RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CDK5RAP1Q96SZ6 601 aaKnown RBP10.07□□□□□ -0.8
UBFD1-203ENST00000564106 SEPT5Q99719 369 aaPredicted RBP10.07□□□□□ -0.8
UBFD1-203ENST00000564106 FAM204AQ9H8W3 233 aa10.07□□□□□ -0.8
UBFD1-203ENST00000564106 TRPV4Q9HBA0 871 aa10.07□□□□□ -0.8
UBFD1-203ENST00000564106 ZFP14Q9HCL3 533 aa10.07□□□□□ -0.8
UBFD1-203ENST00000564106 OLA1Q9NTK5 396 aaKnown RBP10.07□□□□□ -0.8
UBFD1-203ENST00000564106 TMEM30AQ9NV96 361 aa10.07□□□□□ -0.8
UBFD1-203ENST00000564106 MAFFQ9ULX9 164 aa10.07□□□□□ -0.8
UBFD1-203ENST00000564106 SCML2Q9UQR0 700 aa10.07□□□□□ -0.8
UBFD1-203ENST00000564106 CCL26Q9Y258 94 aa10.07□□□□□ -0.8
UBFD1-203ENST00000564106 KIAA1549LQ6ZVL6 1849 aa10.07□□□□□ -0.8
UBFD1-203ENST00000564106 CFAP69A5D8W1 941 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 SLC38A8A6NNN8 435 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 H3BRJ5 948 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 HAPLN1P10915 354 aaPredicted RBP10.06□□□□□ -0.8
UBFD1-203ENST00000564106 HTR7P34969 479 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 NR2C2P49116 596 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 ARSEP51690 589 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 BRMS1LQ5PSV4 323 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 GPR158Q5T848 1215 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 BSPRYQ5W0U4 402 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 TTC27Q6P3X3 843 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 PKN3Q6P5Z2 889 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 DENND5BQ6ZUT9 1274 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 MREGQ8N565 214 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 PDZD8Q8NEN9 1154 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 C1orf54Q8WWF1 131 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 CASKIN2Q8WXE0 1202 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 NELL1Q92832 810 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 FAF2Q96CS3 445 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 SNF8Q96H20 258 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 SERPINB11Q96P15 392 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 SLC22A12Q96S37 553 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 FMO2Q99518 471 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 FERMT1Q9BQL6 677 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 TRMT61BQ9BVS5 477 aaKnown RBP10.06□□□□□ -0.8
UBFD1-203ENST00000564106 SLC46A2Q9BY10 475 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 DHX35Q9H5Z1 703 aaKnown RBP10.06□□□□□ -0.8
UBFD1-203ENST00000564106 BRD9Q9H8M2 597 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 PCDH18Q9HCL0 1135 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 PRMT8Q9NR22 394 aaPredicted RBP10.06□□□□□ -0.8
UBFD1-203ENST00000564106 SPATA6Q9NWH7 488 aaPredicted RBP10.06□□□□□ -0.8
UBFD1-203ENST00000564106 DDIT4Q9NX09 232 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 GTSE1Q9NYZ3 720 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 CLIC5Q9NZA1 410 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 WHRNQ9P202 907 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 ASIC3Q9UHC3 531 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 FZD10Q9ULW2 581 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 NFU1Q9UMS0 254 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 ZNF148Q9UQR1 794 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 PIAS3Q9Y6X2 628 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 NCOR2Q9Y618 2525 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 EML5Q05BV3 1969 aa10.06□□□□□ -0.8
UBFD1-203ENST00000564106 HELZP42694 1942 aaKnown RBP10.05□□□□□ -0.8
UBFD1-203ENST00000564106 ESYT3A0FGR9 886 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 FAM92AA1XBS5 289 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 SMAPO00193 183 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 ZNF197O14709 1029 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 DAPK3O43293 454 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 SLC2A3P11169 496 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 CHRNB1P11230 501 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 PSMC3P17980 439 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 ITIH2P19823 946 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 STIP1P31948 543 aaKnown RBP10.05□□□□□ -0.8
UBFD1-203ENST00000564106 L1CAMP32004 1257 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 CARSP49589 748 aaKnown RBP10.05□□□□□ -0.8
UBFD1-203ENST00000564106 EPHB3P54753 998 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 OTUD4Q01804 1114 aaKnown RBP10.05□□□□□ -0.8
UBFD1-203ENST00000564106 SATB1Q01826 763 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 CSTF1Q05048 431 aaKnown RBP10.05□□□□□ -0.8
UBFD1-203ENST00000564106 NME3Q13232 169 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 SNX1Q13596 522 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 CASP8Q14790 479 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 DDR2Q16832 855 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 MGAT5BQ3V5L5 792 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 ANKRD20A8PQ5CZ79 823 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 PPP6R3Q5H9R7 873 aaPredicted RBP10.05□□□□□ -0.8
UBFD1-203ENST00000564106 SPDYCQ5MJ68 293 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 SYPL2Q5VXT5 272 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 SLC9A4Q6AI14 798 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 TRIM68Q6AZZ1 485 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 C4orf22Q6V702 233 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 BHLHA9Q7RTU4 235 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 TADA2BQ86TJ2 420 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 FAM131BQ86XD5 332 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 MFSD6LQ8IWD5 586 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 SLC35B2Q8TB61 432 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 ACTL9Q8TC94 416 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 ATG4AQ8WYN0 398 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 OVCA2Q8WZ82 227 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 DNASE1L2Q92874 299 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 HERPUD2Q9BSE4 406 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 TRIM51Q9BSJ1 452 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 FUT8Q9BYC5 575 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 FOXP3Q9BZS1 431 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 ATXN3LQ9H3M9 355 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 WDCPQ9H6R7 721 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 PCDH9Q9HC56 1237 aa10.05□□□□□ -0.8
UBFD1-203ENST00000564106 TLR8Q9NR97 1041 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms