RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 CCDC185Q8N715 623 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 MDGA1Q8NFP4 955 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 CYB5D2Q8WUJ1 264 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 NTAN1Q96AB6 310 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 OSBPL2Q9H1P3 480 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 EPC1Q9H2F5 836 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 MRPL47Q9HD33 250 aaKnown RBP22.3■■□□□ 1.16
NME3-210ENST00000567271 NENFQ9UMX5 172 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 PLA2G4CQ9UP65 541 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 RAD54BQ9Y620 910 aa22.3■■□□□ 1.16
NME3-210ENST00000567271 IGLV3-10A0A075B6K4 115 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.29■■□□□ 1.16
NME3-210ENST00000567271 TCRBV21S2A2A0A5A6 115 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 AKR1B15C9JRZ8 316 aaPredicted RBP22.29■■□□□ 1.16
NME3-210ENST00000567271 SRGAP2O75044 1071 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 ATP5BP06576 529 aaKnown RBP22.29■■□□□ 1.16
NME3-210ENST00000567271 CSKP41240 450 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 ZNF75DP51815 510 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 OXCT1P55809 520 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 SRSF5Q13243 272 aaKnown RBP22.29■■□□□ 1.16
NME3-210ENST00000567271 ZNF177Q13360 481 aaPredicted RBP22.29■■□□□ 1.16
NME3-210ENST00000567271 MAPK8IP2Q13387 824 aaPredicted RBP22.29■■□□□ 1.16
NME3-210ENST00000567271 SLC12A1Q13621 1099 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 ASTE1Q2TB18 679 aaPredicted RBP22.29■■□□□ 1.16
NME3-210ENST00000567271 PITRM1Q5JRX3 1037 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 CCDC122Q5T0U0 273 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 CXorf57Q6NSI4 855 aaKnown RBP22.29■■□□□ 1.16
NME3-210ENST00000567271 KIAA1211LQ6NV74 962 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 CNGA4Q8IV77 575 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 SUMF1Q8NBK3 374 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 MYO1AQ9UBC5 1043 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 TBC1D30Q9Y2I9 924 aa22.29■■□□□ 1.16
NME3-210ENST00000567271 SSU72P8A0A1W2PR75 194 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 MOCS3O95396 460 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 LMNAP02545 664 aaKnown RBP22.28■■□□□ 1.16
NME3-210ENST00000567271 DESP17661 470 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 PSMA2P25787 234 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 PLK1P53350 603 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 NRG1Q02297 640 aaPredicted RBP22.28■■□□□ 1.16
NME3-210ENST00000567271 GFPT1Q06210 699 aaPredicted RBP22.28■■□□□ 1.16
NME3-210ENST00000567271 PLEKHG6Q3KR16 790 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 ALFQ53S48 1182 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 SCYL2Q6P3W7 929 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 SERPINA13PQ6UXR4 307 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 SLFN11Q7Z7L1 901 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 APCDD1Q8J025 514 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 FNIP1Q8TF40 1166 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 HMGB4Q8WW32 186 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 GAB3Q8WWW8 586 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 MRFAP1L1Q96HT8 127 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 TRIM7Q9C029 511 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 THAP2Q9H0W7 228 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 TMEM245Q9H330 911 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 MPP6Q9NZW5 540 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 PPARGC1AQ9UBK2 798 aaKnown RBP22.28■■□□□ 1.16
NME3-210ENST00000567271 OR12D3Q9UGF7 316 aa22.28■■□□□ 1.16
NME3-210ENST00000567271 PRR23AA6NEV1 266 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 ASLP04424 464 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 GABRG2P18507 467 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 PRKCHP24723 683 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 MZF1P28698 734 aaPredicted RBP22.27■■□□□ 1.16
NME3-210ENST00000567271 MRE11P49959 708 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 ZNF252P-AS1Q0IIN9 211 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 SCAPQ12770 1279 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 STARD3Q14849 445 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 SLC18A3Q16572 532 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 FNDC3BQ53EP0 1204 aaKnown RBP22.27■■□□□ 1.16
NME3-210ENST00000567271 ASCL5Q7RTU5 278 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 OR52K2Q8NGK3 314 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 ERLEC1Q96DZ1 483 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 CHP1Q99653 195 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 ANP32EQ9BTT0 268 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 MAGEB5Q9BZ81 275 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 TPSD1Q9BZJ3 242 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 BCCIPQ9P287 314 aaKnown RBP eCLIP22.27■■□□□ 1.16
NME3-210ENST00000567271 PIEZO1Q92508 2521 aa22.27■■□□□ 1.16
NME3-210ENST00000567271 RPP40O75818 363 aaKnown RBP22.26■■□□□ 1.15
NME3-210ENST00000567271 SIM2Q14190 667 aaPredicted RBP22.26■■□□□ 1.15
NME3-210ENST00000567271 MANEALQ5VSG8 457 aa22.26■■□□□ 1.15
NME3-210ENST00000567271 ALG14Q96F25 216 aa22.26■■□□□ 1.15
NME3-210ENST00000567271 MRGPRX3Q96LB0 322 aa22.26■■□□□ 1.15
NME3-210ENST00000567271 PPP1R9BQ96SB3 815 aa22.26■■□□□ 1.15
NME3-210ENST00000567271 FEM1AQ9BSK4 669 aa22.26■■□□□ 1.15
NME3-210ENST00000567271 ZYG11BQ9C0D3 744 aa22.26■■□□□ 1.15
NME3-210ENST00000567271 FAM72CH0Y354 149 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 SYNCRIPO60506 623 aaKnown RBP22.25■■□□□ 1.15
NME3-210ENST00000567271 CYP1A2P05177 515 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 EPHX1P07099 455 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 HLA-EP13747 358 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 CTSOP43234 321 aaPredicted RBP22.25■■□□□ 1.15
NME3-210ENST00000567271 GALCP54803 685 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 AIF1P55008 147 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 USP39Q53GS9 565 aaKnown RBP22.25■■□□□ 1.15
NME3-210ENST00000567271 FAM72AQ5TYM5 149 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 FAM72DQ6L9T8 149 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 SETD3Q86TU7 594 aaPredicted RBP22.25■■□□□ 1.15
NME3-210ENST00000567271 ALYREFQ86V81 257 aaKnown RBP22.25■■□□□ 1.15
NME3-210ENST00000567271 FAM72BQ86X60 149 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 PGBD3Q8N328 593 aa22.25■■□□□ 1.15
NME3-210ENST00000567271 ARFGAP1Q8N6T3 406 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms