RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	LSM1	O15116	133 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	PRPF3	O43395	683 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	MGEA5	O60502	916 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	HNRNPCL1	O60812	293 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	RTN2	O75298	545 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	TIPRL	O75663	272 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	UNC5C	O95185	931 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	EPN2	O95208	641 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	GUCA1C	O95843	209 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	SCG2	P13521	617 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	HDC	P19113	662 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	MUT	P22033	750 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	U2AF2	P26368	475 aa	Known RBP eCLIP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	PBLD	P30039	288 aa	Predicted RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	MCM5	P33992	734 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	HTR3A	P46098	478 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	FOXG1	P55316	489 aa	Predicted RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	BASP1	P80723	227 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	BECN1	Q14457	450 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	DAZAP2	Q15038	168 aa	Predicted RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	KRT71	Q3SY84	523 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	SETMAR	Q53H47	684 aa	Predicted RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	THOC7	Q6I9Y2	204 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	RGS7BP	Q6MZT1	257 aa	Predicted RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	SLC2A7	Q6PXP3	512 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	SYT10	Q6XYQ8	523 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	ARHGAP22	Q7Z5H3	698 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	TECPR1	Q7Z6L1	1165 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	KRT73	Q86Y46	540 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	TBC1D21	Q8IYX1	336 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	TXLNB	Q8N3L3	684 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	LRRC71	Q8N4P6	559 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	LSMEM1	Q8N8F7	131 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	CCDC150	Q8NCX0	1101 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	ZNF540	Q8NDQ6	660 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	PARD3B	Q8TEW8	1205 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	ARHGAP45	Q92619	1136 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	GLG1	Q92896	1179 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	PPP1R14B	Q96C90	147 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	GCC1	Q96CN9	775 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	RITA1	Q96K30	269 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	ZC3H10	Q96K80	434 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	PPP1R9B	Q96SB3	815 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	SMAD5	Q99717	465 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	DESI2	Q9BSY9	194 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	THUMPD2	Q9BTF0	503 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	TEX13B	Q9BXU2	312 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	TRIM4	Q9C037	500 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	SPRTN	Q9H040	489 aa	Predicted RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	GLT8D2	Q9H1C3	349 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	CD93	Q9NPY3	652 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	HOMER3	Q9NSC5	361 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	ZIM2	Q9NZV7	527 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	ZNF112	Q9UJU3	913 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	NDRG4	Q9ULP0	352 aa	Known RBP	4	□□□□□ -1.77
UBE2A-208	ENST00000628734	DUSP12	Q9UNI6	340 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	MED16	Q9Y2X0	877 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	TMED5	Q9Y3A6	229 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	ZNF711	Q9Y462	761 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	PEG3	Q9GZU2	1588 aa		4	□□□□□ -1.77
UBE2A-208	ENST00000628734	GOLGA6L4	A6NEF3	574 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	GOLGA6L10	A6NI86	522 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734		E5RJQ4	531 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	PRR23D1	E9PI22	279 aa	Predicted RBP	3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	NDC80	O14777	642 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	ZBTB43	O43298	467 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	AKAP10	O43572	662 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	PLOD3	O60568	738 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	BCAR3	O75815	825 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	MBD4	O95243	580 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	YEATS4	O95619	227 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	CAVIN2	O95810	425 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	BAG2	O95816	211 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	OLFM2	O95897	454 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	CSF1R	P07333	972 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	GRP	P07492	148 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	PRR23D2	P0DMB1	279 aa	Predicted RBP	3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	CAPN3	P20807	821 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	AKAP5	P24588	427 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	HOXD12	P35452	270 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	EPS15	P42566	896 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	ASMT	P46597	345 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	CCT4	P50991	539 aa	Known RBP	3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	GBE1	Q04446	702 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	KLHL30	Q0D2K2	578 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	E2F2	Q14209	437 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	OASL	Q15646	514 aa	Known RBP	3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	CCNG2	Q16589	344 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	KRTAP27-1	Q3LI81	207 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	CORO6	Q6QEF8	472 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	KDELC1	Q6UW63	502 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	NAPRT	Q6XQN6	538 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	ATG9A	Q7Z3C6	839 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	GRAMD2A	Q8IUY3	354 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	PNLDC1	Q8NA58	520 aa	Known RBP	3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	C7orf57	Q8NEG2	295 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	IPMK	Q8NFU5	416 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	CCDC110	Q8TBZ0	833 aa		3.99	□□□□□ -1.77
UBE2A-208	ENST00000628734	CDKL2	Q92772	493 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms