RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 PAXBP1Q9Y5B6 917 aa26.02■■□□□ 1.76
VEGFA-228ENST00000617771 RNASEH1O60930 286 aaKnown RBP26.01■■□□□ 1.75
VEGFA-228ENST00000617771 GFPT2O94808 682 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 MAOBP27338 520 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 KLK7P49862 253 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 SULT1E1P49888 294 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 NOVA1P51513 510 aaKnown RBP26.01■■□□□ 1.75
VEGFA-228ENST00000617771 COPB1P53618 953 aaKnown RBP26.01■■□□□ 1.75
VEGFA-228ENST00000617771 AUHQ13825 339 aaKnown RBP26.01■■□□□ 1.75
VEGFA-228ENST00000617771 ARID5BQ14865 1188 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 BRMS1LQ5PSV4 323 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 DCAF12L1Q5VU92 463 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 PSAPL1Q6NUJ1 521 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 FBXL22Q6P050 247 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 CIR1Q86X95 450 aaPredicted RBP26.01■■□□□ 1.75
VEGFA-228ENST00000617771 SPAG5Q96R06 1193 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 FSCN3Q9NQT6 498 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 HS3ST4Q9Y661 456 aa26.01■■□□□ 1.75
VEGFA-228ENST00000617771 METTL12A8MUP2 240 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 ARHGAP33O14559 1287 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 PAGE1O75459 146 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 F9P00740 461 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 PDGFRAP16234 1089 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 CSRP1P21291 193 aaKnown RBP26■■□□□ 1.75
VEGFA-228ENST00000617771 SULT2A1Q06520 285 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 N4BP2L1Q5TBK1 243 aaPredicted RBP26■■□□□ 1.75
VEGFA-228ENST00000617771 SH3PXD2AQ5TCZ1 1133 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 DHX40Q8IX18 779 aaKnown RBP26■■□□□ 1.75
VEGFA-228ENST00000617771 APCDD1Q8J025 514 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 HDDC3Q8N4P3 179 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 PGAP3Q96FM1 320 aaPredicted RBP26■■□□□ 1.75
VEGFA-228ENST00000617771 PCMTD1Q96MG8 357 aaPredicted RBP26■■□□□ 1.75
VEGFA-228ENST00000617771 PPP1R9BQ96SB3 815 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 BTBD1Q9H0C5 482 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 RSPH9Q9H1X1 276 aaPredicted RBP26■■□□□ 1.75
VEGFA-228ENST00000617771 WDCPQ9H6R7 721 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 NLRC4Q9NPP4 1024 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 PIGVQ9NUD9 493 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 LIMA1Q9UHB6 759 aaKnown RBP26■■□□□ 1.75
VEGFA-228ENST00000617771 VANGL2Q9ULK5 521 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 SCML1Q9UN30 329 aa26■■□□□ 1.75
VEGFA-228ENST00000617771 ITIH6Q6UXX5 1313 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 EDDM13A0A1B0GTR0 161 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 A0A1B0GTW7 788 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 TARSL2A2RTX5 802 aaKnown RBP25.99■■□□□ 1.75
VEGFA-228ENST00000617771 SIN3BO75182 1162 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 CDK11BP21127 795 aaKnown RBP25.99■■□□□ 1.75
VEGFA-228ENST00000617771 SOX5P35711 763 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 NNMTP40261 264 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 CTSOP43234 321 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-228ENST00000617771 CXCR3P49682 368 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 JAM2P57087 298 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 NOMO3P69849 1222 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 DEUP1Q05D60 604 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 SFSWAPQ12872 951 aaKnown RBP25.99■■□□□ 1.75
VEGFA-228ENST00000617771 SLC25A52Q3SY17 297 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 OTUD1Q5VV17 481 aaPredicted RBP25.99■■□□□ 1.75
VEGFA-228ENST00000617771 NAA35Q5VZE5 725 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 CPA5Q8WXQ8 436 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 IGSF8Q969P0 613 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 NT5C3BQ969T7 300 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 TKTL2Q9H0I9 626 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 MIR1-1HGQ9H1L0 117 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 MTG2Q9H4K7 406 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 ARHGEF38Q9NXL2 777 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 SIK3Q9Y2K2 1263 aa25.99■■□□□ 1.75
VEGFA-228ENST00000617771 LGALS16A8MUM7 142 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 GOLGA8SH3BPF8 625 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 OPHN1O60890 802 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 STAT1P42224 750 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 PLK1P53350 603 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 CDR2Q01850 454 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 CENPCQ03188 943 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 SYCP1Q15431 976 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 MINDY1Q8N5J2 469 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 NEK11Q8NG66 645 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 SLC20A1Q8WUM9 679 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 SIK2Q9H0K1 926 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 SGK2Q9HBY8 427 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 NOCTQ9UK39 431 aaKnown RBP25.98■■□□□ 1.75
VEGFA-228ENST00000617771 NCKAP1Q9Y2A7 1128 aa25.98■■□□□ 1.75
VEGFA-228ENST00000617771 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.97■■□□□ 1.75
VEGFA-228ENST00000617771 FAM170AA1A519 330 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 TTC34A8MYJ7 566 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 EPHB6O15197 1021 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 CLDN11O75508 207 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 SEMA4FO95754 770 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 CEACAM1P13688 526 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 TFE3P19532 575 aaPredicted RBP25.97■■□□□ 1.75
VEGFA-228ENST00000617771 MZF1P28698 734 aaPredicted RBP25.97■■□□□ 1.75
VEGFA-228ENST00000617771 ACSL1P33121 698 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 ZNF177Q13360 481 aaPredicted RBP25.97■■□□□ 1.75
VEGFA-228ENST00000617771 C2CD6Q53TS8 623 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 C9orf64Q5T6V5 341 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 ACBD5Q5T8D3 534 aaPredicted RBP25.97■■□□□ 1.75
VEGFA-228ENST00000617771 CXorf57Q6NSI4 855 aaKnown RBP25.97■■□□□ 1.75
VEGFA-228ENST00000617771 ZCCHC9Q8N567 271 aaKnown RBP25.97■■□□□ 1.75
VEGFA-228ENST00000617771 RPL10LQ96L21 214 aaKnown RBP25.97■■□□□ 1.75
VEGFA-228ENST00000617771 TBCBQ99426 244 aa25.97■■□□□ 1.75
VEGFA-228ENST00000617771 ADAM33Q9BZ11 813 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms