RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 ATMQ13315 3056 aa22.59■■□□□ 1.21
CAPNS1-205ENST00000588780 MOCS3O95396 460 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 TRIM49P0CI25 452 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 TRIM49CP0CI26 452 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 ADIGQ0VDE8 80 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 GOLGA7BQ2TAP0 167 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 PM20D1Q6GTS8 502 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 UNC45BQ8IWX7 931 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 ANKRD52Q8NB46 1076 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 HJURPQ8NCD3 748 aaPredicted RBP22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 FIBINQ8TAL6 211 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 TTC9Q92623 222 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 VCPIP1Q96JH7 1222 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 DPH1Q9BZG8 443 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 POLR1BQ9H9Y6 1135 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 EXOC1Q9NV70 894 aa22.58■■□□□ 1.21
CAPNS1-205ENST00000588780 IRAK2O43187 625 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 OPA1O60313 960 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 CSO75390 466 aaKnown RBP22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 KRT13P13646 458 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 LSSP48449 732 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 NASPP49321 788 aaPredicted RBP22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 ERVPABLB-1P60509 514 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 POM121L1PQ3SYA9 428 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 C8orf34Q49A92 452 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 C1orf220Q5T0J3 134 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 KIAA1614Q5VZ46 1190 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 SLC4A11Q8NBS3 891 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 LINC00301Q8NCQ3 95 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 MRGPRX3Q96LB0 322 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 FAM117AQ9C073 453 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 UPF2Q9HAU5 1272 aaKnown RBP22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 ABCC13Q9NSE7 274 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 HESX1Q9UBX0 185 aa22.57■■□□□ 1.2
CAPNS1-205ENST00000588780 YJEFN3A6XGL0 299 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 E7ENQ6 273 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 TULP2O00295 520 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 ACSL4O60488 711 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 SLC6A4P31645 630 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 CTSOP43234 321 aaPredicted RBP22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 OVGP1Q12889 678 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 NUGGCQ68CJ6 796 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 IQCHQ86VS3 1027 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 TTC39CQ8N584 583 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 TATDN2Q93075 761 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 KLHDC7BQ96G42 594 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 FAM129BQ96TA1 746 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 DDX50Q9BQ39 737 aaKnown RBP22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 ZSCAN16Q9H4T2 348 aaPredicted RBP22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 CISHQ9NSE2 258 aa22.56■■□□□ 1.2
CAPNS1-205ENST00000588780 PDXKO00764 312 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 LATO43561 262 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 CALUO43852 315 aaPredicted RBP22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 CUTAO60888 179 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 SRPRAP08240 638 aaKnown RBP22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 PDIA4P13667 645 aaKnown RBP22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 RBMS1P29558 406 aaKnown RBP22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 NNMTP40261 264 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 RAD23BP54727 409 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 STK4Q13043 487 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 PITRM1Q5JRX3 1037 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 ARHGAP17Q68EM7 881 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 SHC4Q6S5L8 630 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 MMS22LQ6ZRQ5 1243 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 BHLHA9Q7RTU4 235 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 GRAMD1CQ8IYS0 662 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 SLC25A45Q8N413 288 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 KDM1BQ8NB78 822 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 RPL10LQ96L21 214 aaKnown RBP22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 TRIM4Q9C037 500 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 CYTH4Q9UIA0 394 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 SLCO3A1Q9UIG8 710 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 INTS6Q9UL03 887 aaKnown RBP22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 DMTF1Q9Y222 760 aa22.55■■□□□ 1.2
CAPNS1-205ENST00000588780 XPO1O14980 1071 aaKnown RBP22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 PPP6R2O75170 966 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 RTN2O75298 545 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 DXOO77932 396 aaKnown RBP22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 ALPPL2P10696 532 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 LCP1P13796 627 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 MZF1P28698 734 aaPredicted RBP22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 CSRP3P50461 194 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 TBX4P57082 545 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 RPS24P62847 133 aaKnown RBP22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 ECT2LQ008S8 904 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 PPP3CAQ08209 521 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 FAM133BQ5BKY9 247 aaKnown RBP22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 C3orf38Q5JPI3 329 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 CEP57L1Q8IYX8 460 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 OR4C6Q8NH72 309 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 MYOCQ99972 504 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 IRX2Q9BZI1 471 aaPredicted RBP22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 KCTD10Q9H3F6 313 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 FAM13BQ9NYF5 915 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 CA5BQ9Y2D0 317 aa22.54■■□□□ 1.2
CAPNS1-205ENST00000588780 A0A1B0GVM2 712 aa22.53■■□□□ 1.2
CAPNS1-205ENST00000588780 CD19P15391 556 aa22.53■■□□□ 1.2
CAPNS1-205ENST00000588780 DGKAP23743 735 aa22.53■■□□□ 1.2
CAPNS1-205ENST00000588780 NUDT1P36639 197 aa22.53■■□□□ 1.2
CAPNS1-205ENST00000588780 NUMBP49757 651 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms