RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 CDH4P55283 916 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
PTBP1-216ENST00000590887 SMAD3P84022 425 aaKnown RBP13.34□□□□□ -0.27
PTBP1-216ENST00000590887 CDK16Q00536 496 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 DHX9Q08211 1270 aaKnown RBP13.34□□□□□ -0.27
PTBP1-216ENST00000590887 PRPSAP1Q14558 356 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 PRKD1Q15139 912 aaPredicted RBP13.34□□□□□ -0.27
PTBP1-216ENST00000590887 C5orf22Q49AR2 442 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 HSP90B2PQ58FF3 399 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 C6orf118Q5T5N4 469 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 TMCO4Q5TGY1 634 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 PIK3R6Q5UE93 754 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 RAP1GAP2Q684P5 730 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 HIBCHQ6NVY1 386 aaPredicted RBP13.34□□□□□ -0.27
PTBP1-216ENST00000590887 CENPUQ71F23 418 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 TRMT10CQ7L0Y3 403 aaKnown RBP13.34□□□□□ -0.27
PTBP1-216ENST00000590887 UMODL1-AS1Q8N2C9 162 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 FBXO25Q8TCJ0 367 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 ARNTL2Q8WYA1 636 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 EXOC4Q96A65 974 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 TSGA13Q96PP4 275 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 TASP1Q9H6P5 420 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 IL21Q9HBE4 155 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 USP29Q9HBJ7 922 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 ZDHHC18Q9NUE0 388 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 ETNK2Q9NVF9 386 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 GRHL1Q9NZI5 618 aa13.34□□□□□ -0.27
PTBP1-216ENST00000590887 ANAPC1Q9H1A4 1944 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 CDH23Q9H251 3354 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 A0A0A0MRY4 1105 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 OPA1O60313 960 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 OR1E1P30953 314 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 OXCT1P55809 520 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 ARL4CP56559 192 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 SLC10A2Q12908 348 aaPredicted RBP13.33□□□□□ -0.28
PTBP1-216ENST00000590887 DUSP6Q16828 381 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 PARP6Q2NL67 630 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 PARP15Q460N3 678 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 FBXL22Q6P050 247 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 CHST9Q7L1S5 443 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 DENND1CQ8IV53 801 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 TDHQ8IZJ6 230 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 LGI2Q8N0V4 545 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 ZCCHC9Q8N567 271 aaKnown RBP13.33□□□□□ -0.28
PTBP1-216ENST00000590887 KIAA1958Q8N8K9 716 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 ZNF557Q8N988 423 aaPredicted RBP13.33□□□□□ -0.28
PTBP1-216ENST00000590887 FATE1Q969F0 183 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 P2RY11Q96G91 374 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 SPATA13Q96N96 652 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 TTC25Q96NG3 672 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 PRMT1Q99873 361 aaKnown RBP13.33□□□□□ -0.28
PTBP1-216ENST00000590887 LRRC3Q9BY71 257 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 MAGEB5Q9BZ81 275 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 SFXN1Q9H9B4 322 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 ZNF334Q9HCZ1 680 aaPredicted RBP13.33□□□□□ -0.28
PTBP1-216ENST00000590887 KLHL8Q9P2G9 620 aaPredicted RBP13.33□□□□□ -0.28
PTBP1-216ENST00000590887 STOML2Q9UJZ1 356 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 YBX2Q9Y2T7 364 aaKnown RBP13.33□□□□□ -0.28
PTBP1-216ENST00000590887 DENND4CQ5VZ89 1909 aa13.33□□□□□ -0.28
PTBP1-216ENST00000590887 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 CCDC195A0A1B0GUA6 201 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 A0A1W2PRU2 124 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 C2orf78A6NCI8 922 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 GOLGA6L10A6NI86 522 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ERI2A8K979 691 aaKnown RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 I6L893 689 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 DFFAO00273 331 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 MAP2K7O14733 419 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 RAMP2O60895 175 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 PPFIA2O75334 1257 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 CYBBP04839 570 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 MYBL2P10244 700 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 IVDP26440 423 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 IRS1P35568 1242 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 RENBPP51606 427 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 KCNQ1P51787 676 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 PMS2P54278 862 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 EIF3BP55884 814 aaKnown RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 RBM10P98175 930 aaKnown RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ZNF177Q13360 481 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 CAMK1Q14012 370 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 POLD3Q15054 466 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ANKRD20A2Q5SQ80 823 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 GPR158Q5T848 1215 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 RNASEH2BQ5TBB1 312 aaKnown RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ANKRD20A1Q5TYW2 823 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ANKRD20A3Q5VUR7 823 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 TXNDC8Q6A555 127 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 GPR153Q6NV75 609 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ZDHHC24Q6UX98 284 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ZNF783Q6ZMS7 281 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 PID1Q7Z2X4 250 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 TMEM150AQ86TG1 271 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 SETD3Q86TU7 594 aaPredicted RBP13.32□□□□□ -0.28
PTBP1-216ENST00000590887 ZNF354CQ86Y25 554 aa13.32□□□□□ -0.28
PTBP1-216ENST00000590887 HS6ST3Q8IZP7 471 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms