RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 TMA16Q96EY4 203 aaKnown RBP12.35□□□□□ -0.43
CCDC57-216ENST00000582885 PRICKLE1Q96MT3 831 aaPredicted RBP12.35□□□□□ -0.43
CCDC57-216ENST00000582885 OLFM3Q96PB7 478 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 BRD8Q9H0E9 1235 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 RBM12Q9NTZ6 932 aaKnown RBP12.35□□□□□ -0.43
CCDC57-216ENST00000582885 ETNK2Q9NVF9 386 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 DTLQ9NZJ0 730 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 MPP6Q9NZW5 540 aa12.35□□□□□ -0.43
CCDC57-216ENST00000582885 FEZ2Q9UHY8 353 aaPredicted RBP12.35□□□□□ -0.43
CCDC57-216ENST00000582885 R3HDM2Q9Y2K5 976 aaKnown RBP12.35□□□□□ -0.43
CCDC57-216ENST00000582885 HEPACAM2A8MVW5 462 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 HACD1B0YJ81 288 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 H3BQ06 376 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 RIOK3O14730 519 aaKnown RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 LIASO43766 372 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 ECI2O75521 394 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 CNTN5O94779 1100 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 CYBBP04839 570 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 ITGAVP06756 1048 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 PECAM1P16284 738 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 MX2P20592 715 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 KCNA5P22460 613 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 GBP2P32456 591 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 VIPR2P41587 438 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 IRAK1P51617 712 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 VCPP55072 806 aaKnown RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 YBEYP58557 167 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 LMNB2Q03252 620 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 GBE1Q04446 702 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 FCHO2Q0JRZ9 810 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 GALNT2Q10471 571 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 SLC10A2Q12908 348 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 BYSLQ13895 437 aaKnown RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 PDK1Q15118 436 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 OASLQ15646 514 aaKnown RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 LEXMQ3ZCV2 418 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 ZNF783Q6ZMS7 281 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 MTSS1LQ765P7 747 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 SETD3Q86TU7 594 aaPredicted RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 MFSD6LQ8IWD5 586 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 ADGRG2Q8IZP9 1017 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 TDRD5Q8NAT2 981 aaKnown RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 OSCP1Q8WVF1 389 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 MAGOHBQ96A72 148 aaKnown RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 MYEOVQ96EZ4 313 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 LRRC3BQ96PB8 259 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 THG1LQ9NWX6 298 aaKnown RBP12.34□□□□□ -0.43
CCDC57-216ENST00000582885 MARK1Q9P0L2 795 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 HEY1Q9Y5J3 304 aa12.34□□□□□ -0.43
CCDC57-216ENST00000582885 ANKRD36A6QL64 1941 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 C5orf42Q9H799 3197 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 EFCAB8A8MWE9 144 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 ANHXE9PGG2 379 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 MCF2LO15068 1137 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 MFSD11O43934 449 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 OR1E1P30953 314 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 COILP38432 576 aaPredicted RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 SGSHP51688 502 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 OXCT1P55809 520 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 EIF3EP60228 445 aaKnown RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 RPS24P62847 133 aaKnown RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 C2orf54Q08AI8 447 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 ZNF177Q13360 481 aaPredicted RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 PDGFRLQ15198 375 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 PUS10Q3MIT2 529 aaKnown RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 PARP15Q460N3 678 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 C6orf118Q5T5N4 469 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 TANGO2Q6ICL3 276 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 C1orf228Q6PIY5 440 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 CCDC137Q6PK04 289 aaKnown RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 NPNTQ6UXI9 565 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 ARHGAP12Q8IWW6 846 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 CFAP52Q8N1V2 620 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 NPWQ8N729 165 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 ZNF557Q8N988 423 aaPredicted RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 ATL2Q8NHH9 583 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 C1orf54Q8WWF1 131 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 IRF7Q92985 503 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 HAUS1Q96CS2 278 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 HDAC11Q96DB2 347 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 TSGA13Q96PP4 275 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 FAM83CQ9BQN1 747 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 DDX47Q9H0S4 455 aaKnown RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 MAGEH1Q9H213 219 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 SPHK2Q9NRA0 654 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 DUS2Q9NX74 493 aaKnown RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 SAE1Q9UBE0 346 aaPredicted RBP12.33□□□□□ -0.44
CCDC57-216ENST00000582885 MFHAS1Q9Y4C4 1052 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 COL4A2P08572 1712 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
CCDC57-216ENST00000582885 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
CCDC57-216ENST00000582885 ILVBLA1L0T0 632 aa12.32□□□□□ -0.44
CCDC57-216ENST00000582885 BCLAF3A2AJT9 711 aaKnown RBP12.32□□□□□ -0.44
CCDC57-216ENST00000582885 CFAP69A5D8W1 941 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms