3F-201ENST00000002829 ANO2Q9NQ90 1003 aa16.79■□□□□ 0.28
SEMA3F-201ENST00000002829 CHMP3Q9Y3E7 222 aa16.79■□□□□ 0.28
SEMA3F-201ENST00000002829 MCTP1Q6DN14 999 aa16.79■□□□□ 0.28
SEMA3F-201ENST00000002829 LARP6Q9BRS8 491 aaKnown RBP16.79■□□□□ 0.28
SEMA3F-201ENST00000002829 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
SEMA3F-201ENST00000002829 ASXL1Q8IXJ9 1541 aa16.78■□□□□ 0.28
SEMA3F-201ENST00000002829 ARHGEF12Q9NZN5 1544 aa16.78■□□□□ 0.28
SEMA3F-201ENST00000002829 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
SEMA3F-201ENST00000002829 C8orf58Q8NAV2 365 aa16.77■□□□□ 0.28
SEMA3F-201ENST00000002829 IL1RAPL2Q9NP60 686 aa16.77■□□□□ 0.28
SEMA3F-201ENST00000002829 HDGFP51858 240 aaKnown RBP16.77■□□□□ 0.27
SEMA3F-201ENST00000002829 CHMP4BQ9H444 224 aaKnown RBP16.77■□□□□ 0.27
SEMA3F-201ENST00000002829 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
SEMA3F-201ENST00000002829 HSP90AB2PQ58FF8 381 aa16.76■□□□□ 0.27
SEMA3F-201ENST00000002829 ASXL2Q76L83 1435 aa16.76■□□□□ 0.27
SEMA3F-201ENST00000002829 FOXO3O43524 673 aa16.75■□□□□ 0.27
SEMA3F-201ENST00000002829 HAP1P54257 671 aaPredicted RBP16.75■□□□□ 0.27
SEMA3F-201ENST00000002829 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
SEMA3F-201ENST00000002829 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
SEMA3F-201ENST00000002829 EID1Q9Y6B2 187 aa16.75■□□□□ 0.27
SEMA3F-201ENST00000002829 ANXA1P04083 346 aa16.74■□□□□ 0.27
SEMA3F-201ENST00000002829 RTEL1-TNFRSF6BF6WH68 1400 aa16.74■□□□□ 0.27
SEMA3F-201ENST00000002829 LMOD3Q0VAK6 560 aa16.74■□□□□ 0.27
SEMA3F-201ENST00000002829 NFE2L2Q16236 605 aa16.74■□□□□ 0.27
SEMA3F-201ENST00000002829 API5Q9BZZ5 524 aaKnown RBP16.74■□□□□ 0.27
SEMA3F-201ENST00000002829 GRPEL1Q9HAV7 217 aa16.74■□□□□ 0.27
SEMA3F-201ENST00000002829 ESPNB1AK53 854 aa16.73■□□□□ 0.27
SEMA3F-201ENST00000002829 PRDM10Q9NQV6 1147 aa16.73■□□□□ 0.27
SEMA3F-201ENST00000002829 POLKQ9UBT6 870 aa16.73■□□□□ 0.27
SEMA3F-201ENST00000002829 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
SEMA3F-201ENST00000002829 DUOX2Q9NRD8 1548 aa16.73■□□□□ 0.27
SEMA3F-201ENST00000002829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.73■□□□□ 0.27
SEMA3F-201ENST00000002829 CSB-PGBD3P0DP91 1061 aa16.72■□□□□ 0.27
SEMA3F-201ENST00000002829 CAVIN1Q6NZI2 390 aaKnown RBP16.72■□□□□ 0.27
SEMA3F-201ENST00000002829 A0A1W2PP64 1363 aa16.72■□□□□ 0.27
SEMA3F-201ENST00000002829 FCHSD2O94868 740 aa16.72■□□□□ 0.27
SEMA3F-201ENST00000002829 FGD1P98174 961 aa16.72■□□□□ 0.27
SEMA3F-201ENST00000002829 TRIM35Q9UPQ4 493 aa16.72■□□□□ 0.27
SEMA3F-201ENST00000002829 SHANK2Q9UPX8 1470 aa16.71■□□□□ 0.27
SEMA3F-201ENST00000002829 ABTB2Q8N961 1025 aa16.71■□□□□ 0.27
SEMA3F-201ENST00000002829 OTUD7AQ8TE49 926 aaPredicted RBP16.71■□□□□ 0.27
SEMA3F-201ENST00000002829 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
SEMA3F-201ENST00000002829 HMMRO75330 724 aa16.71■□□□□ 0.27
SEMA3F-201ENST00000002829 NEK4P51957 841 aa16.71■□□□□ 0.27
SEMA3F-201ENST00000002829 TBC1D32Q96NH3 1257 aa16.71■□□□□ 0.27
SEMA3F-201ENST00000002829 KIAA1211Q6ZU35 1233 aa16.7■□□□□ 0.26
SEMA3F-201ENST00000002829 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
SEMA3F-201ENST00000002829 TTC37Q6PGP7 1564 aa16.7■□□□□ 0.26
SEMA3F-201ENST00000002829 WDR7Q9Y4E6 1490 aa16.69■□□□□ 0.26
SEMA3F-201ENST00000002829 SSFA2P28290 1259 aa16.68■□□□□ 0.26
SEMA3F-201ENST00000002829 MRE11P49959 708 aa16.68■□□□□ 0.26
SEMA3F-201ENST00000002829 FOSBP53539 338 aa16.68■□□□□ 0.26
SEMA3F-201ENST00000002829 ZNF521Q96K83 1311 aa16.68■□□□□ 0.26
SEMA3F-201ENST00000002829 PRPF40AO75400 957 aaKnown RBP16.68■□□□□ 0.26
SEMA3F-201ENST00000002829 CDC45O75419 566 aa16.68■□□□□ 0.26
SEMA3F-201ENST00000002829 BLMP54132 1417 aaPredicted RBP16.67■□□□□ 0.26
SEMA3F-201ENST00000002829 NASPP49321 788 aaPredicted RBP16.67■□□□□ 0.26
SEMA3F-201ENST00000002829 MEIS3Q99687 375 aa16.67■□□□□ 0.26
SEMA3F-201ENST00000002829 SURF6O75683 361 aaKnown RBP16.67■□□□□ 0.26
SEMA3F-201ENST00000002829 TEFQ10587 303 aa16.67■□□□□ 0.26
SEMA3F-201ENST00000002829 TBC1D9Q6ZT07 1266 aa16.67■□□□□ 0.26
SEMA3F-201ENST00000002829 CHAMP1Q96JM3 812 aa16.67■□□□□ 0.26
SEMA3F-201ENST00000002829 ST18O60284 1047 aa16.67■□□□□ 0.26
SEMA3F-201ENST00000002829 CCDC27Q2M243 656 aa16.66■□□□□ 0.26
SEMA3F-201ENST00000002829 NUTM1Q86Y26 1132 aa16.66■□□□□ 0.26
SEMA3F-201ENST00000002829 ATP10AO60312 1499 aa16.65■□□□□ 0.26
SEMA3F-201ENST00000002829 DDX11L8A8MPP1 907 aa16.65■□□□□ 0.26
SEMA3F-201ENST00000002829 WASLO00401 505 aaPredicted RBP16.65■□□□□ 0.26
SEMA3F-201ENST00000002829 ABCA8O94911 1581 aa16.65■□□□□ 0.26
SEMA3F-201ENST00000002829 MCCP23508 829 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms