RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CAMK2GQ13555 558 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-211ENST00000565922 PLEKHG6Q3KR16 790 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 ARL13BQ3SXY8 428 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 C5orf22Q49AR2 442 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 FSCBQ5H9T9 825 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 SFMBT2Q5VUG0 894 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 MON1BQ7L1V2 547 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 BNIPLQ7Z465 357 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 IRF2BP2Q7Z5L9 587 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 TMPRSS6Q8IU80 811 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 OR2T3Q8NH03 318 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 SIPA1Q96FS4 1042 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 C1orf74Q96LT6 269 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 HAPLN3Q96S86 360 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 AIPL1Q9NZN9 384 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 IGHV1OR15-9A0A0B4J2B8 117 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 BCLAF3A2AJT9 711 aaKnown RBP20.47■□□□□ 0.87
CMTM3-211ENST00000565922 NDUFS2O75306 463 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 ENDOD1O94919 500 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 ADCY5O95622 1261 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 HLA-EP13747 358 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 PDGFRAP16234 1089 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 NNMTP40261 264 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 PTPN9P43378 593 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 RPL6Q02878 288 aaKnown RBP20.47■□□□□ 0.87
CMTM3-211ENST00000565922 PLA2G2CQ5R387 149 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 STRADAQ7RTN6 431 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 EMC1Q8N766 993 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 RXFP2Q8WXD0 754 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 ERLEC1Q96DZ1 483 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 ADAM33Q9BZ11 813 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 MKRN2Q9H000 416 aaKnown RBP20.47■□□□□ 0.87
CMTM3-211ENST00000565922 MBD1Q9UIS9 605 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-211ENST00000565922 INTS6Q9UL03 887 aaKnown RBP20.47■□□□□ 0.87
CMTM3-211ENST00000565922 CYP8B1Q9UNU6 501 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 PI4KAP42356 2102 aa20.47■□□□□ 0.87
CMTM3-211ENST00000565922 C2CD4BA6NLJ0 364 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 OXTRP30559 389 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 PRKCIP41743 596 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 COPAP53621 1224 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 ATP11AP98196 1134 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 ECT2LQ008S8 904 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 CDO1Q16878 200 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 ACAD10Q6JQN1 1059 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 TRNP1Q6NT89 227 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 DNAJC24Q6P3W2 148 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 CIR1Q86X95 450 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-211ENST00000565922 FAM131BQ86XD5 332 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 NETO1Q8TDF5 533 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 IGSF8Q969P0 613 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 VCPIP1Q96JH7 1222 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 TTYH3Q9C0H2 523 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 USP36Q9P275 1121 aaKnown RBP20.46■□□□□ 0.87
CMTM3-211ENST00000565922 CDV3Q9UKY7 258 aaKnown RBP20.46■□□□□ 0.87
CMTM3-211ENST00000565922 ERVW-1Q9UQF0 538 aa20.46■□□□□ 0.87
CMTM3-211ENST00000565922 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 SIGLEC16A6NMB1 481 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 GPD1P21695 349 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 PLK1P53350 603 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 ZBTB16Q05516 673 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 PUM1Q14671 1186 aaKnown RBP eCLIP20.45■□□□□ 0.86
CMTM3-211ENST00000565922 ARID5BQ14865 1188 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 AASDHQ4L235 1098 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-211ENST00000565922 LYSMD4Q5XG99 296 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 TMEFF1Q8IYR6 380 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 SLC6A17Q9H1V8 727 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 ITM2CQ9NQX7 267 aa20.45■□□□□ 0.86
CMTM3-211ENST00000565922 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.45■□□□□ 0.86
CMTM3-211ENST00000565922 A0A1W2PQJ5 194 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 C7P10643 843 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 CD6P30203 668 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 HOXD12P35452 270 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 GGCXP38435 758 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 ATXN1P54253 815 aaKnown RBP20.44■□□□□ 0.86
CMTM3-211ENST00000565922 KLHL30Q0D2K2 578 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 SFSWAPQ12872 951 aaKnown RBP20.44■□□□□ 0.86
CMTM3-211ENST00000565922 HNRNPA1L2Q32P51 320 aaKnown RBP20.44■□□□□ 0.86
CMTM3-211ENST00000565922 CCDC14Q49A88 953 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 TTC31Q49AM3 519 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-211ENST00000565922 CXorf57Q6NSI4 855 aaKnown RBP20.44■□□□□ 0.86
CMTM3-211ENST00000565922 LRSAM1Q6UWE0 723 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 PHLDB2Q86SQ0 1253 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 C14orf80Q86SX3 495 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 SETD3Q86TU7 594 aaPredicted RBP20.44■□□□□ 0.86
CMTM3-211ENST00000565922 MCOLN2Q8IZK6 566 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 APCDD1Q8J025 514 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 FRMD1Q8N878 549 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 ZNF366Q8N895 744 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 JOSD2Q8TAC2 188 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 FOXJ1Q92949 421 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 MYO19Q96H55 970 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 SYT11Q9BT88 431 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 HAUS4Q9H6D7 363 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 PRSS16Q9NQE7 514 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 SLC25A13Q9UJS0 675 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 TBC1D30Q9Y2I9 924 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 WDR87Q6ZQQ6 2873 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 ITIH6Q6UXX5 1313 aa20.44■□□□□ 0.86
CMTM3-211ENST00000565922 IGLV3-10A0A075B6K4 115 aa20.43■□□□□ 0.86
CMTM3-211ENST00000565922 EDDM13A0A1B0GTR0 161 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms