RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 NCEH1Q6PIU2 408 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 KANSL1Q7Z3B3 1105 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 STK32AQ8WU08 396 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 PTPRN2Q92932 1015 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 CCDC34Q96HJ3 373 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 SLC6A18Q96N87 628 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 SERPINB11Q96P15 392 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 TSG101Q99816 390 aa17.02■□□□□ 0.32
CLN3-255ENST00000637100 EDDM13A0A1B0GTR0 161 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 LRRC72A6NJI9 287 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 WNT9AO14904 365 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 RNASEH1O60930 286 aaKnown RBP17.01■□□□□ 0.31
CLN3-255ENST00000637100 LUC7L3O95232 432 aaKnown RBP17.01■□□□□ 0.31
CLN3-255ENST00000637100 GOT1P17174 413 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 CD38P28907 300 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 SLC8A1P32418 973 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 PLK1P53350 603 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 SLC12A1Q13621 1099 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 SFMBT2Q5VUG0 894 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 DHRS13Q6UX07 377 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 AADATQ8N5Z0 425 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 KAT5Q92993 513 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 SKA1Q96BD8 255 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 CEP63Q96MT8 703 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 NT5C1BQ96P26 610 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 SLC4A5Q9BY07 1137 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 NUCKS1Q9H1E3 243 aaKnown RBP17.01■□□□□ 0.31
CLN3-255ENST00000637100 FTSJ1Q9UET6 329 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 SLCO3A1Q9UIG8 710 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 ATP6V1DQ9Y5K8 247 aa17.01■□□□□ 0.31
CLN3-255ENST00000637100 FAM149AA5PLN7 773 aa17■□□□□ 0.31
CLN3-255ENST00000637100 TTC34A8MYJ7 566 aa17■□□□□ 0.31
CLN3-255ENST00000637100 ENC1O14682 589 aa17■□□□□ 0.31
CLN3-255ENST00000637100 SART1O43290 800 aaKnown RBP17■□□□□ 0.31
CLN3-255ENST00000637100 C5AR1P21730 350 aa17■□□□□ 0.31
CLN3-255ENST00000637100 CTSOP43234 321 aaPredicted RBP17■□□□□ 0.31
CLN3-255ENST00000637100 C21orf59P57076 290 aa17■□□□□ 0.31
CLN3-255ENST00000637100 ECT2LQ008S8 904 aa17■□□□□ 0.31
CLN3-255ENST00000637100 LRMPQ12912 555 aa17■□□□□ 0.31
CLN3-255ENST00000637100 MMS22LQ6ZRQ5 1243 aa17■□□□□ 0.31
CLN3-255ENST00000637100 ADAT2Q7Z6V5 191 aaKnown RBP17■□□□□ 0.31
CLN3-255ENST00000637100 DHX40Q8IX18 779 aaKnown RBP17■□□□□ 0.31
CLN3-255ENST00000637100 PRMT1Q99873 361 aaKnown RBP17■□□□□ 0.31
CLN3-255ENST00000637100 KDM4CQ9H3R0 1056 aa17■□□□□ 0.31
CLN3-255ENST00000637100 STIM2Q9P246 746 aa17■□□□□ 0.31
CLN3-255ENST00000637100 ARHGAP20Q9P2F6 1191 aa17■□□□□ 0.31
CLN3-255ENST00000637100 NAALADL1Q9UQQ1 740 aa17■□□□□ 0.31
CLN3-255ENST00000637100 PCDHB4Q9Y5E5 795 aa17■□□□□ 0.31
CLN3-255ENST00000637100 ASXL3Q9C0F0 2248 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 A0A1W2PP55 124 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 TRIM49BA6NDI0 452 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 M0QYV0 167 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 ADH1BP00325 375 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 BRD2P25440 801 aaKnown RBP16.99■□□□□ 0.31
CLN3-255ENST00000637100 EPHA8P29322 1005 aaPredicted RBP16.99■□□□□ 0.31
CLN3-255ENST00000637100 DRD3P35462 400 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 ACADVLP49748 655 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 ADPRHP54922 357 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 NXPH1P58417 271 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 RTP5Q14D33 572 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 SYPL2Q5VXT5 272 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 FBXL19Q6PCT2 694 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 SND1Q7KZF4 910 aaKnown RBP eCLIP16.99■□□□□ 0.311e-7■■■□□ 15.8
CLN3-255ENST00000637100 TMEM110Q86TL2 294 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 IQCHQ86VS3 1027 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 GATAD2AQ86YP4 633 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 MMAAQ8IVH4 418 aaKnown RBP16.99■□□□□ 0.31
CLN3-255ENST00000637100 ELOA2Q8IYF1 753 aaPredicted RBP16.99■□□□□ 0.31
CLN3-255ENST00000637100 APCDD1Q8J025 514 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 CARNMT1Q8N4J0 409 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 FRS2Q8WU20 508 aa16.99■□□□□ 0.31
CLN3-255ENST00000637100 DHTKD1Q96HY7 919 aaPredicted RBP16.99■□□□□ 0.31
CLN3-255ENST00000637100 XPO7Q9UIA9 1087 aaKnown RBP16.99■□□□□ 0.31
CLN3-255ENST00000637100 HELZ2Q9BYK8 2649 aaKnown RBP16.98■□□□□ 0.31
CLN3-255ENST00000637100 TYW5A2RUC4 315 aaKnown RBP16.98■□□□□ 0.31
CLN3-255ENST00000637100 GOLGA8CPA6NN73 597 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 PIK3R2O00459 728 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 RNASEH2AO75792 299 aaKnown RBP16.98■□□□□ 0.31
CLN3-255ENST00000637100 NUDT1P36639 197 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 ACADSBP45954 432 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 IL9RQ01113 521 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 ILKQ13418 452 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 CDH18Q13634 790 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 ELAVL3Q14576 367 aaKnown RBP16.98■□□□□ 0.31
CLN3-255ENST00000637100 PRAMEF14Q5SWL7 426 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 TAC4Q86UU9 113 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 CFAP52Q8N1V2 620 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 MFSD2AQ8NA29 543 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 EHBP1Q8NDI1 1231 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 RFFLQ8WZ73 363 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 ALG14Q96F25 216 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 LRIG1Q96JA1 1093 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 KREMEN1Q96MU8 473 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 TIGD1Q96MW7 591 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 OMDQ99983 421 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 TRIM62Q9BVG3 475 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 NRSN2Q9GZP1 204 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 GDF3Q9NR23 364 aa16.98■□□□□ 0.31
CLN3-255ENST00000637100 ARID1BQ8NFD5 2236 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms