RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 KMT5AQ9NQR1 393 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 PIH1D1Q9NWS0 290 aaKnown RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 ZNF701M0R085 212 aaPredicted RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 SOCS2O14508 198 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 HLA-DOAP06340 250 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 C8BP07358 591 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 YWHABP31946 246 aaKnown RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 SERPINB9P50453 376 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 NEK2P51955 445 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 SNX29P2Q8IUI4 249 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 CADM3Q8N126 398 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 PCYOX1LQ8NBM8 494 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 RP9Q8TA86 221 aaKnown RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TMEM174Q8WUU8 243 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 CLIP3Q96DZ5 547 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 ANKRD36BP1Q96IX9 119 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TJP2Q9UDY2 1190 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 CCPG1Q9ULG6 757 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 FAM159BA6NKW6 160 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 PFDN6O15212 129 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 TIPRLO75663 272 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 NDUFB10O96000 172 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 CAPNS1P04632 268 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 MX2P20592 715 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 GRIA1P42261 906 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 SCNN1DP51172 638 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 LSM12Q3MHD2 195 aaKnown RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 XKR9Q5GH70 373 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 SCARA3Q6AZY7 606 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 NAPRTQ6XQN6 538 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 EEPD1Q7L9B9 569 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 BTLAQ7Z6A9 289 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 THNSL1Q8IYQ7 743 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 ACDQ96AP0 544 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 CGREF1Q99674 301 aa12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 MTG1Q9BT17 334 aaPredicted RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 UTP6Q9NYH9 597 aaKnown RBP12.63□□□□□ -0.39
SCAMP2-204ENST00000563829 IQCA1LA6NCM1 817 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 KPNA4O00629 521 aaPredicted RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 GDF11O95390 407 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 NAT1P18440 290 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 TYK2P29597 1187 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 HARS2P49590 506 aaKnown RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 KCNC4Q03721 635 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 RALGDSQ12967 914 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 DMP1Q13316 513 aaPredicted RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 ZNF618Q5T7W0 954 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 GPAT2Q6NUI2 795 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 KRT27Q7Z3Y8 459 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 MAP4K3Q8IVH8 894 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 TRUB1Q8WWH5 349 aaKnown RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 HGH1Q9BTY7 390 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 FRMD8P1Q9BZ68 369 aaPredicted RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 EFCAB1Q9HAE3 211 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 DUS2Q9NX74 493 aaKnown RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 RBAKQ9NYW8 714 aaPredicted RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 DCDC2Q9UHG0 476 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 GAKO14976 1311 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 AKAP10O43572 662 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 S100BP04271 92 aaPredicted RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 KRT3P12035 628 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 GLDCP23378 1020 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 RBL1P28749 1068 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 YAP1P46937 504 aaKnown RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 CACNB3P54284 484 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 NLRP11P59045 1033 aaKnown RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 SNRPFP62306 86 aaKnown RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 NHSL2Q5HYW2 709 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 XPNPEP3Q9NQH7 507 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 SCHIP1Q9P0W5 487 aaPredicted RBP12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 SFMBT1Q9UHJ3 866 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 SPO11Q9Y5K1 396 aa12.62□□□□□ -0.39
SCAMP2-204ENST00000563829 A6NL46 340 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 EIF3FO00303 357 aaPredicted RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 VNN1O95497 513 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CHRNGP07510 517 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 F7P08709 466 aaPredicted RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 NFIAQ12857 509 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 NFATC3Q12968 1075 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 ZACNQ401N2 412 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CMC1Q7Z7K0 106 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CYGBQ8WWM9 190 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 SMOXQ9NWM0 555 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 PAK5Q9P286 719 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 PCDHB12Q9Y5F1 795 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 PSAT1Q9Y617 370 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 TCRBV5S1A1TA0A578 114 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CCDC162PA2VCL2 907 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 BCL10O95999 233 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 PRKCGP05129 697 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 DCKP27707 260 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CCR10P46092 362 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 RPS6P62753 249 aaKnown RBP12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 CAMK2BQ13554 666 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 BSPRYQ5W0U4 402 aa12.61□□□□□ -0.39
SCAMP2-204ENST00000563829 KCTD8Q6ZWB6 473 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms