RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 FAM221BA6H8Z2 402 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 TMEM8BA6NDV4 472 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 TTC34A8MYJ7 566 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 F5H5T6 163 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 CBFA2T3O75081 653 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 FSBPO95073 299 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 CD27P26842 260 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 MTIF2P46199 727 aaKnown RBP16.76■□□□□ 0.27
SNX1-213ENST00000561026 PTK2Q05397 1052 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 EFHC1Q5JVL4 640 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 DBX2Q6ZNG2 339 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 RAB44Q7Z6P3 723 aaPredicted RBP16.76■□□□□ 0.27
SNX1-213ENST00000561026 PASD1Q8IV76 773 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 DHX40Q8IX18 779 aaKnown RBP16.76■□□□□ 0.27
SNX1-213ENST00000561026 APCDD1Q8J025 514 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 DEFB106AQ8N104 65 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 CHCHD4Q8N4Q1 142 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 GANCQ8TET4 914 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 FAM204AQ9H8W3 233 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 TM9SF3Q9HD45 589 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 SIX2Q9NPC8 291 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 TM7SF3Q9NS93 570 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 DDIT4Q9NX09 232 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 FBXL12Q9NXK8 326 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 SLCO3A1Q9UIG8 710 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 PCOLCE2Q9UKZ9 415 aa16.76■□□□□ 0.27
SNX1-213ENST00000561026 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 FOXN3O00409 490 aaPredicted RBP16.75■□□□□ 0.27
SNX1-213ENST00000561026 HSF2BPO75031 334 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 ABCB4P21439 1286 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 CCR1P32246 355 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 GRIA4P48058 902 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 SFSWAPQ12872 951 aaKnown RBP16.75■□□□□ 0.27
SNX1-213ENST00000561026 SLC12A1Q13621 1099 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 TEAD4Q15561 434 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 CST6Q15828 149 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 KIF19Q2TAC6 998 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 GLRX5Q86SX6 157 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 MMAAQ8IVH4 418 aaKnown RBP16.75■□□□□ 0.27
SNX1-213ENST00000561026 NOX5Q96PH1 765 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 FAM129BQ96TA1 746 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 ORAI3Q9BRQ5 295 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 SERGEFQ9UGK8 458 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 DNAJC12Q9UKB3 198 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 AJAP1Q9UKB5 411 aaPredicted RBP16.75■□□□□ 0.27
SNX1-213ENST00000561026 ANKRD6Q9Y2G4 727 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 CEP83Q9Y592 693 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 PCDHGB2Q9Y5G2 931 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 SNX11Q9Y5W9 270 aa16.75■□□□□ 0.27
SNX1-213ENST00000561026 CABIN1Q9Y6J0 2220 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 EDDM13A0A1B0GTR0 161 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 MID1O15344 667 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 GRAP2O75791 330 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 IGHV4-34P06331 123 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 FTH1P19P0C7X4 201 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 CLCN1P35523 988 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 KRT9P35527 623 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 PLK1P53350 603 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 GALCP54803 685 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 SNX16P57768 344 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 MAN2A1Q16706 1144 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
SNX1-213ENST00000561026 TTC39BQ5VTQ0 682 aaPredicted RBP16.74■□□□□ 0.27
SNX1-213ENST00000561026 RNF219Q5W0B1 726 aaPredicted RBP16.74■□□□□ 0.27
SNX1-213ENST00000561026 KIAA0895LQ68EN5 471 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 OLFML1Q6UWY5 402 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 C11orf57Q6ZUT1 292 aaPredicted RBP16.74■□□□□ 0.27
SNX1-213ENST00000561026 SLC47A2Q86VL8 602 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 CCAR2Q8N163 923 aaKnown RBP16.74■□□□□ 0.27
SNX1-213ENST00000561026 SETD7Q8WTS6 366 aaKnown RBP16.74■□□□□ 0.27
SNX1-213ENST00000561026 RNF34Q969K3 372 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 RPL10LQ96L21 214 aaKnown RBP16.74■□□□□ 0.27
SNX1-213ENST00000561026 NEUROG2Q9H2A3 272 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 DMXL2Q8TDJ6 3036 aa16.74■□□□□ 0.27
SNX1-213ENST00000561026 FREM2Q5SZK8 3169 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 SYNJ2BP-COX16A0A087WUM0 186 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 A0A1B0GVM2 712 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 A0A1W2PP55 124 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 TCAF2A6NFQ2 919 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 FAM47DPA6NHR8 397 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 ERBB2P04626 1255 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 SLC8A1P32418 973 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 NNMTP40261 264 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 SULT2A1Q06520 285 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 MTA1Q13330 715 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 RABGAP1LQ5R372 815 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 OR6B2Q6IFH4 312 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 FBXL22Q6P050 247 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 NCEH1Q6PIU2 408 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 FAM183BPQ6ZVS7 135 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 CIR1Q86X95 450 aaPredicted RBP16.73■□□□□ 0.27
SNX1-213ENST00000561026 FAM71AQ8IYT1 594 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 PNPLA1Q8N8W4 532 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 C1orf131Q8NDD1 294 aaKnown RBP16.73■□□□□ 0.27
SNX1-213ENST00000561026 ADAMTS14Q8WXS8 1223 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 PTPRN2Q92932 1015 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 OMDQ99983 421 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 CLSTN2Q9H4D0 955 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 CHMP5Q9NZZ3 219 aa16.73■□□□□ 0.27
SNX1-213ENST00000561026 COX16Q9P0S2 106 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms