RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 FMN2Q9NZ56 1722 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 PARP4Q9UKK3 1724 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 LMO7Q8WWI1 1683 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 XDHP47989 1333 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ADGRA3Q8IWK6 1321 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 PCDH11YQ9BZA8 1340 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 A0A0U1RQJ8 604 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ANKRD62A6NC57 917 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 LRRC53A6NM62 1247 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 TCP11X1B4DZS4 312 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ALG1L2C9J202 215 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 H3BNX3 289 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 K7ESF4 209 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ZNF263O14978 683 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 RNMTO43148 476 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 PRPF4O43172 522 aaKnown RBP eCLIP5.82□□□□□ -1.483e-7■■□□□ 12.9
CHD9-210ENST00000564582 ATP9AO75110 1047 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ZBED4O75132 1171 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ALDH1A2O94788 518 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 LY86O95711 162 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 IL1BP01584 269 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 IGKV5-2P06315 115 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 HNRNPCP07910 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
CHD9-210ENST00000564582 LYNP07948 512 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ADRB1P08588 477 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ABHD2P08910 425 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 SNRPA1P09661 255 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 ZNF12P17014 697 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 POLR2EP19388 210 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 CRABP2P29373 138 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ADD2P35612 726 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 RAP1GDS1P52306 607 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ADARP55265 1226 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 NUP107P57740 925 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ADAM17P78536 824 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 RIPPLY1Q0D2K3 151 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 DUSP8Q13202 625 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 TRIM25Q14258 630 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 MIIPQ5JXC2 388 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 FAM83BQ5T0W9 1011 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 GJC2Q5T442 439 aaPredicted RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 ZNF585AQ6P3V2 769 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 FAM180AQ6UWF9 173 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 LRRC74BQ6ZQY2 392 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 FRA10AC1Q70Z53 315 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 GAREM2Q75VX8 874 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 NET1Q7Z628 596 aaPredicted RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 DAAM2Q86T65 1068 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 LONP2Q86WA8 852 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 TDRPQ86YL5 185 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 TMPRSS6Q8IU80 811 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 MAP7D3Q8IWC1 876 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 GPR135Q8IZ08 494 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 SYCP3Q8IZU3 236 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 KIRREL3Q8IZU9 778 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 VPS52Q8N1B4 723 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 NUP93Q8N1F7 819 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 FITM2Q8N6M3 262 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ATP11CQ8NB49 1132 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 NGDNQ8NEJ9 315 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 CCDC110Q8TBZ0 833 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 AUTS2Q8WXX7 1259 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 LPIN2Q92539 896 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ARHGEF2Q92974 986 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 PHKBQ93100 1093 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 MTMR8Q96EF0 704 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 SGF29Q96ES7 293 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 HES6Q96HZ4 224 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 EPSTI1Q96J88 318 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 TGS1Q96RS0 853 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 TCF25Q9BQ70 676 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 HAUS8Q9BT25 410 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 MENTQ9BUN1 341 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 TBC1D10AQ9BXI6 508 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 MAF1Q9H063 256 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 BRD8Q9H0E9 1235 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 MLXIPQ9HAP2 919 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 C17orf75Q9HAS0 396 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 IL23AQ9NPF7 189 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 ABCF3Q9NUQ8 709 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 GIN1Q9NXP7 522 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 NCDNQ9UBB6 729 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 EVLQ9UI08 416 aaPredicted RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 HERC5Q9UII4 1024 aaKnown RBP5.82□□□□□ -1.48
CHD9-210ENST00000564582 EDARQ9UNE0 448 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 TBC1D30Q9Y2I9 924 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 COL4A3BPQ9Y5P4 624 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 SQORQ9Y6N5 450 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 LAMA4Q16363 1823 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 KDM3BQ7LBC6 1761 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 USP54Q70EL1 1684 aa5.82□□□□□ -1.48
CHD9-210ENST00000564582 TMEM120BA0PK00 339 aa5.81□□□□□ -1.48
CHD9-210ENST00000564582 FAM47DPA6NHR8 397 aa5.81□□□□□ -1.48
CHD9-210ENST00000564582 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
CHD9-210ENST00000564582 SPECC1L-ADORA2AF8WAN1 911 aa5.81□□□□□ -1.48
CHD9-210ENST00000564582 hCG_1984214I3L0E3 225 aa5.81□□□□□ -1.48
CHD9-210ENST00000564582 ZNF701M0R085 212 aaPredicted RBP5.81□□□□□ -1.48
CHD9-210ENST00000564582 ATP2A1O14983 1001 aa5.81□□□□□ -1.48
CHD9-210ENST00000564582 AREL1O15033 823 aa5.81□□□□□ -1.48
CHD9-210ENST00000564582 MUSKO15146 869 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms