RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 PRRX2Q99811 253 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 CIPCQ9C0C6 399 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 ZYG11BQ9C0D3 744 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 GPATCH2LQ9NWQ4 482 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 INTS6Q9UL03 887 aaKnown RBP17.11■□□□□ 0.33
IRF1-211ENST00000613424 USP18Q9UMW8 372 aa17.11■□□□□ 0.33
IRF1-211ENST00000613424 MYO18AQ92614 2054 aaKnown RBP17.11■□□□□ 0.33
IRF1-211ENST00000613424 PROSCO94903 275 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 HNRNPLP14866 589 aaKnown RBP eCLIP17.1■□□□□ 0.33
IRF1-211ENST00000613424 TCF4P15884 667 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 POLR2EP19388 210 aaKnown RBP17.1■□□□□ 0.33
IRF1-211ENST00000613424 IL1R2P27930 398 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 L1CAMP32004 1257 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 EIF4HQ15056 248 aaKnown RBP17.1■□□□□ 0.33
IRF1-211ENST00000613424 TCEAL1Q15170 157 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 CA9Q16790 459 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 FUT11Q495W5 492 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 HSF5Q4G112 596 aaPredicted RBP17.1■□□□□ 0.33
IRF1-211ENST00000613424 MBLAC2Q68D91 279 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 RWDD4Q6NW29 188 aaKnown RBP17.1■□□□□ 0.33
IRF1-211ENST00000613424 SYT13Q7L8C5 426 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 RHOT2Q8IXI1 618 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 PRSS33Q8NF86 280 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 OR52K2Q8NGK3 314 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 UCMAQ8WVF2 138 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 SORCS1Q8WY21 1168 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 RFFLQ8WZ73 363 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 ACDQ96AP0 544 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 ACOX2Q99424 681 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 SNRNP25Q9BV90 132 aaKnown RBP17.1■□□□□ 0.33
IRF1-211ENST00000613424 LUC7LQ9NQ29 371 aaKnown RBP17.1■□□□□ 0.33
IRF1-211ENST00000613424 MMP17Q9ULZ9 603 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 TFR2Q9UP52 801 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 AP4E1Q9UPM8 1137 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 TBC1D30Q9Y2I9 924 aa17.1■□□□□ 0.33
IRF1-211ENST00000613424 SGK1O00141 431 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 CREB3O43889 395 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 ADAM23O75077 832 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 MTA2O94776 668 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 MZF1P28698 734 aaPredicted RBP17.09■□□□□ 0.33
IRF1-211ENST00000613424 CSKP41240 450 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 WASP42768 502 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 MRE11P49959 708 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 OXCT1P55809 520 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 CSTF1Q05048 431 aaKnown RBP17.09■□□□□ 0.33
IRF1-211ENST00000613424 TCF15Q12870 199 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 SEMA3BQ13214 749 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 SLC12A1Q13621 1099 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 DMC1Q14565 340 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 BOLA3Q53S33 107 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 PITRM1Q5JRX3 1037 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 EOGTQ5NDL2 527 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 TSSK4Q6SA08 328 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 TRMT11Q7Z4G4 463 aaKnown RBP17.09■□□□□ 0.33
IRF1-211ENST00000613424 TFAP2DQ7Z6R9 452 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 CPNE8Q86YQ8 564 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 APCDD1Q8J025 514 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 TTC17Q96AE7 1141 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 TBC1D31Q96DN5 1066 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 ALG14Q96F25 216 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 KCNH6Q9H252 994 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 DHX35Q9H5Z1 703 aaKnown RBP17.09■□□□□ 0.33
IRF1-211ENST00000613424 PRMT8Q9NR22 394 aaPredicted RBP17.09■□□□□ 0.33
IRF1-211ENST00000613424 THAP10Q9P2Z0 257 aaPredicted RBP17.09■□□□□ 0.33
IRF1-211ENST00000613424 ZNF212Q9UDV6 495 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 LCMT1Q9UIC8 334 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 FBXO4Q9UKT5 387 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 SLC8A2Q9UPR5 921 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 NEU3Q9UQ49 428 aa17.09■□□□□ 0.33
IRF1-211ENST00000613424 REXO2Q9Y3B8 237 aaKnown RBP17.09■□□□□ 0.33
IRF1-211ENST00000613424 DOCK4Q8N1I0 1966 aa17.08■□□□□ 0.33
IRF1-211ENST00000613424 WASH3PC4AMC7 463 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 K7ESF4 209 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 PAPSS2O95340 614 aaPredicted RBP17.08■□□□□ 0.32
IRF1-211ENST00000613424 IPO7O95373 1038 aaKnown RBP17.08■□□□□ 0.32
IRF1-211ENST00000613424 MOCS3O95396 460 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 RHOQP17081 205 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 OR1E1P30953 314 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 NTSR1P30989 418 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 HOXC13P31276 330 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 ARHGAP25P42331 645 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 PLK1P53350 603 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 SLC25A11Q02978 314 aaKnown RBP17.08■□□□□ 0.32
IRF1-211ENST00000613424 MESDQ14696 234 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 PLEKHG6Q3KR16 790 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 KCNT1Q5JUK3 1230 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 TXNRD3NBQ6F5E7 133 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 SDE2Q6IQ49 451 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 TMEM92Q6UXU6 159 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 SETD3Q86TU7 594 aaPredicted RBP17.08■□□□□ 0.32
IRF1-211ENST00000613424 NLRP14Q86W24 1093 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 PSTKQ8IV42 348 aaKnown RBP17.08■□□□□ 0.32
IRF1-211ENST00000613424 CHPFQ8IZ52 775 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 ACRBPQ8NEB7 543 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 CYB5D2Q8WUJ1 264 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 EPAS1Q99814 870 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 FEM1AQ9BSK4 669 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 RETREG1Q9H6L5 497 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 ZWILCHQ9H900 591 aa17.08■□□□□ 0.32
IRF1-211ENST00000613424 CACNA2D2Q9NY47 1150 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms