RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CCDC78A2IDD5 438 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 B4E171 279 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 POP4O95707 220 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 POMCP01189 267 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 DDX6P26196 483 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMG1-217ENST00000569764 GBP1P32455 592 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 STX17P56962 302 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 UBXN2BQ14CS0 331 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CFAP221Q4G0U5 840 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CTXN3Q4LDR2 81 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 KRBOX4Q5JUW0 171 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 RARS2Q5T160 578 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 ERICH5Q6P6B1 374 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 KCNK18Q7Z418 384 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CAMKK1Q8N5S9 505 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 BANPQ8N9N5 519 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 PCYOX1LQ8NBM8 494 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 DENND1AQ8TEH3 1009 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 SYN2Q92777 582 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 EEF2KMTQ96G04 330 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 BPIFA3Q9BQP9 254 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 KCND1Q9NSA2 647 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 ACTR3BQ9P1U1 418 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 SORCS3Q9UPU3 1222 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CASP8AP2Q9UKL3 1982 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 ITIH6Q6UXX5 1313 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 MAGEB16A2A368 324 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 F8W810 466 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 DNAJB6O75190 326 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 SCAF4O95104 1147 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 SNAI1O95863 264 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 FTCDO95954 541 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CAPNS1P04632 268 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CDK4P11802 303 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 RPS2P15880 293 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 ALOX12P18054 663 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 TNNI1P19237 187 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 LMAN1P49257 510 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 ASIC1P78348 528 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 GRSF1Q12849 480 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMG1-217ENST00000569764 CAMK2DQ13557 499 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 AARDQ4LEZ3 155 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CXorf57Q6NSI4 855 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 KCNT2Q6UVM3 1135 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 NLRP9Q7RTR0 991 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 GPR149Q86SP6 731 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CDH26Q8IXH8 852 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CEP76Q8TAP6 659 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 ZUFSPQ96AP4 578 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 TMIGD2Q96BF3 282 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 GAL3ST1Q99999 423 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 DCLK3Q9C098 648 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 WDR12Q9GZL7 423 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 GORASP2Q9H8Y8 452 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 TRPV4Q9HBA0 871 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 ACTR10Q9NZ32 417 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 EPS15L1Q9UBC2 864 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 HMGXB4Q9UGU5 601 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 PADI3Q9ULW8 664 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 GDAQ9Y2T3 454 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CBY1Q9Y3M2 126 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CLUHO75153 1309 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 SOWAHBA6NEL2 793 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 NEMP1O14524 444 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 FANCGO15287 622 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 SULT1B1O43704 296 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 KLRC4O43908 158 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 SYNCRIPO60506 623 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 MYZAPP0CAP1 466 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 ZNF18P17022 549 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 JAK1P23458 1154 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 CD52P31358 61 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 NRIP1P48552 1158 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 SNRPFP62306 86 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 IFI35P80217 286 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 NRG1Q02297 640 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 CBX3Q13185 183 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 FRG1Q14331 258 aaKnown RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 EMC2Q15006 297 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 FBXO43Q4G163 708 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 TPGS2Q68CL5 300 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 RSPO2Q6UXX9 243 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 SERINC5Q86VE9 423 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 LRRC34Q8IZ02 419 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 ZBTB34Q8NCN2 500 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 PDZD8Q8NEN9 1154 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 ZNF397Q8NF99 534 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 BTN2A2Q8WVV5 523 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 POMGNT1Q8WZA1 660 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 EAF1Q96JC9 268 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 SENP1Q9P0U3 644 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 LCMT1Q9UIC8 334 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 ST3GAL5Q9UNP4 418 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 TRPM7Q96QT4 1865 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 RNF225M0QZC1 329 aaPredicted RBP6.83□□□□□ -1.32
SMG1-217ENST00000569764 ABLIM1O14639 778 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 B3GAT3O94766 335 aa6.83□□□□□ -1.32
SMG1-217ENST00000569764 APOEP02649 317 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms