RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SH2D4BQ5SQS7 431 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 CMC1Q7Z7K0 106 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 UNC93AQ86WB7 457 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 SHKBP1Q8TBC3 707 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 NLRP7Q8WX94 980 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 FAM149B1Q96BN6 582 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 P2RY11Q96G91 374 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ATXN7L3BQ96GX2 97 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 HAPLN3Q96S86 360 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 RBBP8Q99708 897 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 TLK1Q9UKI8 766 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 RLFQ13129 1914 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 A0A096LPK6 155 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 RGSL1A5PLK6 1076 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 TIMM44O43615 452 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 CLPTM1O96005 669 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ARF4P18085 180 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 TFE3P19532 575 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 RPL5P46777 297 aaKnown RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 HSPA13P48723 471 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 SULT1E1P49888 294 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 HK2P52789 917 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 PEX6Q13608 980 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 SH3D19Q5HYK7 790 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 OGFRL1Q5TC84 451 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 CES3Q6UWW8 571 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 CCDC185Q8N715 623 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ZNF781Q8N8C0 355 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 B4GALNT2Q8NHY0 566 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 CENPIQ92674 756 aaPredicted RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 DCUN1D1Q96GG9 259 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 MAN1C1Q9NR34 630 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 CAPN8A6NHC0 703 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 MFSD11O43934 449 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 IQCF3P0C7M6 154 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 TXNP10599 105 aaKnown RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ETS2P15036 469 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 PIK3R1P27986 724 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 LIMK2P53671 638 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ATXN1P54253 815 aaKnown RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 FAM131BQ86XD5 332 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 SNX32Q86XE0 403 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 TNS4Q8IZW8 715 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 AGR3Q8TD06 166 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ARNTL2Q8WYA1 636 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 DGCR14Q96DF8 476 aaKnown RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ZFRQ96KR1 1074 aaKnown RBP11.01□□□□□ -0.65
CCDC40-207ENST00000572253 EPB41L1Q9H4G0 881 aa11.01□□□□□ -0.65
CCDC40-207ENST00000572253 ZNF195O14628 629 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 C22orf31O95567 290 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 GLUD2P49448 558 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 PRKAA2P54646 552 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 ART3Q13508 389 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 CYLC2Q14093 348 aaPredicted RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 NOL9Q5SY16 702 aaKnown RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 SEL1L3Q68CR1 1132 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 ARHGAP17Q68EM7 881 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 RNF111Q6ZNA4 994 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 PSTKQ8IV42 348 aaKnown RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 BEST2Q8NFU1 509 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 RP9Q8TA86 221 aaKnown RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 LENG8Q96PV6 779 aaPredicted RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 NMRAL1Q9HBL8 299 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 MTMR10Q9NXD2 777 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 GOLGA8QA0A0J9YX86 632 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 GOLGA8OA6NCC3 632 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 GOLGA8NF8WBI6 632 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 CFLARO15519 480 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 SORBS2O94875 1100 aaKnown RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 PMLP29590 882 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 TTLL4Q14679 1199 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 KCTD2Q14681 263 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 SLC5A9Q2M3M2 681 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 SLC9B1Q4ZJI4 515 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 NXNQ6DKJ4 435 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 ANKRD52Q8NB46 1076 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 SCYL1Q96KG9 808 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 AGAP3Q96P47 875 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 CEP41Q9BYV8 373 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 ZNF358Q9NW07 568 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 IGSF9Q9P2J2 1179 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 THEGQ9P2T0 379 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 VANGL2Q9ULK5 521 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 RAB26Q9ULW5 256 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 G3BP2Q9UN86 482 aaKnown RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 NR2E3Q9Y5X4 410 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 NEMP1O14524 444 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 HDAC3O15379 428 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 AP1G1O43747 822 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 ZBTB14O43829 449 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 PEX10O60683 326 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 INSRRP14616 1297 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 CLCN2P51788 898 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 UGT2A3Q6UWM9 527 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 GADL1Q6ZQY3 521 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 SATL1Q86VE3 508 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 IFNLR1Q8IU57 520 aaPredicted RBP11□□□□□ -0.65
CCDC40-207ENST00000572253 TMEM126BQ8IUX1 230 aa11□□□□□ -0.65
CCDC40-207ENST00000572253 MARVELD2Q8N4S9 558 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms