RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 FSCBQ5H9T9 825 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 PITRM1Q5JRX3 1037 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 BRMS1LQ5PSV4 323 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 TRNP1Q6NT89 227 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 FBXL22Q6P050 247 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 UNQ6494/PRO21346Q6UXR6 183 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 LPCAT2Q7L5N7 544 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 ARCQ7LC44 396 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 CCAR2Q8N163 923 aaKnown RBP15.6■□□□□ 0.09
TRIM28-205ENST00000595028 TTC17Q96AE7 1141 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 PCDHB18PQ96TA0 734 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 TBCBQ99426 244 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 SMOC1Q9H4F8 434 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 PRDM16Q9HAZ2 1276 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 CD93Q9NPY3 652 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 METTL5Q9NRN9 209 aaKnown RBP15.6■□□□□ 0.09
TRIM28-205ENST00000595028 ARHGEF38Q9NXL2 777 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 TMEM59LQ9UK28 342 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 INTS6Q9UL03 887 aaKnown RBP15.6■□□□□ 0.09
TRIM28-205ENST00000595028 PLA2G4CQ9UP65 541 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 HS3ST4Q9Y661 456 aa15.6■□□□□ 0.09
TRIM28-205ENST00000595028 DOCK4Q8N1I0 1966 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 A0A1B0GTH6 734 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 ADCY5O95622 1261 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 CAVIN2O95810 425 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 FERP16591 822 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 GGCXP38435 758 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 NSFP46459 744 aaKnown RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 GSCP56915 257 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 RPL6Q02878 288 aaKnown RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 DEUP1Q05D60 604 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 CAMK2GQ13555 558 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 AUHQ13825 339 aaKnown RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 CLEC16AQ2KHT3 1053 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 PLEKHG6Q3KR16 790 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 FILIP1LQ4L180 1135 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 SPDYCQ5MJ68 293 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 SLC36A4Q6YBV0 504 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 SND1Q7KZF4 910 aaKnown RBP eCLIP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 ARMCX6Q7L4S7 300 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 BNIPLQ7Z465 357 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 METTL3Q86U44 580 aaKnown RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 CIR1Q86X95 450 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 TMEFF1Q8IYR6 380 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 ZNF366Q8N895 744 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 C12orf50Q8NA57 414 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 OR2T3Q8NH03 318 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 SLC30A5Q8TAD4 765 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 RPRD1AQ96P16 312 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 TKTL2Q9H0I9 626 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 CBX8Q9HC52 389 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 ANLNQ9NQW6 1124 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 TMEM51Q9NW97 253 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 KIAA1522Q9P206 1035 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-205ENST00000595028 VANGL2Q9ULK5 521 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 MYO6Q9UM54 1294 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 PAXBP1Q9Y5B6 917 aa15.59■□□□□ 0.09
TRIM28-205ENST00000595028 ITPR1Q14643 2758 aa15.58■□□□□ 0.09
TRIM28-205ENST00000595028 A0A1W2PQC6 194 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 I6L893 689 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-205ENST00000595028 AP5Z1O43299 807 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 MOCS3O95396 460 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 F9P00740 461 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 RDXP35241 583 aaKnown RBP15.58■□□□□ 0.08
TRIM28-205ENST00000595028 PTGER3P43115 390 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 IRAK1P51617 712 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 PTP4A2Q12974 167 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 LYSMD4Q5XG99 296 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 TCEAL6Q6IPX3 200 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 CACUL1Q86Y37 369 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 PHF13Q86YI8 300 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-205ENST00000595028 TMPRSS6Q8IU80 811 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 EMC1Q8N766 993 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 KDF1Q8NAX2 398 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-205ENST00000595028 BAP1Q92560 729 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 TCEAL3Q969E4 200 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 IGSF8Q969P0 613 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 SIPA1Q96FS4 1042 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 MYO19Q96H55 970 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 CFAP57Q96MR6 1250 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 WDCPQ9H6R7 721 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 FBRSQ9HAH7 460 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 RXFP3Q9NSD7 469 aa15.58■□□□□ 0.08
TRIM28-205ENST00000595028 SEPT11Q9NVA2 429 aaKnown RBP15.58■□□□□ 0.08
TRIM28-205ENST00000595028 USP36Q9P275 1121 aaKnown RBP15.58■□□□□ 0.08
TRIM28-205ENST00000595028 KCNK5O95279 499 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 CCDC172P0C7W6 258 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 C7P10643 843 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 ST8SIA6P61647 398 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 NUMA1Q14980 2115 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 C5orf22Q49AR2 442 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 CXorf57Q6NSI4 855 aaKnown RBP15.57■□□□□ 0.08
TRIM28-205ENST00000595028 MON1BQ7L1V2 547 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 C14orf80Q86SX3 495 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 LUZP1Q86V48 1076 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 KDM1BQ8NB78 822 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 PRCCQ92733 491 aaPredicted RBP15.57■□□□□ 0.08
TRIM28-205ENST00000595028 MRGPRX3Q96LB0 322 aa15.57■□□□□ 0.08
TRIM28-205ENST00000595028 NAP1L5Q96NT1 182 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms