RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 KLHL5Q96PQ7 755 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 RBM15Q96T37 977 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCBE1-203ENST00000589116 LGMNQ99538 433 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 TCF25Q9BQ70 676 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 NACA2Q9H009 215 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 SEMA4AQ9H3S1 761 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 ENTPD7Q9NQZ7 604 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 RAB6BQ9NRW1 208 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 XPO7Q9UIA9 1087 aaKnown RBP12.4□□□□□ -0.42
CCBE1-203ENST00000589116 NFS1Q9Y697 457 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 OBSL1O75147 1896 aa12.4□□□□□ -0.42
CCBE1-203ENST00000589116 GOLGA6L10A6NI86 522 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 GOLGA8KD6RF30 607 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 COCHO43405 550 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 TTC4O95801 387 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 OAS1P00973 400 aaKnown RBP12.39□□□□□ -0.43
CCBE1-203ENST00000589116 RB1P06400 928 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 RHOQP17081 205 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 FDFT1P37268 417 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 NRLP54845 237 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 ARL4CP56559 192 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 CBLBQ13191 982 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
CCBE1-203ENST00000589116 LRRC49Q8IUZ0 686 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 ZNF683Q8IZ20 524 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 RTL3Q8N8U3 475 aaKnown RBP12.39□□□□□ -0.43
CCBE1-203ENST00000589116 CCDC110Q8TBZ0 833 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 VAT1Q99536 393 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 ZYG11BQ9C0D3 744 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 RETREG1Q9H6L5 497 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 TLR9Q9NR96 1032 aa12.39□□□□□ -0.43
CCBE1-203ENST00000589116 MTCL1Q9Y4B5 1905 aaKnown RBP12.39□□□□□ -0.43
CCBE1-203ENST00000589116 E7ESA3 106 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 RNF103O00237 685 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 TMEM63AO94886 807 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 GLUD1P00367 558 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 LRG1P02750 347 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 TPSB2P20231 275 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 SEMA5AQ13591 1074 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 AUHQ13825 339 aaKnown RBP12.38□□□□□ -0.43
CCBE1-203ENST00000589116 SLC29A2Q14542 456 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 TPSAB1Q15661 275 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ANKRD20A2Q5SQ80 823 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 CEP85LQ5SZL2 805 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ANKRD20A1Q5TYW2 823 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ANKRD20A3Q5VUR7 823 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ANKRD22Q5VYY1 191 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 C14orf80Q86SX3 495 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 NLRP14Q86W24 1093 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 PDIK1LQ8N165 341 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 MRPL43Q8N983 215 aaKnown RBP12.38□□□□□ -0.43
CCBE1-203ENST00000589116 SPPL3Q8TCT6 385 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 POF1BQ8WVV4 589 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 SAMD11Q96NU1 681 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 TSGA13Q96PP4 275 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 PRMT1Q99873 361 aaKnown RBP12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ZNF576Q9H609 170 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 TMEM248Q9NWD8 314 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 DENND4CQ5VZ89 1909 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 C2orf71A6NGG8 1288 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 LPXNO60711 386 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 F11P03951 625 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 C8AP07357 584 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 HMBSP08397 361 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ABHD2P08910 425 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 MAGEA4P43358 317 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 HARS2P49590 506 aaKnown RBP12.38□□□□□ -0.43
CCBE1-203ENST00000589116 NDST2P52849 883 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ERVFC1P60507 584 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 CDK16Q00536 496 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ZNF844Q08AG5 666 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 IFFO1Q0D2I5 559 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 WASHC5Q12768 1159 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 AFMIDQ63HM1 303 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ARHGAP12Q8IWW6 846 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 CCDC13Q8IYE1 715 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 UMODL1-AS1Q8N2C9 162 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ELMOD1Q8N336 334 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 CCDC33Q8N5R6 958 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 KREMEN2Q8NCW0 462 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 MCUQ8NE86 351 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 LRFN3Q9BTN0 628 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 TMEM109Q9BVC6 243 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ETNK1Q9HBU6 452 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
CCBE1-203ENST00000589116 SAYSD1Q9NPB0 183 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 EIF2B3Q9NR50 452 aaKnown RBP12.38□□□□□ -0.43
CCBE1-203ENST00000589116 NINJ2Q9NZG7 142 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 IGSF9Q9P2J2 1179 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 TRHDEQ9UKU6 1024 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 VANGL2Q9ULK5 521 aa12.38□□□□□ -0.43
CCBE1-203ENST00000589116 NUP205Q92621 2012 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 DRGXA6NNA5 263 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 ALOX15BO15296 676 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 ACSL4O60488 711 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 RNF40O75150 1001 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 LATS1O95835 1130 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 OLFM2O95897 454 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms