RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 TSPY1Q01534 308 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 CRHR2Q13324 411 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 TUSC3Q13454 348 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 TEX44Q53QW1 395 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 FAM182AQ5T1J6 154 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 LONP2Q86WA8 852 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 WDR75Q8IWA0 830 aaKnown RBP12.42□□□□□ -0.42
CLN8-212ENST00000637083 ARHGAP24Q8N264 748 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 LZTR1Q8N653 840 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLN8-212ENST00000637083 SREK1Q8WXA9 508 aaKnown RBP12.42□□□□□ -0.42
CLN8-212ENST00000637083 TBC1D31Q96DN5 1066 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 TBC1D10AQ9BXI6 508 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 GBA3Q9H227 469 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 STN1Q9H668 368 aaKnown RBP12.42□□□□□ -0.42
CLN8-212ENST00000637083 TLE6Q9H808 572 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 NSMCE4AQ9NXX6 385 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 KANSL3Q9P2N6 904 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 VANGL2Q9ULK5 521 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 PADI3Q9ULW8 664 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 TSC2P49815 1807 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 A0A0U1RQF3 1178 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 HMX2A2RU54 273 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 FAM72CH0Y354 149 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 M0QZQ0 153 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 KCNK1O00180 336 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 SEPT4O43236 478 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 B3GAT3O94766 335 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 CBX6O95503 412 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 GRK2P25098 689 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 EPHB2P29323 1055 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 SERPINB3P29508 390 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 THPOP40225 353 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 OCRLQ01968 901 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 E2F5Q15329 346 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 CTC1Q2NKJ3 1217 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 CCDC153Q494R4 210 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 BRMS1LQ5PSV4 323 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 FAM72AQ5TYM5 149 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 NAPEPLDQ6IQ20 393 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 FAM72DQ6L9T8 149 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 C4orf50Q6ZRC1 276 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 GPRIN1Q7Z2K8 1008 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 FAM72BQ86X60 149 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 C3orf58Q8NDZ4 430 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 CFAP61Q8NHU2 1237 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 ADAM32Q8TC27 787 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 AGAP11Q8TF27 550 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 BTBD10Q9BSF8 475 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 IL22Q9GZX6 179 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 EBF2Q9HAK2 575 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 CASS4Q9NQ75 786 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 ABCC13Q9NSE7 274 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 SORCS3Q9UPU3 1222 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 NR2E3Q9Y5X4 410 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 SQORQ9Y6N5 450 aa12.42□□□□□ -0.42
CLN8-212ENST00000637083 FAM237BA0A1B0GVD1 139 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 F5H423 210 aaPredicted RBP12.41□□□□□ -0.42
CLN8-212ENST00000637083 SNNO75324 88 aaPredicted RBP12.41□□□□□ -0.42
CLN8-212ENST00000637083 PGK1P00558 417 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 MPOP05164 745 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 SLC10A3P09131 477 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 ESRRAP11474 423 aaPredicted RBP12.41□□□□□ -0.42
CLN8-212ENST00000637083 TYMPP19971 482 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 TYK2P29597 1187 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 HADHAP40939 763 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 CDK7P50613 346 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 AFF1P51825 1210 aaKnown RBP12.41□□□□□ -0.42
CLN8-212ENST00000637083 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLN8-212ENST00000637083 OR52K1Q8NGK4 314 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 ANKRD27Q96NW4 1050 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 TRIM56Q9BRZ2 755 aaKnown RBP12.41□□□□□ -0.42
CLN8-212ENST00000637083 CEP41Q9BYV8 373 aa12.41□□□□□ -0.42
CLN8-212ENST00000637083 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.41□□□□□ -0.42
CLN8-212ENST00000637083 AAR2Q9Y312 384 aaKnown RBP12.41□□□□□ -0.42
CLN8-212ENST00000637083 ARHGAP42A6NI28 874 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 TPP1O14773 563 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 FGF10O15520 208 aaPredicted RBP12.4□□□□□ -0.42
CLN8-212ENST00000637083 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
CLN8-212ENST00000637083 TIMM44O43615 452 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 BDNFP23560 247 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 CCNCP24863 283 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 SERPINB8P50452 374 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 CRADDP78560 199 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 CDH17Q12864 832 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 FASTKD1Q53R41 847 aaKnown RBP12.4□□□□□ -0.42
CLN8-212ENST00000637083 OVOS1Q6IE37 1185 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 TMEM135Q86UB9 458 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 ARID3BQ8IVW6 561 aaPredicted RBP12.4□□□□□ -0.42
CLN8-212ENST00000637083 PPP4R1Q8TF05 950 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 EDEM1Q92611 657 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 TEKT5Q96M29 485 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 TSGA13Q96PP4 275 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 HAPLN3Q96S86 360 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 CATSPERBQ9H7T0 1116 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 CACNG4Q9UBN1 327 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 MID2Q9UJV3 735 aa12.4□□□□□ -0.42
CLN8-212ENST00000637083 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.4□□□□□ -0.42
CLN8-212ENST00000637083 FAM155AB1AL88 458 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms