RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TYRP14679 529 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 ARSAP15289 507 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 PRLRP16471 622 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 KDELR1P24390 212 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 IL4RP24394 825 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 EPHB2P29323 1055 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 CETN2P41208 172 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 CDKN2BP42772 138 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 SSR1P43307 286 aaKnown RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 CDH6P55285 790 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 TPI1P60174 286 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 ETF1P62495 437 aaKnown RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 DPYSL3Q14195 570 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 RPS6KA1Q15418 735 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 CA9Q16790 459 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 GAB4Q2WGN9 574 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 TFDP3Q5H9I0 405 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 ZNF569Q5MCW4 686 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 FAM72AQ5TYM5 149 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 TRIM68Q6AZZ1 485 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 FAM72DQ6L9T8 149 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 RFWD3Q6PCD5 774 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 RFX8Q6ZV50 586 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 NYAP1Q6ZVC0 841 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 KIAA0907Q7Z7F0 614 aaPredicted RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 C14orf80Q86SX3 495 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 RALGPS2Q86X27 583 aaPredicted RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 FAM72BQ86X60 149 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 RNF135Q8IUD6 432 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 GJD3Q8N144 294 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 PYROXD2Q8N2H3 581 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 RTL3Q8N8U3 475 aaKnown RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 KCTD6Q8NC69 237 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 FIBINQ8TAL6 211 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 HSPH1Q92598 858 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 KRT35Q92764 455 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 IGSF8Q969P0 613 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 CSPG4P5Q96PW8 444 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 XPO6Q96QU8 1125 aaKnown RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 KCTD15Q96SI1 283 aaPredicted RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 BBS2Q9BXC9 721 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 TLR10Q9BXR5 811 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 CWC15Q9P013 229 aaKnown RBP10.71□□□□□ -0.69
CCDC47-203ENST00000580986 STIM2Q9P246 746 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 WNT16Q9UBV4 365 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 HYOU1Q9Y4L1 999 aa10.71□□□□□ -0.69
CCDC47-203ENST00000580986 GOLGA6L7A0A1B0GV03 622 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 LRRD1A4D1F6 860 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 OTOL1A6NHN0 477 aaPredicted RBP10.7□□□□□ -0.7
CCDC47-203ENST00000580986 DCLK1O15075 740 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 KRT1P04264 644 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 ZFXP17010 805 aaPredicted RBP10.7□□□□□ -0.7
CCDC47-203ENST00000580986 GOT1P17174 413 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 GJA4P35212 333 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 SERPINB6P35237 376 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 ETFBP38117 255 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 MARCKSL1P49006 195 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 YBEYP58557 167 aaPredicted RBP10.7□□□□□ -0.7
CCDC47-203ENST00000580986 RPS24P62847 133 aaKnown RBP10.7□□□□□ -0.7
CCDC47-203ENST00000580986 PRKCQQ04759 706 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 KRT81Q14533 505 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 DMC1Q14565 340 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 E2F5Q15329 346 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 ATP13A4Q4VNC1 1196 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 ODF2Q5BJF6 829 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 PPP6R3Q5H9R7 873 aaPredicted RBP10.7□□□□□ -0.7
CCDC47-203ENST00000580986 C6orf118Q5T5N4 469 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 SLC9A4Q6AI14 798 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 LRRC49Q8IUZ0 686 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 CCDC117Q8IWD4 279 aaPredicted RBP10.7□□□□□ -0.7
CCDC47-203ENST00000580986 UMODL1-AS1Q8N2C9 162 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 SLC35F6Q8N357 371 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 DDI1Q8WTU0 396 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 RAPGEF5Q92565 580 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 ALG3Q92685 438 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 ZFYVE19Q96K21 471 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 RNF157Q96PX1 679 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 ARHGEF4Q9NR80 690 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 GPATCH2LQ9NWQ4 482 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 GTSE1Q9NYZ3 720 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 RAD54BQ9Y620 910 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 MYO10Q9HD67 2058 aa10.7□□□□□ -0.7
CCDC47-203ENST00000580986 VCANP13611 3396 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 hCG_1818297A0A087WSY0 165 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 A0A0A0MRY4 1105 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 ILVBLA1L0T0 632 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 NEDD8-MDP1E9PL57 170 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 CREB3O43889 395 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 TBL1XO60907 577 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 SRGAP2O75044 1071 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 TCP1P17987 556 aaKnown RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 ERCC2P18074 760 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 CTHP32929 405 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 SGSHP51688 502 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 NDST2P52849 883 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 PLK1P53350 603 aa10.69□□□□□ -0.7
CCDC47-203ENST00000580986 VCPP55072 806 aaKnown RBP10.69□□□□□ -0.7
CCDC47-203ENST00000580986 GNG11P61952 73 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms