RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 IL1BP01584 269 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 MAT2AP31153 395 aaKnown RBP15.22■□□□□ 0.03
PNKP-218ENST00000625299 RGS7P49802 495 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 TBX4P57082 545 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 DAOAP59103 153 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 INSM1Q01101 510 aaPredicted RBP15.22■□□□□ 0.03
PNKP-218ENST00000625299 SFMBT2Q5VUG0 894 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 RNF219Q5W0B1 726 aaPredicted RBP15.22■□□□□ 0.03
PNKP-218ENST00000625299 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 PCSK4Q6UW60 755 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 ERICH1Q86X53 443 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 UNC45BQ8IWX7 931 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 CFAP52Q8N1V2 620 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 STK40Q8N2I9 435 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 FBXL13Q8NEE6 735 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 FIBINQ8TAL6 211 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 LMLNQ96KR4 655 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 ADAMTS1Q9UHI8 967 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 ERVW-1Q9UQF0 538 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 ATMQ13315 3056 aa15.22■□□□□ 0.03
PNKP-218ENST00000625299 EDDM13A0A1B0GTR0 161 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 ADH1BP00325 375 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 GOT1P17174 413 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 RPL13P26373 211 aaKnown RBP15.21■□□□□ 0.03
PNKP-218ENST00000625299 GTF2H1P32780 548 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 DAB2P98082 770 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 KCNH2Q12809 1159 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 ADAM9Q13443 819 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 FSCBQ5H9T9 825 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 PITRM1Q5JRX3 1037 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 NADSYN1Q6IA69 706 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 NAPEPLDQ6IQ20 393 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.21■□□□□ 0.03
PNKP-218ENST00000625299 SPATS2Q86XZ4 545 aaKnown RBP15.21■□□□□ 0.03
PNKP-218ENST00000625299 CCDC47Q96A33 483 aaKnown RBP15.21■□□□□ 0.03
PNKP-218ENST00000625299 MYEOVQ96EZ4 313 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 EEF2KMTQ96G04 330 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 RPL10LQ96L21 214 aaKnown RBP15.21■□□□□ 0.03
PNKP-218ENST00000625299 ERVMER34-1Q9H9K5 563 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 CNGB3Q9NQW8 809 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 SLCO3A1Q9UIG8 710 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 PCDHB1Q9Y5F3 818 aa15.21■□□□□ 0.03
PNKP-218ENST00000625299 DOCK9Q9BZ29 2069 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 TARSL2A2RTX5 802 aaKnown RBP15.2■□□□□ 0.02
PNKP-218ENST00000625299 K7ELQ4 463 aaPredicted RBP15.2■□□□□ 0.02
PNKP-218ENST00000625299 ERVH48-1M5A8F1 160 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 MOCS3O95396 460 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 MOCS2O96007 188 aaPredicted RBP15.2■□□□□ 0.02
PNKP-218ENST00000625299 MT-CO3P00414 261 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 IGLV3-27P01718 113 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 SETSIPP0DME0 302 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 C5AR1P21730 350 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 RXRGP48443 463 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 ENPEPQ07075 957 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 NFIL3Q16649 462 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 BROXQ5VW32 411 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 MSANTD2Q6P1R3 559 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 PRPF39Q86UA1 669 aaKnown RBP15.2■□□□□ 0.02
PNKP-218ENST00000625299 DCBLD1Q8N8Z6 715 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 ZNF248Q8NDW4 579 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 FAXDC2Q96IV6 333 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 FAM129BQ96TA1 746 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 DDX50Q9BQ39 737 aaKnown RBP15.2■□□□□ 0.02
PNKP-218ENST00000625299 NUCKS1Q9H1E3 243 aaKnown RBP15.2■□□□□ 0.02
PNKP-218ENST00000625299 CPNE5Q9HCH3 593 aa15.2■□□□□ 0.02
PNKP-218ENST00000625299 A0A1B0GVL5 298 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 PYCARD-AS1I3L0S3 204 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 SIGLEC6O43699 453 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 STX10O60499 249 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 RTN2O75298 545 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 MPOP05164 745 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 SRPRAP08240 638 aaKnown RBP15.19■□□□□ 0.02
PNKP-218ENST00000625299 PFKFB1P16118 471 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 ACP1P24666 158 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 MZF1P28698 734 aaPredicted RBP15.19■□□□□ 0.02
PNKP-218ENST00000625299 STK19P49842 368 aaPredicted RBP15.19■□□□□ 0.02
PNKP-218ENST00000625299 METAP1P53582 386 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 PCBP4P57723 403 aaKnown RBP15.19■□□□□ 0.02
PNKP-218ENST00000625299 ECT2LQ008S8 904 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 CUL2Q13617 745 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 ARID5BQ14865 1188 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 PROX2Q3B8N5 592 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 POM121L1PQ3SYA9 428 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 HS1BP3Q53T59 392 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 DCAF17Q5H9S7 520 aaPredicted RBP15.19■□□□□ 0.02
PNKP-218ENST00000625299 ARHGAP40Q5TG30 622 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 TCERG1LQ5VWI1 586 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 KANSL1Q7Z3B3 1105 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 MFSD2AQ8NA29 543 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 KDM1BQ8NB78 822 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 CLEC4CQ8WTT0 213 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 KCTD13Q8WZ19 329 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 RFFLQ8WZ73 363 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 IRX2Q9BZI1 471 aaPredicted RBP15.19■□□□□ 0.02
PNKP-218ENST00000625299 CA5BQ9Y2D0 317 aa15.19■□□□□ 0.02
PNKP-218ENST00000625299 ITIH6Q6UXX5 1313 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 MAST4O15021 2626 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 CAPN8A6NHC0 703 aa15.18■□□□□ 0.02
PNKP-218ENST00000625299 O00370 1275 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms