RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	TMEM131	Q92545	1883 aa		7.15	□□□□□ -1.27
SF3B3-209	ENST00000567635	TP53BP1	Q12888	1972 aa	Predicted RBP	7.15	□□□□□ -1.27
SF3B3-209	ENST00000567635	CHD5	Q8TDI0	1954 aa		7.15	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	METTL12	A8MUP2	240 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635		M0QYT0	321 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	RNASEH1	O60930	286 aa	Known RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	PAGE1	O75459	146 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	DAB1	O75553	588 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	GFPT2	O94808	682 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	MME	P08473	750 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	C7	P10643	843 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	GNS	P15586	552 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZNF18	P17022	549 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	ENG	P17813	658 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	SOX5	P35711	763 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	SCNN1A	P37088	669 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	CXCR3	P49682	368 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	KLK7	P49862	253 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	PLK1	P53350	603 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	OXCT1	P55809	520 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	RPS14	P62263	151 aa	Known RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	ECT2L	Q008S8	904 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	MYL5	Q02045	173 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZBTB16	Q05516	673 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	SULT2A1	Q06520	285 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZNF177	Q13360	481 aa	Predicted RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	AUH	Q13825	339 aa	Known RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	ARID5B	Q14865	1188 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	UAP1L1	Q3KQV9	507 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	SLC25A52	Q3SY17	297 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	PITRM1	Q5JRX3	1037 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	FAM102A	Q5T9C2	384 aa	Predicted RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	FBXL22	Q6P050	247 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	MMS22L	Q6ZRQ5	1243 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	FAM124A	Q86V42	546 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZNF677	Q86XU0	584 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	XYLT1	Q86Y38	959 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	RGL4	Q8IZJ4	473 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	APCDD1	Q8J025	514 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	MSANTD4	Q8NCY6	345 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	NEK11	Q8NG66	645 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	CPA5	Q8WXQ8	436 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	DNASE2B	Q8WZ79	361 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	NT5C3B	Q969T7	300 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	PCDH15	Q96QU1	1955 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	NPY6R	Q99463	290 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	GPR174	Q9BXC1	333 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	NAT10	Q9H0A0	1025 aa	Known RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	SIK2	Q9H0K1	926 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	PCED1A	Q9H1Q7	454 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	NLRC4	Q9NPP4	1024 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	CD93	Q9NPY3	652 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	FAM207A	Q9NSI2	230 aa	Predicted RBP	7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	SUSD2	Q9UGT4	822 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	SLCO3A1	Q9UIG8	710 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	STAP1	Q9ULZ2	295 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	SIK3	Q9Y2K2	1263 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	DAAM1	Q9Y4D1	1078 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	PAXBP1	Q9Y5B6	917 aa		7.14	□□□□□ -1.27
SF3B3-209	ENST00000567635	CACNA1B	Q00975	2339 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	ATXN2	Q99700	1313 aa	Known RBP	7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	CHD8	Q9HCK8	2581 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	EDDM13	A0A1B0GTR0	161 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635		A0A1B0GVM2	712 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	TARSL2	A2RTX5	802 aa	Known RBP	7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	TCAF2	A6NFQ2	919 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	LGALS16	A8MUM7	142 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	MEI4	A8MW99	385 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	TTC34	A8MYJ7	566 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	GOLGA8S	H3BPF8	625 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	ARHGAP33	O14559	1287 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	SIN3B	O75182	1162 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	KCNK5	O95279	499 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	ADCY5	O95622	1261 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	DNTT	P04053	509 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	SYP	P08247	313 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	ADRB1	P08588	477 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	CHRNB2	P17787	502 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	TFE3	P19532	575 aa	Predicted RBP	7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	MAOB	P27338	520 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	NNMT	P40261	264 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	STAT1	P42224	750 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	CTSO	P43234	321 aa	Predicted RBP	7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	JAM2	P57087	298 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	NOMO3	P69849	1222 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	CDR2	Q01850	454 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	UBXN1	Q04323	297 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	DEUP1	Q05D60	604 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	TYRO3	Q06418	890 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	SFSWAP	Q12872	951 aa	Known RBP	7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	SYCP1	Q15431	976 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	HNRNPA1L2	Q32P51	320 aa	Known RBP	7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	PLEKHG6	Q3KR16	790 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	BRMS1L	Q5PSV4	323 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	C9orf64	Q5T6V5	341 aa		7.13	□□□□□ -1.27
SF3B3-209	ENST00000567635	ACBD5	Q5T8D3	534 aa	Predicted RBP	7.13	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms