RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 MOSPD1Q9UJG1 213 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 TTC37Q6PGP7 1564 aa6.31□□□□□ -1.4
SMAD4-203ENST00000585448 NEO1Q92859 1461 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 A0A0U1RQJ8 604 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 A0A1W2PQ67 120 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FAM172BPA6NC97 362 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CCDC160A6NGH7 325 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 MIF4GDA9UHW6 222 aaKnown RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CES2O00748 559 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CAPN9O14815 690 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 BET1O15155 118 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PLSCR1O15162 318 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 NOBOXO60393 691 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 RSL1D1O76021 490 aaKnown RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 DDHD2O94830 711 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 KLHL18O94889 574 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CLPTM1O96005 669 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PAHP00439 452 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 A1BGP04217 495 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 UQCRBP14927 111 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CPA1P15085 419 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PFKFB1P16118 471 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CD53P19397 219 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ADSLP30566 484 aaPredicted RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PTGS2P35354 604 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 HSD17B2P37059 387 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 HAAOP46952 286 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PLCD1P51178 756 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 P2RX3P56373 397 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CDR2Q01850 454 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 SP140Q13342 867 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 NECTIN1Q15223 517 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PCBP1Q15365 356 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF174Q15697 407 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FAM153CQ494X1 144 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 GPR158Q5T848 1215 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 C6orf163Q5TEZ5 329 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PPP4R4Q6NUP7 873 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 KRT26Q7Z3Y9 468 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FRMD5Q7Z6J6 570 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ADAMTSL2Q86TH1 951 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 RTN4RL1Q86UN2 441 aaPredicted RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 SATL1Q86VE3 508 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ZZZ3Q8IYH5 903 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 SCYL3Q8IZE3 742 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CENPSQ8N2Z9 138 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 AFAP1L2Q8N4X5 818 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FITM2Q8N6M3 262 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 SLC17A8Q8NDX2 589 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 TTC8Q8TAM2 541 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 CASKIN2Q8WXE0 1202 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ARHGEF2Q92974 986 aaKnown RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FAM149B1Q96BN6 582 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF274Q96GC6 653 aaPredicted RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ZSWIM3Q96MP5 696 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 BTBD9Q96Q07 612 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FOXB1Q99853 325 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 SELENOSQ9BQE4 189 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FERMT1Q9BQL6 677 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 TBC1D10AQ9BXI6 508 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 IFIH1Q9BYX4 1025 aaKnown RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 KATNBL1Q9H079 304 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 XYLT2Q9H1B5 865 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ZHX3Q9H4I2 956 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 NEK6Q9HC98 313 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PARD6AQ9NPB6 346 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF277Q9NRM2 450 aaPredicted RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 TRNAU1APQ9NX07 287 aaKnown RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 RRN3Q9NYV6 651 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 KIF17Q9P2E2 1029 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FAM153AQ9UHL3 310 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 FBXO10Q9UK96 956 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 PCDHA12Q9UN75 941 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 SLC45A1Q9Y2W3 748 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 MYH15Q9Y2K3 1946 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 GLI2P10070 1586 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 ARID1BQ8NFD5 2236 aaPredicted RBP6.3□□□□□ -1.4
SMAD4-203ENST00000585448 MAGI3Q5TCQ9 1506 aa6.3□□□□□ -1.4
SMAD4-203ENST00000585448 MROH7-TTC4A0A0A0MT08 1334 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 A0A1B0GTL3 188 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 GTPBP10A4D1E9 387 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ZSCAN5BA6NJL1 495 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 SMIM23A6NLE4 172 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 GOLGA8JA6NMD2 632 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 H3BNX3 289 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 ZNF701M0R085 212 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 POLR1CO15160 346 aaPredicted RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 NCAM2O15394 837 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 CCNT1O60563 726 aaKnown RBP6.29□□□□□ -1.4
SMAD4-203ENST00000585448 CCDC22O60826 627 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 PPP6R2O75170 966 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 FKBP6O75344 327 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 OR5F1O95221 314 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 PRLP01236 227 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 GYPCP04921 128 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 NUDT17P0C025 328 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 KRT5P13647 590 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 GM2AP17900 193 aa6.29□□□□□ -1.4
SMAD4-203ENST00000585448 IL10P22301 178 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms